Gene
| Gene Model ID | habu1_s889_g03212 |
|---|---|
| Locus | habu1_scaffold889 : 32296 ... 55118 : + |
| To GenomeBrowser | habu1_scaffold889:32296..55118 |
| Genes list of scaffold | habu1_scaffold889 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03212.t1 | 2 | 1 | I-set | 7 | 84 | 4.0e-28 | 97.1 | 1.5e-13 | 3.1e-10 | 39.7 |
| habu1_s889_g03212.t1 | 2 | 1 | Ig_2 | 8 | 86 | 4.1e-19 | 68.4 | 4.7e-10 | 9.9e-07 | 28.8 |
| habu1_s889_g03212.t1 | 2 | 1 | ig | 8 | 81 | 1.8e-16 | 60.0 | 2.0e-12 | 4.1e-09 | 36.4 |
| habu1_s889_g03212.t1 | 2 | 1 | Ig_3 | 9 | 83 | 1.7e-14 | 54.0 | 7.2e-11 | 1.5e-07 | 31.7 |
| habu1_s889_g03212.t1 | 1 | 1 | V-set | 47 | 84 | 2.2e-11 | 43.6 | 7.5e-08 | 0.00016 | 21.5 |
| habu1_s889_g03212.t1 | 2 | 2 | Ig_3 | 110 | 181 | 1.7e-14 | 54.0 | 4.4e-06 | 0.0094 | 16.4 |
| habu1_s889_g03212.t1 | 2 | 2 | ig | 130 | 181 | 1.8e-16 | 60.0 | 5.7e-07 | 0.0012 | 18.9 |
| habu1_s889_g03212.t1 | 2 | 2 | I-set | 201 | 295 | 4.0e-28 | 97.1 | 1.4e-13 | 3.0e-10 | 39.7 |
| habu1_s889_g03212.t1 | 2 | 2 | Ig_2 | 212 | 293 | 4.1e-19 | 68.4 | 3.4e-08 | 7.2e-05 | 22.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03212.t1 | gi|704514578|ref|XP_010081442.1| | PREDICTED: neuroplastin, partial [Pterocles gutturalis] | 0.0 |
| habu1_s889_g03212.t1 | gi|663266546|ref|XP_008493542.1| | PREDICTED: neuroplastin [Calypte anna] | 0.0 |
| habu1_s889_g03212.t1 | gi|675418046|ref|XP_008922367.1| | PREDICTED: neuroplastin [Manacus vitellinus] | 0.0 |
| habu1_s889_g03212.t1 | gi|675622165|ref|XP_008939189.1| | PREDICTED: neuroplastin [Merops nubicus] | 0.0 |
| habu1_s889_g03212.t1 | gi|677645644|ref|XP_009076327.1| | PREDICTED: neuroplastin, partial [Acanthisitta chloris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 29.4 |
| Venom grand-1 | 19.7 |
| Pit, infrared sensing | 25.3 |
| Nose | 19.5 |
| Brain-1 | 41.3 |
| Eye | 19.5 |
| fetal fibroblast | 45.9 |
| venom gland-2 | 34.7 |
| Brain-2 | 45.5 |
| Spleen | 8.3 |
| Lung | 28.4 |
| Liver | 29.5 |
| Kidney | 23.1 |
| Pancreas | 12.8 |
| Small intestine | 19.6 |
| Large intestine | 21.2 |
| Stomach | 22.1 |
| heart | 39.0 |
| ovary | 4.6 |
| cheek muscle | 41.0 |
Transcript
| Transcript ID | habu1_s889_g03212.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03212.t1 gccaaattaggattgaaaatgtagttccaaagttttaactgtaattttttaagagcataataccccatcctttcttcact atttagaagaccagaaactttgcagcagctacattattaagaaataatcagcagcgtagagttaaatcagcaaatctttt atacttttcttgccaccacatttgaaactgggaagtgtgacaggaatggtgcctgatctcatactgaggtgctttgtcaa attggaggcaaaaaccgagttcttccttggctgatttataccatattgacttccaacactagttggcttacttcatgatt gaatgcatactggaatatgagggaaatggctgtctctaactctccaggtgactcagtgtataaacaagcagctgggtttg tcaagtcgcctatgtcagagactaagctcacaggggacgcctttgaactgtattgtgacgtggttgggaaccccacccca gagatccagtggtggtacgcagaagtcaaccgggctgaatctttcaaacagctgtgggatggcgctcgaaagcgccgtgt caccattaacacggcctacggggtgaatggcgtgagcgtgctgagaatcactcgtcttaccttggaagactctgggacat atgagtgcagggcgagcaacgatcccagaaggaatgacttgaggcaaaatcctgccataacgtggatacgagcccaggct actataagcgtccttcagaagccccggatcaattccagtaatgaggtgatcattacttcccctgcaattcctatcctact acagtgcaacctcaccactagccccagccccctccttcacagctactgggtaaaaaacggagaacagatgccaagtacca taaagaattcagacacgacagaatacaaaatctcaaagcctagagctgatgattcaggcgaatattggtgcgtatttgta tttgctggctcccctgaagcaaatgctacaatagaagtgaaagcggctcccgatattactgggcataagcgaagtgagaa caagaacgaagggcaggaggcattgatgtattgcaagtctgttggctacccgcatccagaatggacgtggtccaaaaaaa tcaatgggatgtctgtgggtattgacaactcttccggtcgcttcttcattaccaacaaagagaactacaccgaactcagt attgtgagcctccacatcaacgaagatcctggtgattacgaatgcaatgccacaaaccccgtgggcacggccactgaaat caccatcctgcgtgtacgcagccacttggctcctctctggcccttcctgggaattctggcagagatcatcattcttgtgg ttatcatagtggtttatgagaaaaggaagcggccagatgaggttccagatggctcatcctggtcgtgtcctacagactgc ttcctagcaaacgatgaaccagctggcccaatgaaaactaattccacaaacaaccataaagataaaaatctacgtcagag aaatacaaattaaaagcaacgcttatagctttatgtttgagagactgacagaaacgccacttgctagactgaactgcgaa ggttgatttgcaaactccattttt |
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Protein
| Protein ID | habu1_s889_g03212.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03212.t1 MSETKLTGDAFELYCDVVGNPTPEIQWWYAEVNRAESFKQLWDGARKRRVTINTAYGVNGVSVLRITRLTLEDSGTYECR ASNDPRRNDLRQNPAITWIRAQATISVLQKPRINSSNEVIITSPAIPILLQCNLTTSPSPLLHSYWVKNGEQMPSTIKNS DTTEYKISKPRADDSGEYWCVFVFAGSPEANATIEVKAAPDITGHKRSENKNEGQEALMYCKSVGYPHPEWTWSKKINGM SVGIDNSSGRFFITNKENYTELSIVSLHINEDPGDYECNATNPVGTATEITILRVRSHLAPLWPFLGILAEIIILVVIIV VYEKRKRPDEVPDGSSWSCPTDCFLANDEPAGPMKTNSTNNHKDKNLRQRNTN |
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