Gene
| Gene Model ID | habu1_s889_g03230 |
|---|---|
| Locus | habu1_scaffold889 : 808086 ... 843599 : - |
| To GenomeBrowser | habu1_scaffold889:808086..843599 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorbitol dehydrogenase | EC:1.1.1.14 GO:0003939 GO:0005739 GO:0006013 GO:0006062 GO:0008270 GO:0016020 GO:0030317 GO:0031514 GO:0046370 GO:0051160 GO:0051287 GO:0055114 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03230.t1 | 1 | 1 | ADH_N | 98 | 209 | 5.8e-24 | 83.9 | 2.8e-27 | 1.0e-23 | 83.1 |
| habu1_s889_g03230.t1 | 1 | 1 | ADH_zinc_N | 249 | 378 | 3.0e-23 | 81.8 | 1.2e-26 | 4.5e-23 | 81.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03230.t1 | gi|602635756|ref|XP_007424740.1| | PREDICTED: sorbitol dehydrogenase [Python bivittatus] | 0.0 |
| habu1_s889_g03230.t1 | gi|637379484|ref|XP_008123514.1| | PREDICTED: sorbitol dehydrogenase-like [Anolis carolinensis] | 0.0 |
| habu1_s889_g03230.t1 | gi|564238976|ref|XP_006276345.1| | PREDICTED: sorbitol dehydrogenase [Alligator mississippiensis] | 0.0 |
| habu1_s889_g03230.t1 | gi|557270158|ref|XP_006020365.1| | PREDICTED: sorbitol dehydrogenase [Alligator sinensis] | 0.0 |
| habu1_s889_g03230.t1 | gi|514735348|ref|XP_005017288.1| | PREDICTED: sorbitol dehydrogenase [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 1.8 |
| Nose | 4.7 |
| Brain-1 | 1.2 |
| Eye | 1.2 |
| fetal fibroblast | 1.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 1.6 |
| Spleen | 0.9 |
| Lung | 2.1 |
| Liver | 42.3 |
| Kidney | 236.6 |
| Pancreas | 0.8 |
| Small intestine | 102.2 |
| Large intestine | 0.6 |
| Stomach | 1.1 |
| heart | 0.4 |
| ovary | 0.1 |
| cheek muscle | 4.1 |
Transcript
| Transcript ID | habu1_s889_g03230.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03230.t1 ggcgcgaggtgatcgccggttcctcggctcaggccagccgccagtcagaatctacgtcccgcgattgacatttcatggcc aaactaggtagcgtcatcagtgccctgatcattgtacacatcattggagcactgaagatgttacctaatttggtcatgaa atgtctgcaagaaaacctccaagttcagagatcaccaaagaccccacagtcgtcctcttctccactccgcaaacccctct ccctcctagcatggatactgttccccacatgggtcataaaatgtcttcaagaaaaccactatgctcaaagagcaccaaga cccatgttcaaccccaaggaaaaccgaccggttcctgaacctggtcctaatgaagtgcttttgaaaatgcactctgtggg aatctgtgggtctgatgtgcactactggcaacatggacgaattgggaattttgtggtgaagtctccaatggtgctggggc acgaagcttcaggaaccgttattaaagtagggtcttcggtgaccaagttaaagaaaggtgatcgagtagctattgagcct ggcgtccctcgagaaatagacgaattctgcaaaattggacgttacaatctatctccaacccttttcttctgtgcaacccc tcccgacgatgggaacctgtgccgatattacaagcacgatgccaacttttgctacaaacttccagataatgtcacctttg aggaaggagctcttgttgaacctctttcagttgcaattcatgcctgtagaagagccgaggtgaccctgggtagcaaagtc ttcatttgtggtgctggacccattgggctcgtgactttgctcattgctaaggcgatgggagccacgcaagtagtgattag cgatttgtcggctccccgacttgagaaagctacagaaattggggctgatttcaccatccaggtcaagggccagaaccctg aggagctggccagtatggtggaaagcttgttgggttgtatgcctgacattaccttggagtgcactggggcagaatcctgc atccagactggaatctatgccacccgttctggtgggactctggttctggtgggtctgggcccagaaatggtcaccttgcc cattgtgaatgcagcggtgcgtgaggtggacatccgtgggatatttagatactgcaatacgtggcccatggcgattgcga tgctcgcatcgaaaaaaataaacgtgcagcccctggtgactcaccgtttccctttggaaaaggcaacagaagcatttgag gcaaccaagaaagggatcgggataaaaatcatgctaaaatgtgaccctcatgaccagaatccctaaaaaaaaaaaggcat tgcattccattctgctttcctgttagggaggattaagtccatggagaagaaaatgtaaacaaagccaatcaaagccttaa acgtaatgtagagctttgtcaaggaaacaaatgttatgcaaattgtttggaaacttgactctcttgaacctaaacgtaga ccttgaagtcagatgaattaaatgacctctgccactagaagtga |
|
Protein
| Protein ID | habu1_s889_g03230.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03230.t1 MAKLGSVISALIIVHIIGALKMLPNLVMKCLQENLQVQRSPKTPQSSSSPLRKPLSLLAWILFPTWVIKCLQENHYAQRA PRPMFNPKENRPVPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGNFVVKSPMVLGHEASGTVIKVGSSVTKLKKGDRVAI EPGVPREIDEFCKIGRYNLSPTLFFCATPPDDGNLCRYYKHDANFCYKLPDNVTFEEGALVEPLSVAIHACRRAEVTLGS KVFICGAGPIGLVTLLIAKAMGATQVVISDLSAPRLEKATEIGADFTIQVKGQNPEELASMVESLLGCMPDITLECTGAE SCIQTGIYATRSGGTLVLVGLGPEMVTLPIVNAAVREVDIRGIFRYCNTWPMAIAMLASKKINVQPLVTHRFPLEKATEA FEATKKGIGIKIMLKCDPHDQNP |
|