Gene
| Gene Model ID | habu1_s8795_g18890 |
|---|---|
| Locus | habu1_scaffold8795 : 201966 ... 245115 : + |
| To GenomeBrowser | habu1_scaffold8795:201966..245115 |
| Genes list of scaffold | habu1_scaffold8795 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18890.t2 | 1 | 1 | RabGAP-TBC | 227 | 470 | 0.0 | 170.7 | 0.0 | 0.0 | 170.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 1.8 |
| Nose | 2.7 |
| Brain-1 | 2.2 |
| Eye | 2.7 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 2.9 |
| Brain-2 | 2.5 |
| Spleen | 2.8 |
| Lung | 1.5 |
| Liver | 1.8 |
| Kidney | 2.1 |
| Pancreas | 3.4 |
| Small intestine | 4.4 |
| Large intestine | 3.2 |
| Stomach | 2.5 |
| heart | 2.4 |
| ovary | 0.8 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s8795_g18890.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18890.t1 gcgagggcctcggcctctgtccgaggtatggctgcggaaagcagcaagcagttctggaagcggagcgcgaagctaccggg cagtattcaacctgtttatggagctcagcatcctccactggacccacggctcactaaaaacttcatcaaggaacgctcca agatcaacacgctatctatgaaaaataagaaggccagcagttttcatgagtttgctcgggacactagtgatgcttgggat attggggatgatgaagatgaagatttctcatctttccaaacattgaactctaaagtggccaaggccacagcagcacaagt cctggaaaatcacagcaggctgcgtatgaaacccgagtggccccaggcagctctcagcgatgcaccaatcaattgtaaag tcatcaaatccaacagtgaggcccagctatccagaggacctgaggatgcctgtatgcgcaaccccctccacaaacagcaa tccctcccactccgacccatcattccacttgtcgctcgcatctctgaccaaaatgcttctggggctcctcccatgacggt gcgtgagaaaactcgaatggaaaaattccggcagcttctgtccagccaaaacacagatctagatgaattgaggaaatgca gctggcctggtgtccccagagaggttcgtcctgtgacttggcgacttttatcaggttatctccctgccaatatggaacga aggaagctgactttacaacgaaaacgagaagagtattttgggttcatacaacagtattatgattccagaaatgaggagca ccatcaagatacctatcggcagatccatatagacattccacggacaaatcctctcatccctctgttccagcaaccattag ttcaagagatctttgaacgaatcctgtttatctgggccatccgacaccctgccagcggctacgtgcaagggattaatgac ctggtcactccattctttgttgtgttcctctctgaatatgttgaagaagatgtggagaactttgatgtaacaaacttatc tcaagatgtgctgcaaagcatcgaagctgacagcttttggtgtatgagcaaactgctggatgggatccaggacaactaca catttgcacaaccagggatccaaaaaaaagtcaaagcactggaggaacttgtcagtcgtattgatgagcaggtacacagt cactttaggaagtatgaagtggagtacttgcagtttgcctttcgctggatgaacaatctcctgatgagggagcttcctct tcgctgcaccattcgcctttgggacacttatcagtctgagcctgagggattctctcatttccatttatacgtctgtgctg cattcttgattaagtggcggaaagagattttggatgaagaggacttccagggccttctaatgttactacagaatctaccc accatacactggggcaatgaagagattggactcctccttgctgaagcctacagactaaagtacatgtttgcagatgctcc caatcactatcgtcgataggcagtaggggtctgcctttgcttctcattgtgctggcacagtttcaatcactgtggcattc gatcacctaagccctcggacacactgaccaggagcccaatctttgctgtaaaaaagctcccatcagacttctgtcttcac ttttgtgtgtgcctgcctgccactccatgtgtggacatgccactccagaaaccattagtgtcctgctgtgatgatggcct gagcttggatggaagtgaaatgaataaacagaacttctgaatgccttccaagtttcagcctagataatagtctttgcagc ctcttgttaacctgctaagcacagacaaactcatgcacttcctgtttggcctgtttctttttttcttgtttccccgtttc ttcttcggcagttgtttaaactccccaatgaagatgccttacaaagagtcctgcccaagagaaggcagtgctgttgaaca caagacactctcaggccttagcttcactctgcatgtctgaagaagtgaagcatttcaggcattaacaaaagacatatata cttcatgtgcatgctgccacattcctcttgtgcagcatctctgtgtgggatgatgcacatacattgaaaaggctgtctag ttcatgcacaattcagaaaatacaagtgaataaaaacaactccacctgtaattgttggattgcctaacctggtatgtgca