Gene
| Gene Model ID | habu1_s8795_g18897 |
|---|---|
| Locus | habu1_scaffold8795 : 540432 ... 547802 : - |
| To GenomeBrowser | habu1_scaffold8795:540432..547802 |
| Genes list of scaffold | habu1_scaffold8795 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetraspan membrane protein of hair cell stereocilia | GO:0016324 GO:0032426 GO:0050910 GO:0060088 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18897.t1 | 1 | 1 | L_HGMIC_fpl | 25 | 202 | 0.0 | 225.3 | 0.0 | 0.0 | 225.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8795_g18897.t1 | gi|602639616|ref|XP_007426627.1| | PREDICTED: tetraspan membrane protein of hair cell stereocilia homolog [Python bivittatus] | 0.0 |
| habu1_s8795_g18897.t1 | gi|327283611|ref|XP_003226534.1| | PREDICTED: tetraspan membrane protein of hair cell stereocilia [Anolis carolinensis] | 0.0 |
| habu1_s8795_g18897.t1 | gi|530650541|ref|XP_005311707.1| | PREDICTED: tetraspan membrane protein of hair cell stereocilia [Chrysemys picta bellii] | 0.0 |
| habu1_s8795_g18897.t1 | gi|690428415|ref|XP_009333025.1| | PREDICTED: tetraspan membrane protein of hair cell stereocilia [Pygoscelis adeliae] | 0.0 |
| habu1_s8795_g18897.t1 | gi|675408132|ref|XP_008932528.1| | PREDICTED: tetraspan membrane protein of hair cell stereocilia [Manacus vitellinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 1.3 |
| Eye | 24.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.8 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.5 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s8795_g18897.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18897.t1 ggcttcctggctttctctgccaatcgctgtccgtggtgctgaaacagagctcacaaataagctgcttcctctccgctgct tggaagcaagagggatattccctctacagggagggaatgccaacttcttggaaagcaccagatatgtaggacgttgggag aggaagaacaggagcagcagcagcagcaactaaggctaagcaagcactcttcaggctccagcacctcccaccgagctgtt cagcattgaaacaaatagcctttcgtgcaaatggtcatctgagcatctgaggctggggcaaagagtcacgggaaaggcaa aagctgcttcacagaatcttgatctatcagggaggtggaaagccaaccttgcagcccctcttccttggattcagcttccc tatgtgctgctcctcgttaaagttcctggagtgagaaggcaattgttttctgtttgatcctgaacttcaaggcatgtctt acaagacatagccatctctctgtgaagccatggcaaagatgcttccagcacaggaagcggcaaagatctatcataccaac tacgtgaggaatgctcgagccatgggagtgctgtgggcactgttcaccctctgctttgctgtgatcatggtggtaacttt catccagccctattggattggagacagcattgatactccacaagctggttattttggcctctactcctattgcattggaa atgccctgactggtgaactcatctgcaagggcagccctctggactttggcaccatcccttcaagtgctttcaaaacagcc atgttttttgtgggcatttctaccttccttataattggctgcatcctctgcttcagcctcttcttcttctgcaatgcagc cactgtctacaaagtgtgtgcttggatgcaactggcagcatgtgcgggcttgtccattggctgcctactctaccctgatg gctgggactcccctgaggtgaaacgcatgtgtggagagaagactgacaaatacaccctgggagtctgcactgtgcgctgg gcatacatcctttgcatcatcggcattcttgatgccctcatcctttcttttttagcatttgtgcttggcaacaggcaaga caatcttctaccctctgattttcaagtggaaaacaaagaggaagcaaataaatgaagatgaatactgaaggaatcgcaag tgtacttacttctgcccttgaatactgagcaccccaactcgatcttgaactcagataagcgacttggcacacatgaatgc taatgtggattctgccagctatctagacacatcagtctgtattatagaagaatgattctgcaaaatagcgcgcttttcaa gaaaaggcgactatgacaaagtaaattttgttcagcatgacatcaattggttttgatctccacatcctgtttgcaatgtt ttgtatattgttctataactgtgaggcccaatagatctggataattaataatagacctcaaaacattttgctgaattaaa tattgcatccattcagccagtt |
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Protein
| Protein ID | habu1_s8795_g18897.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18897.t1 MAKMLPAQEAAKIYHTNYVRNARAMGVLWALFTLCFAVIMVVTFIQPYWIGDSIDTPQAGYFGLYSYCIGNALTGELICK GSPLDFGTIPSSAFKTAMFFVGISTFLIIGCILCFSLFFFCNAATVYKVCAWMQLAACAGLSIGCLLYPDGWDSPEVKRM CGEKTDKYTLGVCTVRWAYILCIIGILDALILSFLAFVLGNRQDNLLPSDFQVENKEEANK |
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