Gene
| Gene Model ID | habu1_s8853_g18944 |
|---|---|
| Locus | habu1_scaffold8853 : 81909 ... 170835 : - |
| To GenomeBrowser | habu1_scaffold8853:81909..170835 |
| Genes list of scaffold | habu1_scaffold8853 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein partial | GO:0007399 GO:0007626 GO:0031045 GO:0035176 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s8853_g18944.t1 | 1 | 1 | DUF1162 | 1621 | 1867 | 0.0 | 209.3 | 0.0 | 0.0 | 207.0 |
| habu1_s8853_g18944.t1 | 1 | 1 | ATG_C | 2360 | 2441 | 1.0e-07 | 32.0 | 8.6e-11 | 6.4e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s8853_g18944.t1 | gi|637261574|ref|XP_008101482.1| | PREDICTED: vacuolar protein sorting-associated protein 13A [Anolis carolinensis] | 0.0 |
| habu1_s8853_g18944.t1 | gi|530612389|ref|XP_005297784.1| | PREDICTED: vacuolar protein sorting-associated protein 13A isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s8853_g18944.t1 | gi|530612395|ref|XP_005297787.1| | PREDICTED: vacuolar protein sorting-associated protein 13A isoform X6 [Chrysemys picta bellii] | 0.0 |
| habu1_s8853_g18944.t1 | gi|530612387|ref|XP_005297783.1| | PREDICTED: vacuolar protein sorting-associated protein 13A isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s8853_g18944.t1 | gi|530612393|ref|XP_005297786.1| | PREDICTED: vacuolar protein sorting-associated protein 13A isoform X5 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.9 |
| Venom grand-1 | 4.4 |
| Pit, infrared sensing | 5.1 |
| Nose | 3.2 |
| Brain-1 | 6.0 |
| Eye | 5.6 |
| fetal fibroblast | 7.6 |
| venom gland-2 | 3.0 |
| Brain-2 | 5.1 |
| Spleen | 5.9 |
| Lung | 6.0 |
| Liver | 5.3 |
| Kidney | 3.7 |
| Pancreas | 4.8 |
| Small intestine | 8.2 |
| Large intestine | 5.1 |
| Stomach | 6.4 |
| heart | 6.3 |
| ovary | 6.8 |
| cheek muscle | 17.3 |
Transcript
| Transcript ID | habu1_s8853_g18944.t1 |
|---|---|
| Definition | - |
>habu1_s8853_g18944.t1 cggactggcgcgagtctagatagacagtttcttccaggtgctgagggagctgtcgtgccaccacactctgaacaaccttc gcaagaaagcgaaggtggcgatatgttacacaaggcattcttgaagtaaacgtccaacctaagctacaaatgtggtcttg ggaacatattcgataccataggaatcaagtgaaaagttataaagagctctataaaataaaaataacttcaaagaaggtta tacaagacagtttgattatgttggaggaactagagaagacgttagatgtattcagcatcaccctagcaagacaacaggca gaatttgaggctattaaagctggattaaagattttcaaaccaggtgctaaacaagatgatgaagactctgatggctggtt tagttggatatggggttggtctggaggaaaaagctgtgaaacaaaacaagagccaaaaggtattgaacagtttatgactc cacaagaaaaagataaactctatgcagcaattggatatagtgaaactgctgtcgatccaacattgccaaaaacgtatgaa gctgtgaagctttatgtaaaattaataagcatgtcagtgctaatcagggaaaacaaggagaagcctgagctgataaagct tgcattaattgatctgcgtacgacagtaacacaacgccctggtgctgaagcaataagatttgaatcaagcgtaagtgcat ttgaagttcagggcatggctcagaaaaaaacagtaccctgtctgctgtcctctcacacagtccattcattgcacaatgca tcacttttcacgataatgtttgaaaccaatcccttagatgagaattgcaatcagagactaataatagagtcacaaccttt