ctgaacgtaggtgaggggggggggagctgtgctttttttccccttcttttttagaaaaaaaaatcctttctgtgacaatg acactcctgtaaggcattatatgtaaattgtgttcttgtgtatatgggtaaaggttgtacaatataagtcgtctgtttgt agcagatatgattttatatttatagtctgcctctctggcgtgcaaacgctgcctaggttacaaataacgatgggcctcct gcttcctctgtccatcaggttttgaagctgtcaacacatctgcactagcacatttattcttccccagaatgcacatttca tttttattagagggaaaaaaaaatgactccaaagcagaatgacattgcatgacctccagtgccaaggaatttgagggtct gaagattttaaaaaacttgctgctgaaccatgaatttcatggattttttattttttttattttatttttttgttgcggga tgcctgcacttcccaaacccacaagcttgcccttgtggaaagcagatctcctccagctgtggcaaagcacattgctatgg ctctgtcttctgcaaggtttgtgtcctatcctgtgtcttctggatgtttatgctcagctacacccacccctttctccagg cagagacttcttctttcaaggctccaacctcttctggggagacagcagctttaataccaagcccacttcttctcctctcc actattttggcagtgtgagttccagtgaaaaaaaaggaatatatattttaattaactggtttatgcaggcagtagtgcaa tctcattagtgccaacctttggcctctcagatcacatttgtttccataggccaaattcttcagattgtgccgggctgact tctgcttgtctcatcagacttccaactgcatccatctcattttgttttctttcttggagttgaaataggaaaagcagatt cctgggattcttttttcagtgagggtgttgggggatatttgaggcagaagaaacacaagacccttgccatcattcagaca ccagtgtttctcaagttgctttcctaaccgggaattgttttttttttcaggtattgactggattttcctttgtaagtgtg tatgtgtgaatttgttgtttccattctgacaacaacctggtggtcattagtttaatatgactgattaaaaaaaaaaatcc agcttctgttg |
|
| Transcript ID | habu1_s8795_g18890.t2 |
| Definition | - |
>habu1_s8795_g18890.t2 gcgagggcctcggcctctgtccgaggtatggctgcggaaagcagcaagcagttctggaagcggagcgcgaagctaccggg cagtattcaacctgtttatggagctcagcatcctccactggacccacggctcactaaaaacttcatcaaggaacgctcca agatcaacacgctatctatgaaaaataagaaggccagcagttttcatgagtttgctcgggacactagtgatgcttgggat attggggatgatgaagatgaagatttctcatctttccaaacattgaactctaaagtggccaaggccacagcagcacaagt cctggaaaatcacagcaggctgcctatccagaggacctgcatgctgaaggaagaaggaatgaaagagcctgaaatctgga aacagatggaagggattgaacaggaggagacgatggaagaagagctgagagagcattggctttatataatgttgatggac aggccagaggatgcctgtatgcgcaaccccctccacaaacagcaatccctcccactccgacccatcattccacttgtcgc tcgcatctctgaccaaaatgcttctggggctcctcccatgacggtgcgtgagaaaactcgaatggaaaaattccggcagc ttctgtccagccaaaacacagatctagatgaattgaggaaatgcagctggcctggtgtccccagagaggttcgtcctgtg acttggcgacttttatcaggttatctccctgccaatatggaacgaaggaagctgactttacaacgaaaacgagaagagta ttttgggttcatacaacagtattatgattccagaaatgaggagcaccatcaagatacctatcggcagatccatatagaca ttccacggacaaatcctctcatccctctgttccagcaaccattagttcaagagatctttgaacgaatcctgtttatctgg gccatccgacaccctgccagcggctacgtgcaagggattaatgacctggtcactccattctttgttgtgttcctctctga atatgttgaagaagatgtggagaactttgatgtaacaaacttatctcaagatgtgctgcaaagcatcgaagctgacagct tttggtgtatgagcaaactgctggatgggatccaggacaactacacatttgcacaaccagggatccaaaaaaaagtcaaa gcactggaggaacttgtcagtcgtattgatgagcaggtacacagtcactttaggaagtatgaagtggagtacttgcagtt tgcctttcgctggatgaacaatctcctgatgagggagcttcctcttcgctgcaccattcgcctttgggacacttatcagt ctgagcctgagggattctctcatttccatttatacgtctgtgctgcattcttgattaagtggcggaaagagattttggat gaagaggacttccagggccttctaatgttactacagaatctacccaccatacactggggcaatgaagagattggactcct ccttgctgaagcctacagactaaagtacatgtttgcagatgctcccaatcactatcgtcgataggcagtaggggtctgcc tttgcttctcattgtgctggcacagtttcaatcactgtggcattcgatcacctaagccctcggacacactgaccaggagc ccaatctttgctgtaaaaaagctcccatcagacttctgtcttcacttttgtgtgtgcctgcctgccactccatgtgtgga