Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s889_g03223
Locus habu1_scaffold889 : 586564 ... 617899 : -
To GenomeBrowser habu1_scaffold889:586564..617899
Genes list of scaffold habu1_scaffold889

Annotation by Blast2GO
Annotation GO
poly (adp-ribose) polymerase member isoform cra_b EC:2.4.2.30 GO:0003950 GO:0008152

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.6
Venom grand-1 1.8
Pit, infrared sensing 3.9
Nose 6.7
Brain-1 10.4
Eye 9.5
fetal fibroblast 2.8
venom gland-2 2.1
Brain-2 10.8
Spleen 4.3
Lung 4.3
Liver 3.3
Kidney 4.0
Pancreas 6.1
Small intestine 2.3
Large intestine 2.7
Stomach 2.5
heart 3.2
ovary 5.1
cheek muscle 1.4

Transcript
Transcript IDhabu1_s889_g03223.t1
Definition-
>habu1_s889_g03223.t1
cctggagcattccctcgcagaggtctccccatcagggtggcaatagctgaggcggagtttccccggaccaatgaggaggc
gctgacgtcaccaccgccgcgccgccgccgccgccgcttcctcgcggacggagccttggttgccggggcgacggaggaat
cggccgcccggcctgaccccgaggcctcctctccccgcgcccggcccggatgcccgtctggcagctcgcaggctggcggc
tggtggcatggaggggcgaggcccggccctgagcggaaagcagcgcctctgaacccgccaggcaaatggacatcaaaggc
cagtactggactgatgatgattctgatggagaaaatgagtccgaggaatttttatatggagtacagggaacctgtgccgc
agacctgtatcgacaccctcagctggatgtggacattgaagccgtgaaagaactctacagtgagaattctgtctctgtcc
gggaatatgggaccatcgatgacgtggacattgacctgcacatcaacatcggcttcctagatgaggaggttgcaacagcc
tggaaggtcctacggaccgagcccatcattctccgactgcggttctccctttcccagtatctggatggccccgaaccgtc
catcgaggttttccaaccatccaacaaggaagggtttggactgggcctgcagctgaagaagatcctgggcatgttcacat
cccagcaatggaaacacctcagcaacgacttcctcaagactcagcaggaaaagcggcacagctggttcaaagccagtggc
acaatcaaaaaattccgtgccggtctcagcatcttttcacccattcccaagtctcccagttttcccgtcatccaggactc
gatgctcaagggcaaacttggcgtcccagagctacgggtcaaccgcctcatgaaccgctctatctcctgcacgatgaaga
attctaaggtggaagtttttggctaccctcccagcacccaggcaggtgtcgtcccattcaacatcctggttggtggccac
tgcaaaaacatccccaccttggaatatggttttctcgtccagataatgaaatatgcagagcagaggattcctactttgaa
cgagtactgtgtggtatgtgacgaacagcacgtcttccagaatgggtccatgctgaagccagctgtgtgcacccgagagc
tctgtgtgttctctttctacaccttgggtgtgatgtccggtgctgcagaagaggtggccacgggagcagaggtagtcgac
ctgctggtggccatgtgccgggcggctttggaatccccacgcaagagcatcatctttgagccttacccatctgttgtgga
tcccagtgaccccaagacccttgccttcaaccccaagaaaaagaattatgagaggctgcagaaggccctggacagcgtca
tgtcaatccgtgaaatgactcaaggttcttacctggagatcaagaagcaaatggacaagttggatcctttggcccatccc
ctcctacagtggataatttccagcaacagatctcacattgtcaagctacctctcagcaggctgaaatttatgcacacctc
acaccagtttctcctgctgagcagccctcctgcgaaagaggctcgcttccggacagccaagaaactgtacggcagcacct
tcgccttccatggctctcacattgagaattggcattccattctgcgcaatgggctggtcaatgcatcctacaccaaactg
cagggatggggaaagggcagcaccggatgccctccaaggatgagctggtgcagaggtacaaccggatgaacacaattccc
cagacacgatccatccagtccagattcctacagagtcgcaatctgaactgcatcgcactttgtgaagtgatcacatcaaa
ggatctccagaagcatggcaacatctgggtttgtcctgtgtctgatcacgtctgcacccgctttttctttgtgtacgaag
atggccaagtcggagacgccaacatcaatactcaggaccctaaaattcagaaggagatcatgcgtgtaattggcactcag