ggaaataatatatgatgccataactgtgaatagtttaattgatttcttccgacccccaagtgatgttcatttagagcaaa taacttcagcaaccttaacaaaattggaagaatttcgtgataggacagctacaggattagtgtacgttatagaaacccag aaggtcttagatttaaaaataaatcttatgtcttcctatgtcattgttccacaaaatggattttatgaagctacatcaaa taagctacttttggatctaggtcatttaaagatgagtagtaaaagtcggtctaccttgtcagatatcaaagttggcgaaa gtgctcttgaagatattatgtcaagagcatatgataagtttgacattcaactcagtagcatacagctactttatagcaga cattatgaaaactgggaggaggctcaatctgaagatgaattttatgatgctccaagtagtcctttggaagacctaccatt ttttgaagcacctttgggctcactgaatagagctagtagcttccgaaaaaacacagcaaaaccagaacctttgaaaaata tgactgatttccaattaagatttgaaatatctgaggtgttccttcaggtgtgtcgccttgcaaaagacattgaaaagcca attcttcggttggaaattttaaaattaggcactgaacttaagctcagaacatatgacatgactgctactgcttttcttag agaaatttgcttaatgtgtccagaatacattgataataaagacaagcctgtttatattatttcaaccctggataattcag tggaggatcttctatcaattgagtacattaaggcagatattaatgctccagaactgaagagtacttaccagaatgttcta caactgataaaggtgactttttcttctatagatattcatttacatacagaagcacttctgaatacaatgaattttgtaaa taatctccttccaactcaagaggctaatacagtagaagttgtccaagaaaaagaagaaaaaaaagaagttcttaggaaat ttagttcaaaaaaatcaaaacatgaggatgtttgtgatctccatcttttggtagatatgaattgtttacgtatttttata agagaacagaaacgctggatctcagaaattagcatagaaggtcttgatagccaagtgataatgaagaaagaaacaactga aatatctgctaaattaaagaatataattattgtggattgtgatgtgacagcactttataaaaaggcttttgtaaacaatt ttcagatggcaaaggaagcaattactgaagccactgttcaagctgctgaaaaagcagccacaggtgtaaaggaattagct aagcagagttcccgaatggcactggacattaacattaaagcacctgttgtcataattccacagtcagcagtatctaccga tgttttagttgctgattttggtatgattaccataaaaaatgagtttatgcttgtgaaaacaaagcttcgttacaatgtcc caccagttcttgacagtatttgtgtgaagctaagtgaactaaaattgtacagatcaactataatgaatggcttattacaa aatgaattacaactactgcagcccctaaatcttgaagttaaagttgaacgcaatttagctgctctttggtatcatgaaat tccagacattgagatatttgggcgtctcaagccaattaatcctcaagttaaggacgaacgagataatagtctgaaacttg cagaatttaaattactgttaatagccgctgctgtcaagatgttatcagatgggtcactgaatgcctcagttaagttaaca aattgcaccttagatgataaacgagaaactgtacagaaggcttcaccaagaatggtagaaatgaaacatggatctgaaaa gaaagtcatggtgaatataagctataaacaggggagagatggcaccactgttgtggacacaattgttgaggaaacctatc tctgtgctagtgtagagtttctgcttgctgttgcagaaatatttctaaatgctactgctgaaagcgctgctgcaaataaa aatttcaggcaaactttggctacaaaggaacaagctcctgtacagtcaacatctataatggaaataaatcttactgttaa aaatcctgacatagtgtttgtggctgatttaactcgaaaagatgcttctgcattggtagctacagcacagtgcgaaatct ccataaaaagtgcacctggaatgtataaaatgacagctgttgttgaagatataaatgtgaaagcttgtccattttttcca gctctgaggaaaggaaatattaccacggtattacaaccatgtgatcttttctttaatatgatgcagtcaggtgaagaacc gcagaaagctgagctgtcaataaaatgcctaactgttaaggtgtcacctattatcataaatacagttataactatcacat ccgcacttttcccaaccaaagagactgcagagaaagatcttagcccagtaccgccagatctttgggataagaagaatatt aaaaatctaaaaatgtggtttcttgaagagtccattgaaaacaaagatcctgcttccatagctgagttaattccaacagg agagtcattaacaatgaaaattgaaactgttgttataactcttgaagctggagttggtcacaaaacagtaccaatgcttt cagcaaaatcctcattttctggagaagtcaaaaattggagtagtctaatcaatctctcatcacgtcttgaactagaggta