catgccactccagaaaccattagtgtcctgctgtgatgatggcctgagcttggatggaagtgaaatgaataaacagaact tctgaatgccttccaagtttcagcctagataatagtctttgcagcctcttgttaacctgctaagcacagacaaactcatg cacttcctgtttggcctgtttctttttttcttgtttccccgtttcttcttcggcagttgtttaaactccccaatgaagat gccttacaaagagtcctgcccaagagaaggcagtgctgttgaacacaagacactctcaggccttagcttcactctgcatg tctgaagaagtgaagcatttcaggcattaacaaaagacatatatacttcatgtgcatgctgccacattcctcttgtgcag catctctgtgtgggatgatgcacatacattgaaaaggctgtctagttcatgcacaattcagaaaatacaagtgaataaaa acaactccacctgtaattgttggattgcctaacctggtatgtgcactgaacgtaggtgaggggggggggagctgtgcttt ttttccccttcttttttagaaaaaaaaatcctttctgtgacaatgacactcctgtaaggcattatatgtaaattgtgttc ttgtgtatatgggtaaaggttgtacaatataagtcgtctgtttgtagcagatatgattttatatttatagtctgcctctc tggcgtgcaaacgctgcctaggttacaaataacgatgggcctcctgcttcctctgtccatcaggttttgaagctgtcaac acatctgcactagcacatttattcttccccagaatgcacatttcatttttattagagggaaaaaaaaatgactccaaagc agaatgacattgcatgacctccagtgccaaggaatttgagggtctgaagattttaaaaaacttgctgctgaaccatgaat ttcatggattttttattttttttattttatttttttgttgcgggatgcctgcacttcccaaacccacaagcttgcccttg tggaaagcagatctcctccagctgtggcaaagcacattgctatggctctgtcttctgcaaggtttgtgtcctatcctgtg tcttctggatgtttatgctcagctacacccacccctttctccaggcagagacttcttctttcaaggctccaacctcttct ggggagacagcagctttaataccaagcccacttcttctcctctccactattttggcagtgtgagttccagtgaaaaaaaa ggaatatatattttaattaactggtttatgcaggcagtagtgcaatctcattagtgccaacctttggcctctcagatcac atttgtttccataggccaaattcttcagattgtgccgggctgacttctgcttgtctcatcagacttccaactgcatccat ctcattttgttttctttcttggagttgaaataggaaaagcagattcctgggattcttttttcagtgagggtgttggggga tatttgaggcagaagaaacacaagacccttgccatcattcagacaccagtgtttctcaagttgctttcctaaccgggaat tgttttttttttcaggtattgactggattttcctttgtaagtgtgtatgtgtgaatttgttgtttccattctgacaacaa cctggtggtcattagtttaatatgactgattaaaaaaaaaaatccagcttctgttg |
|
Protein
| Protein ID | habu1_s8795_g18890.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18890.t1 MAAESSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERSKINTLSMKNKKASSFHEFARDTSDAWDIGDDEDEDF SSFQTLNSKVAKATAAQVLENHSRLRMKPEWPQAALSDAPINCKVIKSNSEAQLSRGPEDACMRNPLHKQQSLPLRPIIP LVARISDQNASGAPPMTVREKTRMEKFRQLLSSQNTDLDELRKCSWPGVPREVRPVTWRLLSGYLPANMERRKLTLQRKR EEYFGFIQQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVF LSEYVEEDVENFDVTNLSQDVLQSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHSHFRKYEVEY LQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLMLLQNLPTIHWGNEEI GLLLAEAYRLKYMFADAPNHYRR |
|
| Protein ID | habu1_s8795_g18890.t2 |
| Definition | - |
>habu1_s8795_g18890.t2 MAAESSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERSKINTLSMKNKKASSFHEFARDTSDAWDIGDDEDEDF SSFQTLNSKVAKATAAQVLENHSRLPIQRTCMLKEEGMKEPEIWKQMEGIEQEETMEEELREHWLYIMLMDRPEDACMRN PLHKQQSLPLRPIIPLVARISDQNASGAPPMTVREKTRMEKFRQLLSSQNTDLDELRKCSWPGVPREVRPVTWRLLSGYL PANMERRKLTLQRKREEYFGFIQQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPLFQQPLVQEIFERILFIWAIRHPASGY VQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDVLQSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRI DEQVHSHFRKYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLM LLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR |
|