Gene
| Gene Model ID | habu1_s8795_g18901 |
|---|---|
| Locus | habu1_scaffold8795 : 688823 ... 843891 : + |
| To GenomeBrowser | habu1_scaffold8795:688823..843891 |
| Genes list of scaffold | habu1_scaffold8795 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional enhancer factor tef- partial | GO:0003700 GO:0005634 GO:0005667 GO:0035329 GO:0045449 GO:0045944 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8795_g18901.t1 | 2 | 1 | Tub | 201 | 236 | 0.0 | 247.5 | 2.2e-11 | 1.7e-07 | 30.5 |
| habu1_s8795_g18901.t1 | 2 | 2 | Tub | 237 | 364 | 0.0 | 247.5 | 0.0 | 0.0 | 215.4 |
| habu1_s8795_g18901.t1 | 1 | 1 | TEA | 384 | 782 | 0.0 | 529.3 | 0.0 | 0.0 | 529.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8795_g18901.t1 | gi|591377986|ref|XP_007063552.1| | PREDICTED: transcriptional enhancer factor TEF-5 isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s8795_g18901.t1 | gi|602639634|ref|XP_007426636.1| | PREDICTED: transcriptional enhancer factor TEF-5 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s8795_g18901.t1 | gi|637296131|ref|XP_008107996.1| | PREDICTED: transcriptional enhancer factor TEF-5 isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s8795_g18901.t1 | gi|602639636|ref|XP_007426637.1| | PREDICTED: transcriptional enhancer factor TEF-5 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s8795_g18901.t1 | gi|637296125|ref|XP_008107994.1| | PREDICTED: transcriptional enhancer factor TEF-5 isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 2.2 |
| Nose | 1.4 |
| Brain-1 | 0.4 |
| Eye | 11.5 |
| fetal fibroblast | 4.1 |
| venom gland-2 | 1.4 |
| Brain-2 | 0.4 |
| Spleen | 1.2 |
| Lung | 2.5 |
| Liver | 2.2 |
| Kidney | 3.0 |
| Pancreas | 0.7 |
| Small intestine | 1.6 |
| Large intestine | 2.8 |
| Stomach | 2.2 |
| heart | 3.7 |
| ovary | 12.5 |
| cheek muscle | 11.1 |
Transcript
| Transcript ID | habu1_s8795_g18901.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18901.t1 cctcgacttacgaccggtttagtcctcgacttacgaccggtttagtccttgacttatgaccggttggggtcgtggcatta aaaagtcagacatcctccgtgaagtatgggcatccgaaggtgcaaatgaggaatctgcacctcagaaacttaataaacag aagcctttgcctttttattttctatctattgacctctacttattcaaacttttagaggattctgacgatgaagatgaaga ggaggaggaggaagagtggcaggaagaggaggagtctgaaagggaagaggcaccaaaaatgcccaaaagaaagcttctca agggtacttcattggataaaactaaggggaggaggaccaaaagtaaagagccaaaaaatagcgacacagaagatgattcc agatccaatgccaagtcaaccaaatcagagaaaaagaagagtgcagcgtcaatgtttcagactggaggagaaggcctcaa ggagaagaaaactaaaaagaaggttccccccaaagccatgaaaaatgaaagcgaggaagaagtagtccacaagaatgtca accggaaagggaaaaccaagaaatccaaaaagaaagaagaaagaccaccatctccagtcatcgaagaagacaatctggag gaatttgtgctgcagccagctcctcatggaatgaccatcaagtgtcgtctcactcgagacaaaagaggaatggatcgtgg tctctaccctacctattatcttcatcttgataatgacaaaaaggagacaaatgtattaggtttcaaaggacctcgaaaaa tgacagtggtcattcctggaatgaattctgataatgaaagagtgccaatccgtccccgaaatgataatgatgggttactc