Gene
| Gene Model ID | habu1_s8795_g18891 |
|---|---|
| Locus | habu1_scaffold8795 : 290556 ... 318420 : + |
| To GenomeBrowser | habu1_scaffold8795:290556..318420 |
| Genes list of scaffold | habu1_scaffold8795 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18891.t2 | 1 | 1 | TAFA | 38 | 88 | 3.8e-11 | 42.9 | 3.9e-15 | 5.7e-11 | 42.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8795_g18891.t2 | gi|602639610|ref|XP_007426624.1| | PREDICTED: protein FAM19A5-like isoform X2 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 2.0 |
| Nose | 1.2 |
| Brain-1 | 4.9 |
| Eye | 1.0 |
| fetal fibroblast | 1.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 5.7 |
| Spleen | 0.9 |
| Lung | 1.0 |
| Liver | 0.1 |
| Kidney | 0.9 |
| Pancreas | 0.1 |
| Small intestine | 1.2 |
| Large intestine | 2.4 |
| Stomach | 1.6 |
| heart | 0.8 |
| ovary | 0.1 |
| cheek muscle | 9.9 |
Transcript
| Transcript ID | habu1_s8795_g18891.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18891.t1 agtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnggccgaggcgtagctggcaagcggcaaagacggagcaggccgaccaccagct ggcccagcccaagggagctttgctctgccagaaagggaatgcagctgtgctccagtcacagcagaatctgctctgtgcca gacagacaccccctgatagctggatttagaaaaagcctgaacttagtagtggggcgcatccttctttggcccctgctggt ggcccatctgggaaaacggctataagaatgctggccggttggagagagctgtctaccaggataagtgctatacttggctg tctcctcttcttctggctcttttactgccatctgcccaaggaaggaagggagctggaggtggggacatgtgagatcacag ccctggatagagatatgagccatcccaaaagaatgattgcccgacagacagcacggtgtgcctgtcgaagaggacaagtt gctggaacaacaaaagcaaaacctgcctgtgtagatgcccagatcattgttaataaacagtggtgtgggatggagccctg tgatgaaggggagcaatgcactttattaatcaatcgttctggctggagttgtactaggcaactgggacgaataaaaacag tcacggtttcttgacatcaatagaacactataagagcaccttctccacttcctgtgtgctgatgggcaaagttcagaggt cacctcatcatgaaaaatgggacaatccactttctcagtatgggtttatccccataaatcagggcccatctcatctgtat ttcctcttgtgccggcacattggatgcagaggctactgaaacaagcatctttgtgttgtatgtacgaaattaacttttct tccctctccccaaagcaaatatatctatttatagtttatgttgtg |
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| Transcript ID | habu1_s8795_g18891.t2 |
| Definition | - |
>habu1_s8795_g18891.t2 agtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnggccgaggcgtagctggcaagcggcaaagacggagcaggccgaccaccagct ggcccagcccaagggagctttgctctgccagaaagggaatgcagctgtgctccagtcacagcagaatctgctctgtgcca gacagacaccccctgatagctggatttagaaaaagcctgaacttagtagtggggcgcatccttctttggcccctgctggt ggcccatctgggaaaacggctataagaatgctggccggttggagagagctgtctaccaggataagtgctatacttggctg tctcctcttcttctggctcttttactgccatctgcccaaggaaggaagggagctggaggtggggacatgtgagatcacag ccctggatagagatatgagccatcccaaaagaatgattgcccgacagacagcacggtgtgcctgtcgaagaggacaagtt gctggaacaacaaaagcaaaacctgcctgtgtagatggtttcttgacatcaatagaacactataagagcaccttctccac ttcctgtgtgctgatgggcaaagttcagaggtcacctcatcatgaaaaatgggacaatccactttctcagtatgggttta tccccataaatcagggcccatctcatctgtatttcctcttgtgccggcacattggatgcagaggctactgaaacaagcat ctttgtgttgtatgtacgaaattaacttttcttccctctccccaaagcaaatatatctatttatagtttatgttgtg |
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Protein
| Protein ID | habu1_s8795_g18891.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18891.t1 MLAGWRELSTRISAILGCLLFFWLFYCHLPKEGRELEVGTCEITALDRDMSHPKRMIARQTARCACRRGQVAGTTKAKPA CVDAQIIVNKQWCGMEPCDEGEQCTLLINRSGWSCTRQLGRIKTVTVS |
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| Protein ID | habu1_s8795_g18891.t2 |
| Definition | - |
>habu1_s8795_g18891.t2 MLAGWRELSTRISAILGCLLFFWLFYCHLPKEGRELEVGTCEITALDRDMSHPKRMIARQTARCACRRGQVAGTTKAKPA CVDGFLTSIEHYKSTFSTSCVLMGKVQRSPHHEKWDNPLSQYGFIPINQGPSHLYFLLCRHIGCRGY |
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