Gene
| Gene Model ID | habu1_s889_g03219 |
|---|---|
| Locus | habu1_scaffold889 : 356903 ... 384075 : - |
| To GenomeBrowser | habu1_scaffold889:356903..384075 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase arih1 | EC:6.3.2.19 GO:0004842 GO:0005737 GO:0006511 GO:0008270 GO:0016567 GO:0031625 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03219.t1 | 1 | 1 | zf-C3HC4_2 | 74 | 121 | 1.7e-06 | 27.9 | 9.0e-10 | 1.7e-06 | 27.9 |
| habu1_s889_g03219.t1 | 2 | 1 | IBR | 145 | 205 | 8.7e-21 | 73.5 | 1.2e-17 | 2.3e-14 | 53.0 |
| habu1_s889_g03219.t1 | 2 | 2 | IBR | 210 | 270 | 8.7e-21 | 73.5 | 3.1e-10 | 5.7e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03219.t1 | gi|671032155|ref|XP_008706879.1| | PREDICTED: E3 ubiquitin-protein ligase ARIH1 [Ursus maritimus] | 0.0 |
| habu1_s889_g03219.t1 | gi|426233879|ref|XP_004010935.1| | 0.0 | |
| habu1_s889_g03219.t1 | gi|675748884|ref|XP_008970160.1| | PREDICTED: E3 ubiquitin-protein ligase ARIH1 [Pan paniscus] | 0.0 |
| habu1_s889_g03219.t1 | gi|637368175|ref|XP_008121525.1| | PREDICTED: E3 ubiquitin-protein ligase ARIH1 [Anolis carolinensis] | 0.0 |
| habu1_s889_g03219.t1 | gi|478494979|ref|XP_004421837.1| | PREDICTED: E3 ubiquitin-protein ligase ARIH1 [Ceratotherium simum simum] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 28.4 |
| Venom grand-1 | 25.6 |
| Pit, infrared sensing | 24.3 |
| Nose | 22.4 |
| Brain-1 | 22.8 |
| Eye | 32.0 |
| fetal fibroblast | 47.4 |
| venom gland-2 | 33.9 |
| Brain-2 | 19.7 |
| Spleen | 27.5 |
| Lung | 38.9 |
| Liver | 78.3 |
| Kidney | 26.7 |
| Pancreas | 42.1 |
| Small intestine | 26.7 |
| Large intestine | 31.3 |
| Stomach | 27.9 |
| heart | 45.1 |
| ovary | 99.3 |
| cheek muscle | 100.6 |
Transcript
| Transcript ID | habu1_s889_g03219.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03219.t1 cggcggaggaggcgggctgggccacgagcaggaggaggattaccgctacgaggtgctgacggccgagcagatcctgcagc acatggtggagtgcatccgagaggtcaacgaggtcatccagaacccggccaccatcaccaggatactcctcagtcatttc aactgggataaagaaaaactgatggagaggtactttgacggcaacctggagaagctgtttgcagaatgtcatgtcattaa tcctagtaaaaagtctcgaacacgtcagatgaacaccagatcatctgcacaggatatgccatgtcagatctgctatctca actatccgaattcgtatttcactggcttggagtgtggacacaagttttgcatgcagtgctggagtgaatatttaactacc aaaataatggaggagggcatgggacagacaatctcctgcccggctcacggctgtgatatcttggttgatgacaatacagt tatgcgcctgatcacagattcaaaagttaaattaaagtaccagcatttaataactaatagttttgtagagtgcaatcgac tgttaaaatggtgtcctgctccagattgccaccatgttgttaaagtacagtatcctgatgccaagcctgttcgctgtaaa tgtggccgtcagttttgttttaactgtggtgagaactggcatgatcctgttaaatgcaagtggttgaaaaaatggattaa gaaatgtgatgatgacagtgaaacttcgaattggattgcagcaaacacaaaggagtgtcccaaatgccatgtgaccatag aaaaagatggcggctgcaaccacatggtctgtcggaaccagaattgtaaagcagagttttgctgggtgtgtctcggcccg tgggagccgcatggatctgcctggtacaactgcaaccgctacaacgaggatgatgccaaggcagcaagggatgcccagga gcgctcgagagccgccttgcagcgatacctcttctactgcaaccgttacatgaaccacatgcagagcctgcgcttcgagc acaaactctacgcccaggtcaagcagaagatggaggagatgcagcagcacaacatgtcctggatcgaggtccagttcctg aaaaaagcggtcgacgtcctctgccagtgccgtgccacgctcatgtacacctatgtctttgccttctacctcaaaaagaa taaccaatccattatctttgagaataatcaagcagatttggagaatgctaccgaggtcctttctgggtacctggaacgag atatatctcaagattcactgcaggatataaagcagaaagtgcaagataaatacagatactgcgagagtcgacggagggtg ttattgcaacatgtgcatgaaggctatgaaaaggacctgtgggaatatattgaggactgaaagtggcctggataaaacga actcttaaaaatctcttcccatctagagtgctcataccattaaaacaaaacccacccacgcagacacaggaaaaaaaaac aaggggccaccctgcctattaacaccgctggtctatagtaccggaattctgtttgtttgttttttttttctctttttgtt catggaaaaaaaaaattaagtaaattatattgtaataaaaaaaggtagataaaccattgta |
|
Protein
| Protein ID | habu1_s889_g03219.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03219.t1 MVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLN YPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRL LKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIE KDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEH KLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERD ISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED |
|