cactatttcaatgaaatgtttggtgtttgggaaccattacttgagcctctagaagtagaaaacagtgatgaattcagacc atgggttctagaattaaagatgaaaaagaaaaacaaaaaagcctttgttgaatcagtggcagaagaagaacactataaag tgccggagtataaaacagtaataactatttattctcaaaatcaactaaacattactttatccaaatgtgggttattaatg ttgagtaatctaggcacggcatttgcagaagcagctactgagacttcagaaacattcaaaaaagatagggccccttttgt attaataaattccttaggagtctccaccactgttttgcctagtgaatccttcagcgttcttaatattgaaccaaaagcaa attcatttcatcttgaagatgggcaaagtctaaatatggaatatatcagaactaaaagtgagcaagaccagttcacagca atgaccactctaagcagcaaggtattctacatctggctcactcctcagaatcattctactactgaccagattccattaac aaaagtgggacggagcttgtacagagttagacataatgattcaggtgttgtaagatctattgtctgtcaaattgatacag ttgatgggagcaagatagtaactgtacgttctccaattcagataaagaatcatttttcaattcctttgagtatatttgaa gatggaaaatgcttaggagtagcactaccagataatgaatttaacataccattaacttcctataggtcgttactgttttt tcgaccagtaattgatgaaagtgaaacttctggagagtatgaatcgagtgaaggtgttagctttgatgaaatggtgaaga attttgacaaattgcttcagaagaaatgccggtctttaaaatcacctaatcacccacttattatcaacattgttccaatg caagatactttgataacttcatcatgtacagatgatcagtgggatttaccatatgttgttcatttgtggtcttctgttat tctccgcaatctacttccatatcagattgcctattctttagagggatatagtaccacacgcagtgctctagaagctggat gttctgctcagattcataatgcattactggatcagaccaagttggaatttcatttacttaattatcttgataaagattgg actactgagtactgcatccagtcaaatcagcaagaaattagtttcatcacattttcatgcattagtgacctggataggac agatttggatatagctatccatgtgacatatgctacaggacaagtgattatagcaattcacagtccctattggatggtca acaagacgggtcgaatgttgcagtataaagccgatggtattcaccgcaaacatccacctgactacaagttgccacttctc ttttcttaccagcctaagcacttctaccatgataacaaggttcagctcatggtgacagagagtgaactttctgatcattt ttccctggatacagttgggagtcatggctttgtaaaatgtaagagccacaaaaaggaataccaagttggtgtcactatac ataatagcagctttaatatcactagaatagtgactttcacacccttttcaatgatcacaaatagaagtacacatgcttta gaagtagctgaagaaggcaatgaaaattgggtaccaatacttttccaacaatgtattccattttggcctgagaataatga cagcaagttgcaggttagagtaaaagattcttacattccacccaaagttatacaacttgataaacaagaaaattgcttac tacttcacttagacaacaagcttggtggcattattgtggatattactctagctgaacattcaacaacaattatattctct aattaccatgatggtgcagccccattccttataattaatcacaccaaagaagaagtaatcgaatatggacaaagttctct catttcaatcgaagaaactttagaaccaaataaagcagtactgtatacatgggcagatcctgtaggttctagaaaactga aatggaaatgtggaaagaacagtgaagaaataactcagaaagatgacctgatgacaccatttgaagtgggagccaagcac atttttatagtttcattttttgaaggtttgcagcgtataatcttattcactgaagatgaaaaggttttcaaaatgacata tgaaagtgaaaaagtggaattagcagaacaagaaataattgtatcattgcaagatgttggaatttctttagtaaataact atttaaagcaggaaatagcttacattggaatcacaagctctgatgtaatttgggagacaaaacccaagaaaaagtcaaga tggaagccactaagcgtgaagcaaactgacaagctggagaaagagtttattgaatactgtgataactcacctacagaaaa taaagtagtggaccttgatgataatattccgcaggtctgtttgactcctactggtaatgacatgaaaatattgcagccgt atgaatttcctgtgagaagaagctttttgccagctttaaaagtacaatatagtacatctgaacatcaggcttctttcaga gttcaaatctatagaatacagatacaaaatcagattcctggagccatatttccttttgtgttctatcccattaaacctcc caagtccatctcgttggattcagaacccaagccatttactgatgtcagtattgtgatgagaactgcaggacattctcaaa