gtctatacaaattgagaaggtggaggagcccctcccttcagactgggctggcgctgcccctggggcaggaaagggaccgt
tgttggagaccatacatggactctgcccggctgaagacagacccaccggagggagcgaccgctgtcaacgtctggaccac
ggatgccaggggggacctctctggaggggggcgcagcagctccaccccgcccatccgtagagttgagtgggtggacttgg
accaattcctgtgaacggttggaatggttgtgtttgcatgcccacgttttcaaggacggcatttttaaccgtgaaaacga
gcaaaaacaaaaacaaccccccacacacacacaatgaaacagagagccccagagagagagagagaacgtgtgcgtgcaag
caagcggttttagcttattaaaattctctttgaaagaaaaaaaa
Transcript IDhabu1_s889_g03223.t2
Definition-
>habu1_s889_g03223.t2
ggacggagccttggttgccggggcgacggaggaatcggccgcccggcctgaccccgaggcctcctctccccgcgcccggc
ccggatgcccgtctggcagctcgcaggctggcggctggtggcatggaggggcgaggcccggccctgagcggaaagcagcg
cctctgaacccgccaggcaaatggacatcaaaggccagtactggactgatgatgattctgatggagaaaatgagtccgag
gaatttttatatggagtacaggtcaggcccttgtgacctctgaaaggtcaagatgatgagttatggtgacttacttaagg
gaacctgtgccgcagacctgtatcgacaccctcagctggatgtggacattgaagccgtgaaagaactctacagtgagaat
tctgtctctgtccgggaatatgggaccatcgatgacgtggacattgacctgcacatcaacatcggcttcctagatgagga
ggttgcaacagcctggaaggtcctacggaccgagcccatcattctccgactgcggttctccctttcccagtatctggatg
gccccgaaccgtccatcgaggttttccaaccatccaacaaggaagggtttggactgggcctgcagctgaagaagatcctg
ggcatgttcacatcccagcaatggaaacacctcagcaacgacttcctcaagactcagcaggaaaagcggcacagctggtt
caaagccagtggcacaatcaaaaaattccgtgccggtctcagcatcttttcacccattcccaagtctcccagttttcccg
tcatccaggactcgatgctcaagggcaaacttggcgtcccagagctacgggtcaaccgcctcatgaaccgctctatctcc
tgcacgatgaagaattctaaggtggaagtttttggctaccctcccagcacccaggcaggtgtcgtcccattcaacatcct
ggttggtggccactgcaaaaacatccccaccttggaatatggttttctcgtccagataatgaaatatgcagagcagagga
ttcctactttgaacgagtactgtgtggtatgtgacgaacagcacgtcttccagaatgggtccatgctgaagccagctgtg
tgcacccgagagctctgtgtgttctctttctacaccttgggtgtgatgtccggtgctgcagaagaggtggccacgggagc
agaggtagtcgacctgctggtggccatgtgccgggcggctttggaatccccacgcaagagcatcatctttgagccttacc
catctgttgtggatcccagtgaccccaagacccttgccttcaaccccaagaaaaagaattatgagaggctgcagaaggcc
ctggacagcgtcatgtcaatccgtgaaatgactcaaggttcttacctggagatcaagaagcaaatggacaagttggatcc
tttggcccatcccctcctacagtggataatttccagcaacagatctcacattgtcaagctacctctcagcaggctgaaat
ttatgcacacctcacaccagtttctcctgctgagcagccctcctgcgaaagaggctcgcttccggacagccaagaaactg
tacggcagcaccttcgccttccatggctctcacattgagaattggcattccattctgcgcaatgggctggtcaatgcatc
ctacaccaaactgcagtcctcgacttacgaccggtttagtcctcgacttacgaccgggatggggaaagggcagcaccgga
tgccctccaaggatgagctggtgcagaggtacaaccggatgaacacaattccccagacacgatccatccagtccagattc
ctacagagtcgcaatctgaactgcatcgcactttgtgaagtgatcacatcaaaggatctccagaagcatggcaacatctg
ggtttgtcctgtgtctgatcacgtctgcacccgctttttctttgtgtacgaagatggccaagtcggagacgccaacatca
atactcaggaccctaaaattcagaaggagatcatgcgtgtaattggcactcaggtctatacaaattgagaaggtggagga
gcccctcccttcagactgggctggcgctgcccctggggcaggaaagggaccgttgttggagaccatacatggactctgcc
cggctgaagacagacccaccggagggagcgaccgctgtcaacgtctggaccacggatgccaggggggacctctctggagg
