Gene
| Gene Model ID | habu1_s889_g03220 |
|---|---|
| Locus | habu1_scaffold889 : 386266 ... 450423 : + |
| To GenomeBrowser | habu1_scaffold889:386266..450423 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta-hexosaminidase subunit alpha | EC:3.2.1.52 GO:0001501 GO:0001575 GO:0004563 GO:0005764 GO:0005975 GO:0006027 GO:0006040 GO:0006689 GO:0007040 GO:0007605 GO:0007628 GO:0016020 GO:0019915 GO:0019953 GO:0042552 GO:0048667 GO:0050884 GO:0050885 GO:0060395 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03220.t1 | 1 | 1 | Glycohydro_20b2 | 20 | 140 | 6.8e-18 | 65.5 | 1.0e-20 | 1.5e-17 | 64.4 |
| habu1_s889_g03220.t1 | 1 | 1 | Glyco_hydro_20 | 162 | 481 | 0.0 | 281.7 | 0.0 | 0.0 | 281.2 |
| habu1_s889_g03220.t1 | 1 | 1 | RVT_1 | 528 | 637 | 1.6e-17 | 63.5 | 2.6e-20 | 3.8e-17 | 62.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03220.t1 | gi|602654083|ref|XP_007432889.1| | PREDICTED: beta-hexosaminidase subunit alpha [Python bivittatus] | 0.0 |
| habu1_s889_g03220.t1 | gi|530572996|ref|XP_005281047.1| | PREDICTED: beta-hexosaminidase subunit alpha isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s889_g03220.t1 | gi|327289279|ref|XP_003229352.1| | PREDICTED: beta-hexosaminidase subunit alpha isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s889_g03220.t1 | gi|637368184|ref|XP_008121526.1| | PREDICTED: beta-hexosaminidase subunit alpha isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s889_g03220.t1 | gi|564240671|ref|XP_006277165.1| | PREDICTED: beta-hexosaminidase subunit alpha [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 24.2 |
| Venom grand-1 | 39.2 |
| Pit, infrared sensing | 40.4 |
| Nose | 18.3 |
| Brain-1 | 4.0 |
| Eye | 13.4 |
| fetal fibroblast | 37.4 |
| venom gland-2 | 48.8 |
| Brain-2 | 3.1 |
| Spleen | 20.8 |
| Lung | 28.0 |
| Liver | 55.3 |
| Kidney | 26.7 |
| Pancreas | 33.6 |
| Small intestine | 33.1 |
| Large intestine | 23.8 |
| Stomach | 21.6 |
| heart | 6.1 |
| ovary | 15.1 |
| cheek muscle | 11.4 |
Transcript
| Transcript ID | habu1_s889_g03220.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03220.t1 gcctctccgcgccgggcagtcgcgaatcctgcagggatggcgggcgtggcgggtgcgctgctcctgctcctggccaccgg cttgggcgctgccgtgtggccgcagccgcaggggatccgccaggacccccagagccgctgccggctcagctcccgccagt tccgattcgcccatgccaaccactcggcggcggagcccggctgcgaagtgctggacggggcgttccgacgttactggcag ctgcttttccctcctgggtacaaggagacaacagggagcaacatggaggacctgtgtcctaatcttctcatctccgtgac ccaagcaggatgcagtgactatcccacccttgaatcgccagaggactataagctcagcgtttcggtggatctgatgcttc tctcagccaccagcatctggggtgccctcagaggattggagaccttcagccagcttgcctggagggacgaagatgggaca ttctacctcaacaagacagatgtggttgatttccctcgcttccctcaccgaggtctgctccttgacacatctcgccatta tctgcctttgagagtcatcttggagaccctggatgtcatggcctacaacaaatttaacgtgttccactggcatattgtgg acgacccatcatttccgtttgaaagcatggtgttcccagacctcagcctgaagggatcctataactcagccactcacgta tacactgctaacgatgtgaaggtggtgattgaatatgcccggttgcgtgggattcgaatcattccagaatttgacacccc