Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s889_g03217
Locus habu1_scaffold889 : 299716 ... 308542 : +
To GenomeBrowser habu1_scaffold889:299716..308542
Genes list of scaffold habu1_scaffold889

Annotation by Blast2GO
Annotation GO
adp-dependent glucokinase isoform x1 EC:2.7.1.0 GO:0005975 GO:0016020 GO:0016773

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s889_g03217.t2 1 1 ADP_PFK_GK 65 486 0.0 385.2 0.0 0.0 384.9

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.5
Venom grand-1 2.9
Pit, infrared sensing 3.7
Nose 2.7
Brain-1 3.6
Eye 2.5
fetal fibroblast 11.8
venom gland-2 24.0
Brain-2 4.2
Spleen 2.4
Lung 2.0
Liver 3.0
Kidney 6.1
Pancreas 2.6
Small intestine 3.4
Large intestine 2.4
Stomach 1.6
heart 2.2
ovary 1.5
cheek muscle 1.9

Transcript
Transcript IDhabu1_s889_g03217.t1
Definition-
>habu1_s889_g03217.t1
gacgtggcggacccaggacgagtgggatctgttcccagatggatggtgacccctgaagccccttggacggctacctgcct
ttgacagcctctccgtgtaatcctggtccgtcctcggccttggcgcaggacttcaccatgtggcgcaaggccctgggtgt
ggctctgctggccttgaccacgggttacgtcttctggctggaccccacgttgccggattccctgtgggagcatctctcgg
gctccttcctgtaccaacttcggggggatcgggggtccccggagggcagcatggccgaggcctgggacgccctcatcacc
cagccagctaagcagtggaacagagttgctgtgggggtcaacgcctgcgtagatgtgatcctgtctggggcgaagctgct
gcaggccctcggcttccgcggccagggcgggaaagaccactctgtcttgcgttccgctgctgatctggaagaagccttcc
tccattttatggggaagggggctgctgcagaacggttctttagtgatgcagacgccttccaccgcatcgcacaaatggcg
gccagctatcctgatgcccagctgtatgttggaggaaatgccgctctcattggccagaaaattgcatctcatcctgactt
aaaggttctactttgtggcccaatcgggcctaaacttcacgagttgcttgacgagaatgtaatggtccctccagaatccc
tgcaagaattagatgaatatcatcttattttggaataccaagcaggtgaagaatggggagagcggagagctcccaacgcc
aaccgattcatcttctcccatgacctgtccaacggggccatgaacatgctagaagtatttgtatccagcctggaggaatt
tcagccagacctggtggtgctttcaggattccatatgatggaaggacagaccagagagctacgccagaagaggatccgag
aggccgtaacttccatttctgacattcccatggacgtcccaatccatctggaattagccggtatgaccgacccagacctc
atgagagaaataattcaccagcagatcttccctctcgtgaactccatcggtttgaacgagcaagagctgctgtttctcag
ccaggcggcctcgggacctcactcctccttaacttcctggaatggcgttccagatgtggctgttgtcagtgacatcattt
tctggatcttgaaagaatacgggagaacttcagctcaggcttcggatctcacccggatccacttccatactttggcctac
cacctcctggttaccgtggacgggtattggggcaaccaggtggcagcggtggctgctggagccagggtggcggggaccca
agcttgtgccacccagaccattgacgccagcaaagtcttcctgaaggcaccactggagttcgccacgtccaagatggagg
gggcctccagagtctccttaaatccgaaggagcccatatcggtgtggcatcaggacgccatttctttccattacaccccc
gtgctggtgtgtaaaagccctctgcggactgtgggcctcggggacgccatatctgctgaaggactcctgtattcagaaat
ccatcctcattaaccaccgaataaagagatcactccatcgttcagac
Transcript IDhabu1_s889_g03217.t2
Definition-
>habu1_s889_g03217.t2
gtaatgctccccgggtctctcggcggagggcggcaggaatccggggtgcctgatggcagcagccgggcggtggggggagc
aggatcccctggtgggccccgaatagtattccagaacccatcgtcccctgcccgctgggtgccttcctcctggtctccaa
atgtgcttcccccccgtggttcccagctgatgaacatctttcatggccctccagtcgatgggactctaacgcccatcatc
cccagccatcatactccaagagtgggatctgttcccagatggatggtgacccctgaagccccttggacggctacctgcct
ttgacagcctctccgtgtaatcctggtccgtcctcggccttggcgcaggacttcaccatgtggcgcaaggccctgggtgt
ggctctgctggccttgaccacgggttacgtcttctggctggaccccacgttgccggattccctgtgggagcatctctcgg
gctccttcctgtaccaacttcggggggatcgggggtccccggagggcagcatggccgaggcctgggacgccctcatcacc
cagccagctaagcagtggaacagagttgctgtgggggtcaacgcctgcgtagatgtgatcctgtctggggcgaagctgct
gcaggccctcggcttccgcggccagggcgggaaagaccactctgtcttgcgttccgctgctgatctggaagaagccttcc
tccattttatggggaagggggctgctgcagaacggttctttagtgatgcagacgccttccaccgcatcgcacaaatggcg
gccagctatcctgatgcccagctgtatgttggaggaaatgccgctctcattggccagaaaattgcatctcatcctgactt
aaaggttctactttgtggcccaatcgggcctaaacttcacgagttgcttgacgagaatgtaatggtccctccagaatccc
tgcaagaattagatgaatatcatcttattttggaataccaagcaggtgaagaatggggagagcggagagctcccaacgcc
aaccgattcatcttctcccatgacctgtccaacggggccatgaacatgctagaagtatttgtatccagcctggaggaatt
tcagccagacctggtggtgctttcaggattccatatgatggaaggacagaccagagagctacgccagaagaggatccgag
aggccgtaacttccatttctgacattcccatggacgtcccaatccatctggaattagccggtatgaccgacccagacctc
atgagagaaataattcaccagcagatcttccctctcgtgaactccatcggtttgaacgagcaagagctgctgtttctcag
ccaggcggcctcgggacctcactcctccttaacttcctggaatggcgttccagatgtggctgttgtcagtgacatcattt
tctggatcttgaaagaatacgggagaacttcagctcaggcttcggatctcacccggatccacttccatactttggcctac
cacctcctggttaccgtggacgggtattggggcaaccaggtggcagcggtggctgctggagccagggtggcggggaccca
agcttgtgccacccagaccattgacgccagcaaagtcttcctgaaggcaccactggagttcgccacgtccaagatggagg
gggcctccagagtctccttaaatccgaaggagcccatatcggtgtggcatcaggacgccatttctttccattacaccccc
gtgctggtgtgtaaaagccctctgcggactgtgggcctcggggacgccatatctgctgaaggactcctgtattcagaaat
ccatcctcattaaccaccgaataaagagatcactccatcgttcagac

