Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s889_g03228
Locus habu1_scaffold889 : 749630 ... 757019 : -
To GenomeBrowser habu1_scaffold889:749630..757019
Genes list of scaffold habu1_scaffold889

Annotation by Blast2GO
Annotation GO
dual oxidase maturation factor 2 GO:0044425

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s889_g03228.t1 1 1 DuoxA 9 287 0.0 366.7 0.0 0.0 366.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s889_g03228.t1 gi|602635760|ref|XP_007424742.1| PREDICTED: dual oxidase maturation factor 2 [Python bivittatus] 0.0
habu1_s889_g03228.t1 gi|530572887|ref|XP_005280995.1| PREDICTED: dual oxidase maturation factor 2 [Chrysemys picta bellii] 0.0
habu1_s889_g03228.t1 gi|705664498|ref|XP_010128375.1| PREDICTED: dual oxidase maturation factor 2-like [Chlamydotis macqueenii] 0.0
habu1_s889_g03228.t1 gi|700350851|ref|XP_009919579.1| PREDICTED: dual oxidase maturation factor 2-like, partial [Haliaeetus albicilla] 0.0
habu1_s889_g03228.t1 gi|729748055|ref|XP_010570526.1| PREDICTED: dual oxidase maturation factor 2 [Haliaeetus leucocephalus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.6
Venom grand-1 0.0
Pit, infrared sensing 0.3
Nose 16.0
Brain-1 0.1
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.4
Brain-2 0.0
Spleen 0.0
Lung 5.2
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.2
Large intestine 2.2
Stomach 0.9
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s889_g03228.t1
Definition-
>habu1_s889_g03228.t1
tccgatctccttggaaggcgcaggcgaagcatctccgatccgcagcaaacatgaccttctttgatggcgtctaccccttc
tacccccaatccaagaagcccttcgtcttcgacgtggacctgattattgtcattatcgtctttctggtgatcgccttcag
cttcttgctgatcctgcccggaattcgaggcagagcgaggctatattggcttattcgggtcatctccagcctctttatcg
gaggagtgattgtcgctgtccacttctcctctgactgggagaccgggacggtgacagccaacacctcctacaaatccttc
agctccgccatgatccatgcagacattgggctgcacgttggcttgtccggagtcaacatcaccctggttggaaaacccgt
ggaccaactcaacgaaaccatcaattataacgaagagttctcctggtggtttgggaccaactatgataaagagtttgaag
aggggctgaaacggggattacccagccccatcatttacgtggcagagaagttcaccgaccacagcccttgtggcttgaac
aatgtctaccgcatggcgggccactatgcgtctgcaaccctctgggtggccttctgtgcgtggctggtctccaacatgct
cttctccatgccggtcccggtttatggcggcttcatgcttcttgtcacgggggccttcctcatcttcgcactcctgtcct
tctccacggggaggaatgcctggtgtgccatccagtttggcttggcgtccctgaaactggcctatggggcatctttctgg
ctcactttggccacagggctcttctgcttccttgttggcatagtggtgatcgccttccactttattaacccggactttct
gaaagcattctttgacctggctgaggatgaagaggatgatgaaggcatattgggcgaggtgtacatcaacccctacctcc
accagacccagaccctttcttctcagcctgatttcaaactgaccatcaagaacagctaaagcccaacttgacctgggact
tgcttgaagcggtctttcaaaagggacatggacggtgcaatgtcctggccaagccactgagaagtaatgttgcactgaac
tgacttcagatgtggcctttgggggccatcataggctttggtaggtcaacctcatgaatgcattgtttgggtctgaagaa
caatcatgaaacgcttctcttgaaggatctggtgtcaaggccagccaacccaggaaaggggtggtgtcagtaagagagat
ggtcctaatattagcaggaggggagtatgcacagcagatcccattgggataccactgaggacctctcctatcagtagaca
gagtgaggcaaatgctttgagcagcagatactggaagaggaaggagtaaaacatggatgtcatgtacggtgtgcagcctg
cccttggcttggtgcactcagaagccctggaagatgctatcctatcacaacagattctgatccaatcaccaaggggcttc
tgtagctggaggacatgtcctttgcatcaagcagcaaactacttgggctggtcctgttggatggagatccttcctcatgt
cacggacccaagatttctgccaactgaatatttattttatttgacttaggcactgcctgactccagctgactctgagcgg
ctttggagcatacaaccaacacatccataagcaataaaaaagcactccattttgtggttctacaaggatgcaactaggct
ccccaaataagggacataaggaggctagagtcacactaagagagagcagaaatgtttaatggaaggtagctatttcctct
ctaggaagctgtctccagccaaaggtctttgccaattggcttcacatggtttgaaggcaccatagatgtagaaaagaaaa
gacaatcttggcttgatctcatgccaaacaaagcaaaacaagtcatacctgtatatctgcagatcaccctagcctagatt
tgaggtttttcttttcggtatatggcttagcagatggagtgggggcaacatgcatgtggggaggggagtccctcccctct
ccttaggggctaagcattctggccacaaacagaagatctgcagttgaggggctgggcaaatattcatcgtgaagcattag
caaaacgtacttttggaggaatgttgaccacggtccctgttttgttctgttaaagtccttgtaggtgccttcaagcatta
tggcctggctcctaagggcctttcaagctacttatgggttaactacatacctccctggctgttgtagctattcttgtata
cttctgggctgagtgcagccctgctagggatcacttgggaagcagtaaaggtgccttagcctatttcttcagtgacctga
ttgtaactcttgttgtattttttgccatcagaatagtactgtagatgtattatttattaataaaattctggaaatgattc
atgtct

Protein
Protein IDhabu1_s889_g03228.t1
Definition-
>habu1_s889_g03228.t1
MTFFDGVYPFYPQSKKPFVFDVDLIIVIIVFLVIAFSFLLILPGIRGRARLYWLIRVISSLFIGGVIVAVHFSSDWETGT
VTANTSYKSFSSAMIHADIGLHVGLSGVNITLVGKPVDQLNETINYNEEFSWWFGTNYDKEFEEGLKRGLPSPIIYVAEK
FTDHSPCGLNNVYRMAGHYASATLWVAFCAWLVSNMLFSMPVPVYGGFMLLVTGAFLIFALLSFSTGRNAWCAIQFGLAS
LKLAYGASFWLTLATGLFCFLVGIVVIAFHFINPDFLKAFFDLAEDEEDDEGILGEVYINPYLHQTQTLSSQPDFKLTIK
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