tggacacacactctcttggggaccaggtgtcccaggcttgttgactccatgttacgtatccacaaaacccagcggaacct atgggccggtcaaccccattcttaactccacctaccaattcatggcttcattttttgctgaagttagtgccatcttccca gatttctaccttcacctgggaggagatgaggtggatttcacctgctggaggtctaacccagacatccaagcttttatgca gaaaatgcaatttggccaagactataccaaattagaatccttctacattcaaaggctgctggatatagtctcctcttaca agaaaggctacatggtgtggcaagaagtctttgacaaccgtgtgaaggtgaaccctaatacagtcatacacgtgtggaaa gcgaaccccgtcacctttcaagaggagatgtctcgtgtcacgcaggctggtttccagaccctgctgtcctccccttggta cttgaacgtcatctcttacgggcaggattggttggcagcgtatcgggtggagcctctggacttcaaaggcagcgcagaac aaaagaagctggttattggtggagaagcctgtatgtggggcgaatacgtggatgcaaccaatttaaacccaagactgtgg cccagagctggggctgttgctgagcgtttgtggagcaacgagacagttcgaaaccagcgagatgcttatgcccgcttgtc agatttccgatgcaccttgctcagctctggaggccatgcgactctcgtgcgacttccagaaaatctggggaatatcacga gaccatatctagacctagacaacatcaccaccaggtggatctgtagctggctgacaaaccctactgaacgagtagtcctc aatggcactacatccacatggagagaagtaagcagtggggtaccacaaggctccgtcttaggcccagtactcttcaatat cttcgtcaatgacttagacgagggaattgaaggggaactcgtcaaatttgcagatgacaccaaactggcaggaatagcca acgccccagaagacaaactcaggatccaaacagatctcgacaaactggaacaatgggccctatccaagaaaatgagcttc aatgtggagaaaatctttgggatgacctccgaggtcccttccaactttatcatcatcatcatcatcatcatcgtcgtcgt cgtcgtcatcgtcgtcgtcgtcattattattattattattattattatatttattaataataataataataacaataata ataatatgattgttaaatcaatcgccgtagttgttgagttagtaacacggttcttaagtgattctggattctccattgac tttgctcatcatgaagttgcaaaaggggatgatatgatctcggaacgctgcaaccctcataaatttgagccagttgccaa gcgtctgaatcttgatcatgtgaccacagggatgctgcaacagttccagacatcctgcctgctggatgccatcctgagaa ggtgctcctttgggggggagaggcagagcagccccaatgcgtcggaaatattgtccaagatgacaaagttggacagagct cagaagaaagctggagaacgatgttcctccggatcttatgggacttcagctcccgctattctcaaccaatatggtgccaa gaacctcagcgcaacagggatatcgtagtgcccacccctgcaatgctgttacatttcagagtcctgctttagagaatgga cagttcaagggaataaatgcttttgggataacaaggttt |
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Protein
| Protein ID | habu1_s889_g03220.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03220.t1 MAGVAGALLLLLATGLGAAVWPQPQGIRQDPQSRCRLSSRQFRFAHANHSAAEPGCEVLDGAFRRYWQLLFPPGYKETTG SNMEDLCPNLLISVTQAGCSDYPTLESPEDYKLSVSVDLMLLSATSIWGALRGLETFSQLAWRDEDGTFYLNKTDVVDFP RFPHRGLLLDTSRHYLPLRVILETLDVMAYNKFNVFHWHIVDDPSFPFESMVFPDLSLKGSYNSATHVYTANDVKVVIEY ARLRGIRIIPEFDTPGHTLSWGPGVPGLLTPCYVSTKPSGTYGPVNPILNSTYQFMASFFAEVSAIFPDFYLHLGGDEVD FTCWRSNPDIQAFMQKMQFGQDYTKLESFYIQRLLDIVSSYKKGYMVWQEVFDNRVKVNPNTVIHVWKANPVTFQEEMSR VTQAGFQTLLSSPWYLNVISYGQDWLAAYRVEPLDFKGSAEQKKLVIGGEACMWGEYVDATNLNPRLWPRAGAVAERLWS NETVRNQRDAYARLSDFRCTLLSSGGHATLVRLPENLGNITRPYLDLDNITTRWICSWLTNPTERVVLNGTTSTWREVSS GVPQGSVLGPVLFNIFVNDLDEGIEGELVKFADDTKLAGIANAPEDKLRIQTDLDKLEQWALSKKMSFNVEKIFGMTSEV PSNFIIIIIIIIVVVVVIVVVVIIIIIIIIIFINNNNNNNNNNMIVKSIAVVVELVTRFLSDSGFSIDFAHHEVAKGDDM ISERCNPHKFEPVAKRLNLDHVTTGMLQQFQTSCLLDAILRRCSFGGERQSSPNASEILSKMTKLDRAQKKAGERCSSGS YGTSAPAILNQYGAKNLSATGIS |
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