Protein
Protein IDhabu1_s889_g03217.t1
Definition-
>habu1_s889_g03217.t1
MWRKALGVALLALTTGYVFWLDPTLPDSLWEHLSGSFLYQLRGDRGSPEGSMAEAWDALITQPAKQWNRVAVGVNACVDV
ILSGAKLLQALGFRGQGGKDHSVLRSAADLEEAFLHFMGKGAAAERFFSDADAFHRIAQMAASYPDAQLYVGGNAALIGQ
KIASHPDLKVLLCGPIGPKLHELLDENVMVPPESLQELDEYHLILEYQAGEEWGERRAPNANRFIFSHDLSNGAMNMLEV
FVSSLEEFQPDLVVLSGFHMMEGQTRELRQKRIREAVTSISDIPMDVPIHLELAGMTDPDLMREIIHQQIFPLVNSIGLN
EQELLFLSQAASGPHSSLTSWNGVPDVAVVSDIIFWILKEYGRTSAQASDLTRIHFHTLAYHLLVTVDGYWGNQVAAVAA
GARVAGTQACATQTIDASKVFLKAPLEFATSKMEGASRVSLNPKEPISVWHQDAISFHYTPVLVCKSPLRTVGLGDAISA
EGLLYSEIHPH
Protein IDhabu1_s889_g03217.t2
Definition-
>habu1_s889_g03217.t2
MWRKALGVALLALTTGYVFWLDPTLPDSLWEHLSGSFLYQLRGDRGSPEGSMAEAWDALITQPAKQWNRVAVGVNACVDV
ILSGAKLLQALGFRGQGGKDHSVLRSAADLEEAFLHFMGKGAAAERFFSDADAFHRIAQMAASYPDAQLYVGGNAALIGQ
KIASHPDLKVLLCGPIGPKLHELLDENVMVPPESLQELDEYHLILEYQAGEEWGERRAPNANRFIFSHDLSNGAMNMLEV
FVSSLEEFQPDLVVLSGFHMMEGQTRELRQKRIREAVTSISDIPMDVPIHLELAGMTDPDLMREIIHQQIFPLVNSIGLN
EQELLFLSQAASGPHSSLTSWNGVPDVAVVSDIIFWILKEYGRTSAQASDLTRIHFHTLAYHLLVTVDGYWGNQVAAVAA
GARVAGTQACATQTIDASKVFLKAPLEFATSKMEGASRVSLNPKEPISVWHQDAISFHYTPVLVCKSPLRTVGLGDAISA
EGLLYSEIHPH

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