Gene
| Gene Model ID | habu1_s8795_g18898 |
|---|---|
| Locus | habu1_scaffold8795 : 552803 ... 562865 : + |
| To GenomeBrowser | habu1_scaffold8795:552803..562865 |
| Genes list of scaffold | habu1_scaffold8795 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: colipase [Python bivittatus] | GO:0007586 GO:0008047 GO:0016042 GO:0043085 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18898.t1 | 1 | 1 | Colipase | 21 | 60 | 1.3e-21 | 75.8 | 3.4e-25 | 1.3e-21 | 75.8 |
| habu1_s8795_g18898.t1 | 1 | 1 | Colipase_C | 62 | 106 | 1.8e-23 | 81.9 | 9.9e-27 | 3.7e-23 | 81.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8795_g18898.t1 | gi|602639614|ref|XP_007426626.1| | PREDICTED: colipase [Python bivittatus] | 0.0 |
| habu1_s8795_g18898.t1 | gi|327283613|ref|XP_003226535.1| | PREDICTED: colipase [Anolis carolinensis] | 0.0 |
| habu1_s8795_g18898.t1 | gi|395533989|ref|XP_003769031.1| | PREDICTED: colipase isoform X1 [Sarcophilus harrisii] | 0.0 |
| habu1_s8795_g18898.t1 | gi|126309773|ref|XP_001369914.1| | PREDICTED: colipase [Monodelphis domestica] | 0.0 |
| habu1_s8795_g18898.t1 | gi|395832247|ref|XP_003789185.1| | PREDICTED: colipase isoform X1 [Otolemur garnettii] | 6.02558e-44 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.2 |
| Eye | 0.2 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 4.7 |
| Brain-2 | 0.6 |
| Spleen | 663.8 |
| Lung | 0.1 |
| Liver | 0.2 |
| Kidney | 3.7 |
| Pancreas | 2360.7 |
| Small intestine | 0.2 |
| Large intestine | 0.7 |
| Stomach | 1.0 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 1.8 |
Transcript
| Transcript ID | habu1_s8795_g18898.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18898.t1 gactctcatcccaagagcctttgattaactcattggctgcccagaatcaatggacagactttggattttgttactgctga caattgccttggcagagtcttctgttcatcctagaggactggttcttaactttaacaatggggagctatgtcttcacagc atacagtgcaaaagccgctgctgtcaccgaaaaaccggattaagttttgctcgctgtgcagacaaggcagctgaaaatca agaatgttccctaaagagtctatatgaagtttactacaagtgcccttgtgagaggggcttaatctgtgatactgatcgga ccattgtgggaagtgttgtcaactctgactttggcatttgcaaggacccatcaaataaaatcagcagtgaaaaaaaagaa agaaagaagacaatggggagctatgtcttcacagcgtacagtgcaaaagcggctgctgtcaccgaaaaaacgaattaagt tttgctcgctgtgcagacaaggcagctgaaaacgaagaatgttccctaaaggtgagtgtccattttttaaaaaaaaatta gatgcccatcgtgagaggatcggagaaatatattctgttcagcatgacagcaattatgttttcagctagcagcacagagg acaactttaaagtaacagtgatatgccattcttgcgtaaaacaaacactgtgaaataaaaatcatatattaagccattgg t |
|
Protein
| Protein ID | habu1_s8795_g18898.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18898.t1 MDRLWILLLLTIALAESSVHPRGLVLNFNNGELCLHSIQCKSRCCHRKTGLSFARCADKAAENQECSLKSLYEVYYKCPC ERGLICDTDRTIVGSVVNSDFGICKDPSNKISSEKKERKKTMGSYVFTAYSAKAAAVTEKTN |
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