ggggcgcagcagctccaccccgcccatccgtagagttgagtgggtggacttggaccaattcctgtgaacggttggaatgg
ttgtgtttgcatgcccacgttttcaaggacggcatttttaaccgtgaaaacgagcaaaaacaaaaacaaccccccacaca
cacacaatgaaacagagagccccagagagagagagagaacgtgtgcgtgcaagcaagcggttttagcttattaaaattct
ctttgaaagaaaaaaaa
Transcript IDhabu1_s889_g03223.t3
Definition-
>habu1_s889_g03223.t3
cctggagcattccctcgcagaggtctccccatcagggtggcaatagctgaggcggagtttccccggaccaatgaggaggc
gctgacgtcaccaccgccgcgccgccgccgccgccgcttcctcgcggacggagccttggttgccggggcgacggaggaat
cggccgcccggcctgaccccgaggcctcctctccccgcgcccggcccggatgcccgtctggcagctcgcaggctggcggc
tggtggcatggaggggcgaggcccggccctgagcggaaagcagcgcctctgaacccgccaggcaaatggacatcaaaggc
cagtactggactgatgatgattctgatggagaaaatgagtccgaggaatttttatatggagtacagggaacctgtgccgc
agacctgtatcgacaccctcagctggatgtggacattgaagccgtgaaagaactctacagtgagaattctgtctctgtcc
gggaatatgggaccatcgatgacgtggacattgacctgcacatcaacatcggcttcctagatgaggaggttgcaacagcc
tggaaggtcctacggaccgagcccatcattctccgactgcggttctccctttcccagtatctggatggccccgaaccgtc
catcgaggttttccaaccatccaacaaggaagggtttggactgggcctgcagctgaagaagatcctgggcatgttcacat
cccagcaatggaaacacctcagcaacgacttcctcaagactcagcaggaaaagcggcacagctggttcaaagccagtggc
acaatcaaaaaattccgtgccggtctcagcatcttttcacccattcccaagtctcccagttttcccgtcatccaggactc
gatgctcaagggcaaacttggcgtcccagagctacgggtcaaccgcctcatgaaccgctctatctcctgcacgatgaaga
attctaaggtggaagtttttggctaccctcccagcacccaggttggtggccactgcaaaaacatccccaccttggaatat
ggttttctcgtccagataatgaaatatgcagagcagaggattcctactttgaacgagtactgtgtggtatgtgacgaaca
gcacgtcttccagaatgggtccatgctgaagccagctgtgtgcacccgagagctctgtgtgttctctttctacaccttgg
gtgtgatgtccggtgctgcagaagaggtggccacgggagcagaggtagtcgacctgctggtggccatgtgccgggcggct
ttggaatccccacgcaagagcatcatctttgagccttacccatctgttgtggatcccagtgaccccaagacccttgcctt
caaccccaagaaaaagaattatgagaggctgcagaaggccctggacagcgtcatgtcaatccgtgaaatgactcaaggtt
cttacctggagatcaagaagcaaatggacaagttggatcctttggcccatcccctcctacagtggataatttccagcaac
agatctcacattgtcaagctacctctcagcaggctgaaatttatgcacacctcacaccagtttctcctgctgagcagccc
tcctgcgaaagaggctcgcttccggacagccaagaaactgtacggcagcaccttcgccttccatggctctcacattgaga
attggcattccattctgcgcaatgggctggtcaatgcatcctacaccaaactgcagtcctcgacttacgaccggtttagt
cctcgacttacgaccgggatggggaaagggcagcaccggatgccctccaaggatgagctggtgcagaggtacaaccggat
gaacacaattccccagacacgatccatccagtccagattcctacagagtcgcaatctgaactgcatcgcactttgtgaag
tgatcacatcaaaggatctccagaagcatggcaacatctgggtttgtcctgtgtctgatcacgtctgcacccgctttttc
tttgtgtacgaagatggccaagtcggagacgccaacatcaatactcaggaccctaaaattcagaaggagatcatgcgtgt
aattggcactcaggtctatacaaattgagaaggtggaggagcccctcccttcagactgggctggcgctgcccctggggca
ggaaagggaccgttgttggagaccatacatggactctgcccggctgaagacagacccaccggagggagcgaccgctgtca
acgtctggaccacggatgccaggggggacctctctggaggggggcgcagcagctccaccccgcccatccgtagagttgag
tgggtggacttggaccaattcctgtgaacggttggaatggttgtgtttgcatgcccacgttttcaaggacggcattttta
accgtgaaaacgagcaaaaacaaaaacaaccccccacacacacacaatgaaacagagagccccagagagagagagagaac
