Gene
| Gene Model ID | habu1_s889_g03224 |
|---|---|
| Locus | habu1_scaffold889 : 629490 ... 646990 : + |
| To GenomeBrowser | habu1_scaffold889:629490..646990 |
| Genes list of scaffold | habu1_scaffold889 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03224.t1 | 1 | 1 | Nucleos_tra2_N | 177 | 248 | 3.8e-21 | 75.2 | 1.0e-24 | 3.8e-21 | 75.2 |
| habu1_s889_g03224.t1 | 1 | 1 | Gate | 257 | 353 | 8.3e-08 | 32.1 | 2.2e-11 | 8.3e-08 | 32.1 |
| habu1_s889_g03224.t1 | 1 | 1 | Nucleos_tra2_C | 360 | 583 | 0.0 | 237.2 | 0.0 | 0.0 | 233.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03224.t1 | gi|637354188|ref|XP_008118905.1| | PREDICTED: sodium/nucleoside cotransporter 1-like [Anolis carolinensis] | 0.0 |
| habu1_s889_g03224.t1 | gi|602635752|ref|XP_007424738.1| | PREDICTED: sodium/nucleoside cotransporter 1-like [Python bivittatus] | 0.0 |
| habu1_s889_g03224.t1 | gi|591382882|ref|XP_007065905.1| | PREDICTED: sodium/nucleoside cotransporter 2 [Chelonia mydas] | 0.0 |
| habu1_s889_g03224.t1 | gi|564238508|ref|XP_006276121.1| | PREDICTED: sodium/nucleoside cotransporter 2-like [Alligator mississippiensis] | 0.0 |
| habu1_s889_g03224.t1 | gi|557270164|ref|XP_006020368.1| | PREDICTED: sodium/nucleoside cotransporter 2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.2 |
| Pancreas | 0.2 |
| Small intestine | 84.9 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 3.4 |
| ovary | 0.1 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s889_g03224.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03224.t1 agtactaaccactatacgatcacggcgagccacccaggcgctggggaaacagctcggcaaccaccttcttcatttctaca ttccctgacgtcattgggtcttcgaatggggaattcatgcctgtctcgcacagcgccacctttgactgaagtggtaagaa aagggcttcttcttcattctgagggtgagctgggcagagattgattttgctaacacaccaaggtggaggtagcagcttca gaaccaccaagacaatggacgaagtcaagatttcagctaaaaatggtgataagggcttggcaaatccaggatttgaggat acagaatcagagacaaatggaaacgaagcaccatatcttgagattttggaagaaaaccctgtgcagaagagtcattttgg gagcagattcaagaatgtggctcagcctttctcgaaagcaaagagtttttacaagactcatcgtgaattattccacaagg tcttcttaggcatcttatgtgcaggctacctggcctacttcattgctgcttgttatctggactaccatcgggccttggcg ctgatcattctaacaagcctggcccttgctttgctggcttatagtatagtcaaaaaatatttgggagccaagattatcca gatgttcagcccttgcaggaaatgctgtcagaaggcctggccgtggttgaaatgggttttgtgtgccattcttctgattg gtttgatcacatggctggttctggacgtgtcccagaggaaagagcagctggtctcattgggagggttctgcgttctggtg ttcttgttatttctcttctccaagcatcacatggctgtatcctggagggctgttttctggggcctcggtctacagtttgt ccttggaatcttcattatccgaactgaaccgggatttcaagctttccaatggctgggcaatcagattcagatatttctta actataccactgctggatccagctttgtctttggggagaaactgatccaagaaagttttgcctttcaggctttgcccatt attgtcttcttcagctgtgtgatgtccatcctctactacttgggagtcatgcagtttatgatcctgaagttgtcctggct