atgaggtggcagaataagataatggatagcttaattgagttgcataacaaagccccagtatggaatgatgaaactcagtc ttatgtgctgaacttccatggaagagttacacatgcctcagttaagaacttccagattgtgcacagtgatgaccctgaat acattgtcttgcaatttggccgagtggcggatgatgtttttaccatggactacaattacccactttgtgctgtgcaggct tttgccattgccctctcaagctttgatgggaaactagcctggtcagagcccagagcagccatcacaatagcgtccaacag ctggaacaccagcggcagccctggggaggggcgagaagatggacaagagggaatggacaaaagtctggacaatgatgccg aaggagtttggagtccagacattgaacaaagcttccaggaggcactggcaatatatccgccctgtggtcggcggaagatt atcctctcagatgagggcaaaatgtatggacgcaatgaactgatagcaagatacatcaagctacggacagggaagacaag gactagaaaacaggtgtccagccatatacaggttctagctcggaagaaggtgcgagagtaccaggttggcataaaggcta tgaacttggatcaagtctcaaaggacaaggctttgcagagtatggcttccatgtcttcagcacagattgtatctgccagt gtcctgcagaacaaactgagtcctcctcctccactccctcaggctgtcttctctgctgctcccaggttttggagtgggcc tatcccaggacagtctggatcttctcaggacattaaaccttttgcacaaccagcctaccccattcagccacccatgcctc catcactagccagctatgagcccttggctcctcttccaccttctgcctcagctgtgccagtctggcaggaccgaacgatt gcctctgccaagttgcggctccttgagtattcagcattcatggaagtacagcgtgaccctgaaacgacgaacccctcata cagtgacccactgctggaagcagtggacatacgccagatttatgacaagtttcctgagaaaaaaggtggcctgaaagagc tctatgagagaggaccccagaattcctttttccttgtcaagttttgggcggatctgaacagcactatacaggatggtcct ggtgctttttatggtgtaagcagtcaatatagcagtgctgaaaacatgaccatcacagtctccactaaagtgtgctcctt tggaaaacaagttgtcgaaaaggtggagactgaatttgctcggatggagaatggaagatgtgtgtatcgaatccatcggt ctcctatgtgcgagtatatgatcaacttcatccataaactgaaacatcttccagaaaaatacatgatgaatagtgtcctg gagaatttcaccatcctacaggttgttacaaacagagatacccaggaaacattactttgcatagcgtttgttttcgagat tctcaaaccaaatgcaatttacattattaaagtttctgaatcttgttttattaatatggcaattactgaatacatgttct ttactttaaatattaacagacaagaagaggaagcagagcatggaagagcacgcataatactgaacctttttatgaatttt tcacttatatttcataagagtagctacactgatctgttacagcaaaactaacaaagaatattttaacattttaagttttc ataataaatgtgttaattatggcatcactt |
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Protein
| Protein ID | habu1_s8795_g18901.t1 |
|---|---|
| Definition | - |
>habu1_s8795_g18901.t1 MTGWGRGIKKSDILREVWASEGANEESAPQKLNKQKPLPFYFLSIDLYLFKLLEDSDDEDEEEEEEEWQEEEESEREEAP KMPKRKLLKGTSLDKTKGRRTKSKEPKNSDTEDDSRSNAKSTKSEKKKSAASMFQTGGEGLKEKKTKKKVPPKAMKNESE EEVVHKNVNRKGKTKKSKKKEERPPSPVIEEDNLEEFVLQPAPHGMTIKCRLTRDKRGMDRGLYPTYYLHLDNDKKETNV LGFKGPRKMTVVIPGMNSDNERVPIRPRNDNDGLLMRWQNKIMDSLIELHNKAPVWNDETQSYVLNFHGRVTHASVKNFQ IVHSDDPEYIVLQFGRVADDVFTMDYNYPLCAVQAFAIALSSFDGKLAWSEPRAAITIASNSWNTSGSPGEGREDGQEGM DKSLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVR EYQVGIKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKLSPPPPLPQAVFSAAPRFWSGPIPGQSGSSQDIKPFAQPA YPIQPPMPPSLASYEPLAPLPPSASAVPVWQDRTIASAKLRLLEYSAFMEVQRDPETTNPSYSDPLLEAVDIRQIYDKFP EKKGGLKELYERGPQNSFFLVKFWADLNSTIQDGPGAFYGVSSQYSSAENMTITVSTKVCSFGKQVVEKVETEFARMENG RCVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAFVFEILKPNAIYIIKVSESCFIN MAITEYMFFTLNINRQEEEAEHGRARIILNLFMNFSLIFHKSSYTDLLQQN |
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