Gene
| Gene Model ID | habu1_s878_g03166 |
|---|---|
| Locus | habu1_scaffold878 : 2735101 ... 2759089 : + |
| To GenomeBrowser | habu1_scaffold878:2735101..2759089 |
| Genes list of scaffold | habu1_scaffold878 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s878_g03166.t1 | 2 | 1 | ETF | 27 | 82 | 7.6e-35 | 120.0 | 3.5e-10 | 2.6e-06 | 27.2 |
| habu1_s878_g03166.t1 | 2 | 2 | ETF | 98 | 206 | 7.6e-35 | 120.0 | 8.1e-30 | 6.0e-26 | 91.1 |
| habu1_s878_g03166.t1 | 1 | 1 | ETF_alpha | 241 | 325 | 3.3e-39 | 132.3 | 8.80015e-43 | 6.6e-39 | 131.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s878_g03166.t1 | gi|602652058|ref|XP_007432408.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial, partial [Python bivittatus] | 0.0 |
| habu1_s878_g03166.t1 | gi|637379911|ref|XP_003230693.2| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s878_g03166.t1 | gi|530650464|ref|XP_005311675.1| | PREDICTED: LOW QUALITY PROTEIN: electron transfer flavoprotein subunit alpha, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s878_g03166.t1 | gi|591388022|ref|XP_007068424.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial [Chelonia mydas] | 0.0 |
| habu1_s878_g03166.t1 | gi|564244562|ref|XP_006261412.1| | PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 27.8 |
| Venom grand-1 | 31.9 |
| Pit, infrared sensing | 26.8 |
| Nose | 30.4 |
| Brain-1 | 8.5 |
| Eye | 21.1 |
| fetal fibroblast | 53.0 |
| venom gland-2 | 37.4 |
| Brain-2 | 8.8 |
| Spleen | 17.4 |
| Lung | 21.6 |
| Liver | 35.1 |
| Kidney | 41.2 |
| Pancreas | 24.8 |
| Small intestine | 18.1 |
| Large intestine | 23.7 |
| Stomach | 33.1 |
| heart | 60.0 |
| ovary | 41.3 |
| cheek muscle | 40.4 |
Transcript
| Transcript ID | habu1_s878_g03166.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03166.t1 gagatgagacggggcggagacggacgcgggggcgggggcggcgcctgaggcggaggccgaggaagaggaggaagaaggct cgccgtcgagggtcgccgccatgaccgcgctccggggcttcctcagggcgcagcgcctggggcggagagcgattttgtta cttcaccggtttcagagtacgctagtaattgctgagcacgccaatgagaccctgacaccaattactttgaacaccattac tgcggcaaaacgacttgggggtgaagtgtcctgtttagtagcggggaccagttgtgaaaaggttaaaaaaaaaagtgggc tgacacagggagttgctgttgtttatagcttgctggtgaaaatgctaattagttttgatgtggcacaagagctgagcaaa atacctggagtttccaaggtgctttttgcccaacacgatgcatataaaggacttctggctgaggagctgacaccgctgat tttggaaactcagaaacagttcagttacacgcacatctgtgccggagcatctgcctttgggaagaatctccttcccagag tggcagctaagttggatgttgctcctatctcagacgtcactgaaatcaagtcagccgatacttttgtgaggactatttat gcaggcaacgccctgtgcactgtgaagtgcgaggagaagatcaaggtgctttccatccgggggacttcctttgaggctgc cccagtgagcggaggcagcgccactgtcgaaaaaatatcagcccctgcacctgtcggccagtcggaatggattgagcaga agttgaccaaaagtgaccggccagaacttactagtgcaaaggtggttgtatcaggcgggcgaggcttgaagagtggcgaa aacttcaagctgttgtacgacctggcggatcagttgcatgctgcagtcggtgcttctcgagcggcggttgatgccggctt tgtccccaacgacatgcaagttggacagacgggcaaaattgtagcaccggaattatatatcgctgtaggaatatctggag ccattcagcatctagctggaatgaaagacagtaagaccatagtcgctatcaacaaagaccctgaagcgcccatattccaa gttgcagattatggcatagtagctgacctgttcaaggttgttcccgagctgacgacagcattaaaaaaatgaaagctact ccatgtttgggaaggaatgagtatctcttcgacagagagaaactatttttaagcagtttaaattatgttttatcaaacca gaaatgtaaaaattgccccaaaagtgccaataacgatcttgcaatacaccaattttagcccttttcatttccatttggct tcattattttctgaactctttttctaattctctaataaacatacatctgctgtattttgta |
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Protein
| Protein ID | habu1_s878_g03166.t1 |
|---|---|
| Definition | - |
>habu1_s878_g03166.t1 MTALRGFLRAQRLGRRAILLLHRFQSTLVIAEHANETLTPITLNTITAAKRLGGEVSCLVAGTSCEKVKKKSGLTQGVAV VYSLLVKMLISFDVAQELSKIPGVSKVLFAQHDAYKGLLAEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLDV APISDVTEIKSADTFVRTIYAGNALCTVKCEEKIKVLSIRGTSFEAAPVSGGSATVEKISAPAPVGQSEWIEQKLTKSDR PELTSAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAG MKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPELTTALKK |
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