Gene
| Gene Model ID | habu1_s8853_g18942 |
|---|---|
| Locus | habu1_scaffold8853 : 1 ... 30423 : + |
| To GenomeBrowser | habu1_scaffold8853:1..30423 |
| Genes list of scaffold | habu1_scaffold8853 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein g subunit partial | GO:0001501 GO:0001508 GO:0001664 GO:0003924 GO:0004871 GO:0005096 GO:0005525 GO:0005765 GO:0006469 GO:0007189 GO:0007215 GO:0007507 GO:0009791 GO:0016322 GO:0021884 GO:0031683 GO:0035412 GO:0042711 GO:0042733 GO:0043547 GO:0045634 GO:0050821 GO:0060158 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8853_g18942.t2 | 1 | 1 | G-alpha | 13 | 142 | 0.0 | 194.0 | 0.0 | 0.0 | 193.8 |
| habu1_s8853_g18942.t2 | 1 | 1 | Arf | 71 | 129 | 2.7e-07 | 29.9 | 5.2e-11 | 3.8e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8853_g18942.t2 | gi|701430795|ref|XP_010003872.1| | PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like [Chaetura pelagica] | 0.0 |
| habu1_s8853_g18942.t2 | gi|530612381|ref|XP_005297780.1| | PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 3.8 |
| Nose | 3.5 |
| Brain-1 | 42.0 |
| Eye | 4.5 |
| fetal fibroblast | 36.5 |
| venom gland-2 | 4.3 |
| Brain-2 | 46.0 |
| Spleen | 4.6 |
| Lung | 5.6 |
| Liver | 2.1 |
| Kidney | 8.2 |
| Pancreas | 4.2 |
| Small intestine | 19.7 |
| Large intestine | 8.1 |
| Stomach | 10.3 |
| heart | 12.1 |
| ovary | 53.3 |
| cheek muscle | 9.9 |
Transcript
| Transcript ID | habu1_s8853_g18942.t1 |
|---|---|
| Definition | - |
>habu1_s8853_g18942.t1 gtcaatgcacaagtagttcgagaagttgatatagagaaagtgtcctcatttgagaacccctatgtagatgcaataaagat cttatggaacgatcctggtattcaagaatgctatgacagacgacgggaatatcagttgtcagattctactaaatattatc ttaatgatttggaccgcatagcagcctctggatatctacccactcaacaagatgttcttagagttcgggttccaactaca ggaatcattgaatacccatttgacttacaaagtgttattttcagaatggtggatgtggggggacagcgatcggaacgaag aaaatggatacactgttttgaaaatgtcacctccattatgtttctagtagctcttagcgaatatgatcaagtacttgtgg agtcagacaatgagaatcgaatggaggaaagcaaggcactatttaggacaattatcacatatccctggttccagaattct tcagtcattctattcttaaataagaaagaccttttagaggagaaaataatgtattcacatctagttgactatttcccgga gtatgatggacctcagcgagatgcacaggcagcaagagaatttatcttgaagatgtttgttgacctgaatcctgagagtg aaaaaattatctactcccatttcacgtgtgccacagacacagagaatatccgctttgtctttgctgccgtcaaggacact atcttacaattaaacctgaaggagtacaacttggtctaactgtgcctcttagatctctacccacccacttcgggcaattg aagatattcaagagggactgtattatctgtgaaaacgatctgcgtaatactaatttattgctggcctggactctgttaat atttgcagagtttgtagtaaatattacaattttatttaaactt |
|
| Transcript ID | habu1_s8853_g18942.t2 |
| Definition | - |
>habu1_s8853_g18942.t2 gtcaatgcacaagtagttcgagaagttgatatagagaaagtgtcctcatttgagaacccctatgtagatgcaataaagat cttatggaacgatcctggtattcaagaatgctatgacagacgacgggaatatcagttgtcagattctactaaatattatc ttaatgatttggaccgcatagcagcctctggatatctacccactcaacaagatgttcttagagttcgggttccaactaca ggaatcattgaatacccatttgacttacaaagtgttattttcagaatggtggatgtggggggacagcgatcggaacgaag aaaatggatacactgttttgaaaatgtcacctccattatgtttctagtagctcttagcgaatatgatcaagtacttgtgg agtcagacaatgagaataagagtcaacaacgacgtgatgtcaaataatcaagcaatcaaacattccacaataaagacaaa gaatgagtatccaatc |
|
Protein
| Protein ID | habu1_s8853_g18942.t1 |
|---|---|
| Definition | - |
>habu1_s8853_g18942.t1 VNAQVVREVDIEKVSSFENPYVDAIKILWNDPGIQECYDRRREYQLSDSTKYYLNDLDRIAASGYLPTQQDVLRVRVPTT GIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNS SVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPESEKIIYSHFTCATDTENIRFVFAAVKDT ILQLNLKEYNLV |
|
| Protein ID | habu1_s8853_g18942.t2 |
| Definition | - |
>habu1_s8853_g18942.t2 VNAQVVREVDIEKVSSFENPYVDAIKILWNDPGIQECYDRRREYQLSDSTKYYLNDLDRIAASGYLPTQQDVLRVRVPTT GIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENKSQQRRDVK |
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