cctgcaaatcacaatgggcacagcagccaccgaatccctgagcgtggtggggaatatatttgtggggatgaccgaagcac cactgctcatccgcccgtacctgggggacatgacacgttcagaagtccatgctgtaatgacaggtggctttgctaccatt gctggtagtgtgatgggcgcatacatttcatttgggattgatgcctcctctttgatcgcagcttcagttatggcagcacc ttgtgctttagctatggccaaacttgtctacccagaagtggaaacgtccaaattccaaagctgcgaagggatcaaaattg cctgcggggaggaaaagaatattctggaagctgctggtaatggtgcctgtgtctctgtggggctggtggccaacattgca gccaacctcatcgccttcctggctgtgctggcattcatcaatgctgccctcagttggctaggagggatggtcaacttgcc ccaactctccttccagctgatctgctcatacgtcctgatgcctttagccttcttgttaggggcgagctgggaagatgctt ccctggttgctgagatgttgggaatcaagttcttcttaaatgaatttgtggcctaccagcaattgtcaacatacaaaaac gatcgcctgatgggtctgcccgagtgggatggttctcaaaagcagtggatttcgcccagagctgaaaccattttaacctt tgctctgtgtggatttgccaacctgagctctattgggatcatgctgggtggcttgacttcgatggcaccgcaacgcaaga gtgaattttccagcgttgttctacgagctttgatcaccggagccaccgtctccctaatcaatgcatgcattgcaggaatc ctctatgtgcccagagatgtccctgactgtctggacctctttagcaataccgtcatcaactctaccagctactctctgca tgaatgctgcaaagacttgttcggcagttccttacctagttccaatggatccctcccttttaatggcatctgggacaccc taaactccaacacaacacagacctatctccagaaatgctgtggttattatagctcctccatatgtcccaaatgagatgat gtagaagaagaggacaattcaccggatatgtagaggatgaataaaggaaggggtggtggttgaaaaaattcacgggattg tgagagaaagtaaaaaaaggggggttgaggagcaacatctcaccttcaacggtaaacgaaagggttttgtcaactctgat gaagaatgcaaagctgcattgtaatgtatgaaaagaatcctctgggtttttctacttcgaagtgctccaggccaaacacc gcgcaaacatgacactcctttcggcgatttaattttgtgacaatgcaaagaagagttcaagcagtgggtcttctcccaaa gttgctctcggcagaaatggtcaaacctttttttacaattataccccaatgcaactgagccctagaagttccactccgcc ttcctttgacctcttcgcattcatttctgttggctcttcagtcgcagaggtggctacgcgtgtctacccacggaaaagcc cacggaatttcaaggagagttatatgctcgagagaaaaccccactaatctcggagtttcttcccaagtaattttaaaaaa aaccctcaaacttggcaggtggcaaaattacttgctttgaaaataaaccaatgtcctcattcatatttt |
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Protein
| Protein ID | habu1_s889_g03224.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03224.t1 MDEVKISAKNGDKGLANPGFEDTESETNGNEAPYLEILEENPVQKSHFGSRFKNVAQPFSKAKSFYKTHRELFHKVFLGI LCAGYLAYFIAACYLDYHRALALIILTSLALALLAYSIVKKYLGAKIIQMFSPCRKCCQKAWPWLKWVLCAILLIGLITW LVLDVSQRKEQLVSLGGFCVLVFLLFLFSKHHMAVSWRAVFWGLGLQFVLGIFIIRTEPGFQAFQWLGNQIQIFLNYTTA GSSFVFGEKLIQESFAFQALPIIVFFSCVMSILYYLGVMQFMILKLSWLLQITMGTAATESLSVVGNIFVGMTEAPLLIR PYLGDMTRSEVHAVMTGGFATIAGSVMGAYISFGIDASSLIAASVMAAPCALAMAKLVYPEVETSKFQSCEGIKIACGEE KNILEAAGNGACVSVGLVANIAANLIAFLAVLAFINAALSWLGGMVNLPQLSFQLICSYVLMPLAFLLGASWEDASLVAE MLGIKFFLNEFVAYQQLSTYKNDRLMGLPEWDGSQKQWISPRAETILTFALCGFANLSSIGIMLGGLTSMAPQRKSEFSS VVLRALITGATVSLINACIAGILYVPRDVPDCLDLFSNTVINSTSYSLHECCKDLFGSSLPSSNGSLPFNGIWDTLNSNT TQTYLQKCCGYYSSSICPK |
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