tatcgcgcattaagtattttaaagttttaattcaagagatggatctccgagtagatcttggtttcctttatgcagtgtct gatttctttatacttgttgacgaactgcccaaagaccaagaggttgaactctttaaaaaagatgtagaatctgcgcagga agaattaaagaatgcagtatcaactgacacatcacaaatcagtttatatgaatattttcatatctctccaatcaagctgc atttaagcttttcactcagtactggtggagaagacagcaacaaggacgagaaacacaaggacctgattccggttcagtcc ttaaacctcttgttaaagagcattggggccacactcacagatgtgcaggatgttgttcttaagttggctttctttgaact gaactatcacttctgtactacccaacaattgcaatgggcagttatcatgcattattcaaagcaggctattaaacaaatgt atgttcttgttcttggtctggatgttttgggcaatccatttggattcataagagatttgtctgaaggagtagaagcattt ttttatgagccctatcagggggctatccagggtccagaagaatttgtagaaggaatggcactaggattgaaagccttagt tggtggtgccgttggtggactagctggtgctgcttcaagaataactggtgctatggctaaaggagtagcagcaataacaa tggatgaagattatcagcagaaacgacgggaagctatgaataaacaacctgctggcctgaaggagggctttactcgtgga ggaaaaggcttagtatctggttttgtcagtggcataacaggaatagtaactaagccaataagaggagcccaaaaggaagg agcagcaggtttcttcaaaggagttggaaaaggattagtaggagcagtggcaaggcctactggaggaataatagatatgg ctagcagcacttttcaaggaattaaaagagctacaaatgcttctgaagatgtcataagcctgcgtcctccacgcttcttt ggggacgatggagtcattagaccgtacagattaagagatggggctggaagtcaaatgttacagaatattgaaaatggaag atttgcaaaactgcgatactttacacatgcaatggttaataatacagatttattaatggtcacaaaaagtggcatattgt ttgtgacaagaggtacgtttggacagttaacgtgtgaatggcagtacacctatgatgaatttaccaagaaaccattcatt attgatggacgaagattgcgcattgaagcaaaggaacgagtgaagtctgtatttcatgccaaagaatttggaaaaataat taattttaaaacaccagaagatgcaaagtggatcctctctaaactggaagaaaaagtaaaggagagtcaaccaaaactat gaccaattgaagaaaataagaacattgcagttgttttatacttcaaagcatgtgacactatttaaatacaaagagactga caccgtaattttgtgtatttaaatcaattgtttttgaatcttctacactactaagtgaaaaaggtcggttttaccaatat gcgcaagcagctctattgctgaaagctgctgttgaattgtggcttatttgattttgtatttataaataataattgtttaa atctaaactaaattggttttactttttgatctgccatgtaatcaacaagaccaaacatcttagcaaagtcttatgatgta gtggtaatcaggctcttccctttttgttcagtgtttattagaaggtaatgctgtactgacacatcacattaatattcact gaaattcagtttaattcaggaagaccgatttaaccagcaaagttctgatattaccttgctgaccttgctttgtttgagaa gctttttgtttactaatagatacagatatatatgtatataatgaagtgatttaattttttatacagataaggagtttatg gtactgtaacaccctttttaataatcacattttatataatacaaaaattagcaaaatgttctggtgtcgcaaaattaagc aaatatctatcaaacaaaatatgaaattttagtgattctttgaatggcaatggtcaaggtgaagtcagaaaactatcaac accgcatcatgttttaaagtactagttcatttaggcatgagttatattttggatttgaagtcaaaagcatgtttcagagt gaatggggcttatatcccatatgtttacactgactttttctggacttgctgaagaattccaggaaaatgcatgtattttt gtgcccactctgaagtactgtattagctttgaatcatagtttttcatttaggaatgagttacattttggatataaatcat gtttcagagtgaacatgtcttgtatcacatctgctggcatctccttaaaaaaagctgtcttcttttggacttgctgaagt actccaggaaaattcatgtgttgtgcccactctgaagtactttttcagctttggatccaaagtgtaacacatccctaatt ttatctaagaatgcccctgtgggtttgtatgtgatttggaggggtacggggaatccatggctcgttacagaatatttaat ggaaggtaatgttaaaacattcatcaaaacatatacacacataggatagggaaaatattgcacaaggttaattttaagac tatgcaaataaatactgcctatcacacctttatg |
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Protein
| Protein ID | habu1_s8853_g18944.t1 |