gtgtgcgtgcaagcaagcggttttagcttattaaaattctctttgaaagaaaaaaaa
Transcript IDhabu1_s889_g03223.t4
Definition-
>habu1_s889_g03223.t4
cctggagcattccctcgcagaggtctccccatcagggtggcaatagctgaggcggagtttccccggaccaatgaggaggc
gctgacgtcaccaccgccgcgccgccgccgccgccgcttcctcgcggacggagccttggttgccggggcgacggaggaat
cggccgcccggcctgaccccgaggcctcctctccccgcgcccggcccggatgcccgtctggcagctcgcaggctggcggc
tggtggcatggaggggcgaggcccggccctgagcggaaagcagcgcctctgaacccgccaggcaaatggacatcaaaggc
cagtactggactgatgatgattctgatggagaaaatgagtccgaggaatttttatatggagtacagggaacctgtgccgc
agacctgtatcgacaccctcagctggatgtggacattgaagccgtgaaagaactctacagtgagaattctgtctctgtcc
gggaatatgggaccatcgatgacgtggacattgacctgcacatcaacatcggcttcctagatgaggaggttgcaacagcc
tggaaggtcctacggaccgagcccatcattctccgactgcggttctccctttcccagtatctggatggccccgaaccgtc
catcgaggttttccaaccatccaacaaggaagggtttggactgggcctgcagctgaagaagatcctgggcatgttcacat
cccagcaatggaaacacctcagcaacgacttcctcaagactcagcaggaaaagcggcacagctggttcaaagccagtggc
acaatcaaaaaattccgtgccggtctcagcatcttttcacccattcccaagtctcccagttttcccgtcatccaggactc
gatgctcaagggcaaacttggcgtcccagagctacgggtcaaccgcctcatgaaccgctctatctcctgcacgatgaaga
attctaaggtggaagtttttggctaccctcccagcacccaggcaggtgtcgtcccattcaacatcctggttggtggccac
tgcaaaaacatccccaccttggaatatggttttctcgtccagataatgaaatatgcagagcagaggattcctactttgaa
cgagtactgtgtggtatgtgacgaacagcacgtcttccagaatgggtccatgctgaagccagctgtgtgcacccgagagc
tctgtgtgttctctttctacaccttgggtgtgatgtccggtgctgcagaagaggtggccacgggagcagaggtagtcgac
ctgctggtggccatgtgccgggcggctttggaatccccacgcaagagcatcatctttgagccttacccatctgttgtgga
tcccagtgaccccaagacccttgccttcaaccccaagaaaaagaattatgagaggctgcagaaggccctggacagcgtca
tgtcaatccgtgaaatgactcaaggttcttacctggagatcaagaagcaaatggacaagttggatcctttggcccatccc
ctcctacagtggataatttccagcaacagatctcacattgtcaagctacctctcagcaggctgaaatttatgcacacctc
acaccagtttctcctgctgagcagccctcctgcgaaagaggctcgcttccggacagccaagaaactgtacggcagcacct
tcgccttccatggctctcacattgagaattggcattccattctgcgcaatgggctggtcaatgcatcctacaccaaactg
cagtcctcgacttacgaccggtttagtcctcgacttacgaccgggatggggaaagggcagcaccggatgccctccaagga
tgagctggtgcagaggtacaaccggatgaacacaattccccagacacgatccatccagtccagattcctacagagtcgca
atctgaactgcatcgcactttgtgaagtgatcacatcaaaggatctccagaagcatggcaacatctgggtttgtcctgtg
tctgatcacgtctgcacccgctttttctttgtgtacgaagatggccaagtcggagacgccaacatcaatactcaggaccc
taaaattcagaaggagatcatgcgtgtaattggcactcaggtctatacaaattgagaaggtggaggagcccctcccttca
gactgggctggcgctgcccctggggcaggaaagggaccgttgttggagaccatacatggactctgcccggctgaagacag
acccaccggagggagcgaccgctgtcaacgtctggaccacggatgccaggggggacctctctggaggggggcgcagcagc
tccaccccgcccatccgtagagttgagtgggtggacttggaccaattcctgtgaacggttggaatggttgtgtttgcatg
cccacgttttcaaggacggcatttttaaccgtgaaaacgagcaaaaacaaaaacaaccccccacacacacacaatgaaac
agagagccccagagagagagagagaacgtgtgcgtgcaagcaagcggttttagcttattaaaattctctttgaaagaaaa
aaaa

Protein
Protein IDhabu1_s889_g03223.t1
Definition-
