Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s878_g03165
Locus habu1_scaffold878 : 2705884 ... 2716010 : -
To GenomeBrowser habu1_scaffold878:2705884..2716010
Genes list of scaffold habu1_scaffold878

Annotation by Blast2GO
Annotation GO
insulin gene enhancer protein isl-2 GO:0005634 GO:0006355 GO:0008270 GO:0021520 GO:0021524 GO:0031290 GO:0043565 GO:0045665

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s878_g03165.t1 1 1 LIM 1 41 4.9e-12 45.7 1.9e-15 9.2e-12 44.8
habu1_s878_g03165.t1 1 1 Homeobox 95 150 3.0e-15 55.5 1.0e-18 5.1e-15 54.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s878_g03165.t1 gi|558176612|ref|XP_006126302.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pelodiscus sinensis] 0.0
habu1_s878_g03165.t1 gi|530650466|ref|XP_005311676.1| PREDICTED: insulin gene enhancer protein ISL-2 [Chrysemys picta bellii] 0.0
habu1_s878_g03165.t1 gi|591388024|ref|XP_007068425.1| PREDICTED: insulin gene enhancer protein ISL-2 [Chelonia mydas] 0.0
habu1_s878_g03165.t1 gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus] 0.0
habu1_s878_g03165.t1 gi|589916609|ref|XP_006971624.1| PREDICTED: insulin gene enhancer protein ISL-2 [Peromyscus maniculatus bairdii] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.0
Pit, infrared sensing 0.2
Nose 1.9
Brain-1 0.0
Eye 1.6
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.1
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.6
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s878_g03165.t1
Definition-
>habu1_s878_g03165.t1
gggcggcttcagcagcagcgacctggtcatgcgcgcccgcggccacgtctaccacctggagtgcttccgatgcgccgtct
gcagccgccagctcctgcccggggacgagttctcgctgcgcgaccgcgagctgctctgccgcgccgaccaccgcctcctg
ctggagggcgcctcctcggccgagagccccccgcgcagccccggacacctgcagggcgccaggccgggcccgctcccgct
gccagacgcggtgcccgggcggcagccctcgctgcgttcccacgtgcacaagcaggcggagaagacgacccgggtgcgga
cggtgctgaacgagaagcagcttcacacgctgcgcacctgctacgcggccaacccgcggccggacgcgctgatgaaggag
cagctggtggagatgaccgggctgagcccacgcgtgatccgcgtctggttccagaacaagcgctgcaaagacaagaaaaa
gtccatcctcatgaaacagctgcagcagcagcagcacagcgacaaggcaagtttgcagggcttaactgggacgcccttgg
ttgctggcagccccatccgccacgacagcgccgtgcaaggcagcgcggtagaggtgcagacgtaccagcccccctggaaa
gctctcagcaattttgctctgcagagcgacttggatcagcctgccttccagcaactgctctccatttctgaatccggctc
cttaggcaactcatcgggcagcgacgtcacctctttatcgtcccagctccccgacacccccaacagcatggttcctagtc
cagtggaaacgtgagagcgtcttttgaacgctgaccctcaaggacattcagcatgttttctttgcttcttgcatgagaac
tgagcgctacggcaacacaacctgttaaattattc

Protein
Protein IDhabu1_s878_g03165.t1
Definition-
>habu1_s878_g03165.t1
MRARGHVYHLECFRCAVCSRQLLPGDEFSLRDRELLCRADHRLLLEGASSAESPPRSPGHLQGARPGPLPLPDAVPGRQP
SLRSHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQ
QQHSDKASLQGLTGTPLVAGSPIRHDSAVQGSAVEVQTYQPPWKALSNFALQSDLDQPAFQQLLSISESGSLGNSSGSDV
TSLSSQLPDTPNSMVPSPVET

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