|---|---|
| Definition | - |
>habu1_s8853_g18944.t1 MWSWEHIRYHRNQVKSYKELYKIKITSKKVIQDSLIMLEELEKTLDVFSITLARQQAEFEAIKAGLKIFKPGAKQDDEDS DGWFSWIWGWSGGKSCETKQEPKGIEQFMTPQEKDKLYAAIGYSETAVDPTLPKTYEAVKLYVKLISMSVLIRENKEKPE LIKLALIDLRTTVTQRPGAEAIRFESSVSAFEVQGMAQKKTVPCLLSSHTVHSLHNASLFTIMFETNPLDENCNQRLIIE SQPLEIIYDAITVNSLIDFFRPPSDVHLEQITSATLTKLEEFRDRTATGLVYVIETQKVLDLKINLMSSYVIVPQNGFYE ATSNKLLLDLGHLKMSSKSRSTLSDIKVGESALEDIMSRAYDKFDIQLSSIQLLYSRHYENWEEAQSEDEFYDAPSSPLE DLPFFEAPLGSLNRASSFRKNTAKPEPLKNMTDFQLRFEISEVFLQVCRLAKDIEKPILRLEILKLGTELKLRTYDMTAT AFLREICLMCPEYIDNKDKPVYIISTLDNSVEDLLSIEYIKADINAPELKSTYQNVLQLIKVTFSSIDIHLHTEALLNTM NFVNNLLPTQEANTVEVVQEKEEKKEVLRKFSSKKSKHEDVCDLHLLVDMNCLRIFIREQKRWISEISIEGLDSQVIMKK ETTEISAKLKNIIIVDCDVTALYKKAFVNNFQMAKEAITEATVQAAEKAATGVKELAKQSSRMALDINIKAPVVIIPQSA VSTDVLVADFGMITIKNEFMLVKTKLRYNVPPVLDSICVKLSELKLYRSTIMNGLLQNELQLLQPLNLEVKVERNLAALW YHEIPDIEIFGRLKPINPQVKDERDNSLKLAEFKLLLIAAAVKMLSDGSLNASVKLTNCTLDDKRETVQKASPRMVEMKH GSEKKVMVNISYKQGRDGTTVVDTIVEETYLCASVEFLLAVAEIFLNATAESAAANKNFRQTLATKEQAPVQSTSIMEIN LTVKNPDIVFVADLTRKDASALVATAQCEISIKSAPGMYKMTAVVEDINVKACPFFPALRKGNITTVLQPCDLFFNMMQS GEEPQKAELSIKCLTVKVSPIIINTVITITSALFPTKETAEKDLSPVPPDLWDKKNIKNLKMWFLEESIENKDPASIAEL IPTGESLTMKIETVVITLEAGVGHKTVPMLSAKSSFSGEVKNWSSLINLSSRLELEVHYFNEMFGVWEPLLEPLEVENSD EFRPWVLELKMKKKNKKAFVESVAEEEHYKVPEYKTVITIYSQNQLNITLSKCGLLMLSNLGTAFAEAATETSETFKKDR APFVLINSLGVSTTVLPSESFSVLNIEPKANSFHLEDGQSLNMEYIRTKSEQDQFTAMTTLSSKVFYIWLTPQNHSTTDQ IPLTKVGRSLYRVRHNDSGVVRSIVCQIDTVDGSKIVTVRSPIQIKNHFSIPLSIFEDGKCLGVALPDNEFNIPLTSYRS LLFFRPVIDESETSGEYESSEGVSFDEMVKNFDKLLQKKCRSLKSPNHPLIINIVPMQDTLITSSCTDDQWDLPYVVHLW SSVILRNLLPYQIAYSLEGYSTTRSALEAGCSAQIHNALLDQTKLEFHLLNYLDKDWTTEYCIQSNQQEISFITFSCISD LDRTDLDIAIHVTYATGQVIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKLPLLFSYQPKHFYHDNKVQLMVTESEL SDHFSLDTVGSHGFVKCKSHKKEYQVGVTIHNSSFNITRIVTFTPFSMITNRSTHALEVAEEGNENWVPILFQQCIPFWP ENNDSKLQVRVKDSYIPPKVIQLDKQENCLLLHLDNKLGGIIVDITLAEHSTTIIFSNYHDGAAPFLIINHTKEEVIEYG QSSLISIEETLEPNKAVLYTWADPVGSRKLKWKCGKNSEEITQKDDLMTPFEVGAKHIFIVSFFEGLQRIILFTEDEKVF KMTYESEKVELAEQEIIVSLQDVGISLVNNYLKQEIAYIGITSSDVIWETKPKKKSRWKPLSVKQTDKLEKEFIEYCDNS PTENKVVDLDDNIPQVCLTPTGNDMKILQPYEFPVRRSFLPALKVQYSTSEHQASFRVQIYRIQIQNQIPGAIFPFVFYP IKPPKSISLDSEPKPFTDVSIVMRTAGHSQISRIKYFKVLIQEMDLRVDLGFLYAVSDFFILVDELPKDQEVELFKKDVE SAQEELKNAVSTDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNKDEKHKDLIPVQSLNLLLKSIGATLTDVQDVVLKLA FFELNYHFCTTQQLQWAVIMHYSKQAIKQMYVLVLGLDVLGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGL KALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNKQPAGLKEGFTRGGKGLVSGFVSGITGIVTKPIRGA QKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATNASEDVISLRPPRFFGDDGVIRPYRLRDGAGSQMLQNI ENGRFAKLRYFTHAMVNNTDLLMVTKSGILFVTRGTFGQLTCEWQYTYDEFTKKPFIIDGRRLRIEAKERVKSVFHAKEF GKIINFKTPEDAKWILSKLEEKVKESQPKL |
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