Gene
| Gene Model ID | habu1_s8795_g18888 |
|---|---|
| Locus | habu1_scaffold8795 : 176036 ... 178968 : + |
| To GenomeBrowser | habu1_scaffold8795:176036..178968 |
| Genes list of scaffold | habu1_scaffold8795 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase pim-1 | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0005667 GO:0005737 GO:0008134 GO:0008283 GO:0009069 GO:0030145 GO:0031659 GO:0043024 GO:0043066 GO:0043433 GO:0046777 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18888.t1 | 1 | 1 | Pkinase | 2 | 203 | 0.0 | 177.3 | 0.0 | 0.0 | 176.8 |
| habu1_s8795_g18888.t1 | 1 | 1 | Pkinase_Tyr | 13 | 199 | 2.2e-16 | 59.7 | 1.6e-19 | 3.0e-16 | 59.2 |
| habu1_s8795_g18888.t1 | 1 | 1 | Kdo | 30 | 103 | 9.9e-08 | 31.2 | 7.9e-11 | 1.5e-07 | 30.7 |
| habu1_s8795_g18888.t1 | 1 | 1 | Kinase-like | 53 | 185 | 1.2e-08 | 34.2 | 8.0e-12 | 1.5e-08 | 33.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8795_g18888.t1 | gi|602659902|ref|XP_007435636.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Python bivittatus] | 0.0 |
| habu1_s8795_g18888.t1 | gi|327283603|ref|XP_003226530.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Anolis carolinensis] | 0.0 |
| habu1_s8795_g18888.t1 | gi|558220951|ref|XP_006135798.1| | PREDICTED: serine/threonine-protein kinase pim-1, partial [Pelodiscus sinensis] | 0.0 |
| habu1_s8795_g18888.t1 | gi|591378084|ref|XP_007063601.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Chelonia mydas] | 0.0 |
| habu1_s8795_g18888.t1 | gi|557285089|ref|XP_006025355.1| | PREDICTED: serine/threonine-protein kinase pim-1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.3 |
| Venom grand-1 | 4.0 |
| Pit, infrared sensing | 18.8 |
| Nose | 13.2 |
| Brain-1 | 2.4 |
| Eye | 2.5 |
| fetal fibroblast | 20.3 |
| venom gland-2 | 0.6 |
| Brain-2 | 1.7 |
| Spleen | 2.3 |
| Lung | 11.2 |
| Liver | 1.8 |
| Kidney | 0.3 |
| Pancreas | 0.1 |
| Small intestine | 2.9 |
| Large intestine | 14.5 |
| Stomach | 0.4 |
| heart | 5.4 |
| ovary | 2.8 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s8795_g18888.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18888.t1 cctcctgtatttgaaggtggccatcaagcatgtgtcccgggaccgggtttctgaatggggagaactgcctggtggaacaa gggtacccatggagattttgctcctgaaaaaagttggctctggatttcaaggggtgatccggctgctggattggtttgaa agaccagacagtttcattttggttttggaaaggccagatcctgttcaagatttatttgacttcatcacagaacgaggtgc tcttcctgaggatttggcccgtagcttttttcgtcaggtgttggaagcagttcgacattgccacagttgtggtgttctgc accgggatatcaaagatgagaatatcttgattgacttgagcaatggagagctcaaacttatagactttggatctggagca ctgctcaaggacacagtgtacacagactttgatggcactcgagtttacagtcctccagaatggatcagatatcatagata tcatggcagatctgctgctgtctggtcacttggggtattactctatgatatggtgtgtggggatattccttttgagcatg atgaagagattataaaaggccaggtctattttcgtcaaaggatttcttcagagtgtcagcatctcattaagtggtgtttg gctctaaggccttctgacaggccatcatttgaagatcttctaaatcattcttggatgcaagatgttctcctgcctcagga aacagctgagatccacttgcacagtctaattcaagaatctagcaaatagtctgtctcatccttctgaggagcaaaacaaa attttgccgtatttgatctggtggagtgaagacttttatagaaatgtgactcatctttttccagacacaggctgcctgat gactttctaagtctgaagaaacccatctcttggaggagagtggacttgctgtttgggagcctgacttataaatcttctca ccactagatgaata |
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Protein
| Protein ID | habu1_s8795_g18888.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18888.t1 MEILLLKKVGSGFQGVIRLLDWFERPDSFILVLERPDPVQDLFDFITERGALPEDLARSFFRQVLEAVRHCHSCGVLHRD IKDENILIDLSNGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGVLLYDMVCGDIPFEHDEE IIKGQVYFRQRISSECQHLIKWCLALRPSDRPSFEDLLNHSWMQDVLLPQETAEIHLHSLIQESSK |
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