>habu1_s889_g03223.t1
MDIKGQYWTDDDSDGENESEEFLYGVQGTCAADLYRHPQLDVDIEAVKELYSENSVSVREYGTIDDVDIDLHINIGFLDE
EVATAWKVLRTEPIILRLRFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQQWKHLSNDFLKTQQEKRHSW
FKASGTIKKFRAGLSIFSPIPKSPSFPVIQDSMLKGKLGVPELRVNRLMNRSISCTMKNSKVEVFGYPPSTQAGVVPFNI
LVGGHCKNIPTLEYGFLVQIMKYAEQRIPTLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATG
AEVVDLLVAMCRAALESPRKSIIFEPYPSVVDPSDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLD
PLAHPLLQWIISSNRSHIVKLPLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNA
SYTKLQGWGKGSTGCPPRMSWCRGTTG
Protein IDhabu1_s889_g03223.t2
Definition-
>habu1_s889_g03223.t2
MMSYGDLLKGTCAADLYRHPQLDVDIEAVKELYSENSVSVREYGTIDDVDIDLHINIGFLDEEVATAWKVLRTEPIILRL
RFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQQWKHLSNDFLKTQQEKRHSWFKASGTIKKFRAGLSIFS
PIPKSPSFPVIQDSMLKGKLGVPELRVNRLMNRSISCTMKNSKVEVFGYPPSTQAGVVPFNILVGGHCKNIPTLEYGFLV
QIMKYAEQRIPTLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATGAEVVDLLVAMCRAALESP
RKSIIFEPYPSVVDPSDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDPLAHPLLQWIISSNRSHI
VKLPLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQSSTYDRFSPRLT
TGMGKGQHRMPSKDELVQRYNRMNTIPQTRSIQSRFLQSRNLNCIALCEVITSKDLQKHGNIWVCPVSDHVCTRFFFVYE
DGQVGDANINTQDPKIQKEIMRVIGTQVYTN
Protein IDhabu1_s889_g03223.t3
Definition-
>habu1_s889_g03223.t3
MDIKGQYWTDDDSDGENESEEFLYGVQGTCAADLYRHPQLDVDIEAVKELYSENSVSVREYGTIDDVDIDLHINIGFLDE
EVATAWKVLRTEPIILRLRFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQQWKHLSNDFLKTQQEKRHSW
FKASGTIKKFRAGLSIFSPIPKSPSFPVIQDSMLKGKLGVPELRVNRLMNRSISCTMKNSKVEVFGYPPSTQVGGHCKNI
PTLEYGFLVQIMKYAEQRIPTLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATGAEVVDLLVA
MCRAALESPRKSIIFEPYPSVVDPSDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDPLAHPLLQW
IISSNRSHIVKLPLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQSST
YDRFSPRLTTGMGKGQHRMPSKDELVQRYNRMNTIPQTRSIQSRFLQSRNLNCIALCEVITSKDLQKHGNIWVCPVSDHV
CTRFFFVYEDGQVGDANINTQDPKIQKEIMRVIGTQVYTN
Protein IDhabu1_s889_g03223.t4
Definition-
>habu1_s889_g03223.t4
MDIKGQYWTDDDSDGENESEEFLYGVQGTCAADLYRHPQLDVDIEAVKELYSENSVSVREYGTIDDVDIDLHINIGFLDE
EVATAWKVLRTEPIILRLRFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQQWKHLSNDFLKTQQEKRHSW
FKASGTIKKFRAGLSIFSPIPKSPSFPVIQDSMLKGKLGVPELRVNRLMNRSISCTMKNSKVEVFGYPPSTQAGVVPFNI
LVGGHCKNIPTLEYGFLVQIMKYAEQRIPTLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATG
AEVVDLLVAMCRAALESPRKSIIFEPYPSVVDPSDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLD
PLAHPLLQWIISSNRSHIVKLPLSRLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNA
SYTKLQSSTYDRFSPRLTTGMGKGQHRMPSKDELVQRYNRMNTIPQTRSIQSRFLQSRNLNCIALCEVITSKDLQKHGNI
WVCPVSDHVCTRFFFVYEDGQVGDANINTQDPKIQKEIMRVIGTQVYTN

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Okinawa Institute of Science and Technology
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