Gene
| Gene Model ID | habu1_s889_g03233 |
|---|---|
| Locus | habu1_scaffold889 : 862610 ... 878302 : + |
| To GenomeBrowser | habu1_scaffold889:862610..878302 |
| Genes list of scaffold | habu1_scaffold889 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03233.t2 | 2 | 1 | PAT1 | 264 | 388 | 3.4e-31 | 108.3 | 5.2e-13 | 7.7e-09 | 34.3 |
| habu1_s889_g03233.t2 | 2 | 2 | PAT1 | 417 | 670 | 3.4e-31 | 108.3 | 3.7e-26 | 5.5e-22 | 77.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03233.t2 | gi|641757975|ref|XP_008165061.1| | PREDICTED: protein PAT1 homolog 2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.8 |
| Lung | 0.1 |
| Liver | 0.1 |
| Kidney | 0.1 |
| Pancreas | 0.1 |
| Small intestine | 2.1 |
| Large intestine | 0.8 |
| Stomach | 0.8 |
| heart | 0.1 |
| ovary | 69.5 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s889_g03233.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03233.t1 tgaggggggaaaaacagccccgaagttaaaaccaaagcaagcctgttgtgcgaatggatctagctacgtttcacctggtc cgactgcagatcctagaggattatttcatgatggaggaggacataagggaagaaactctgattgacaaagcaactgaaga ggatgaaattgatctctatattaatttaacattcacttcagatgttcgttctcttggtttgcaagcctaccctgaagaca ataaggcaaaggccttgacaacagaatctcagaaggtggctgtggttgaccccagggaaggggagatggtcgatattgaa ggaaaacaggagaccagaacttcagatgaggaaccgatggtagaagatggaaaagaagacgaaagtcttcccgaagagtc tcagcccccgtttgcttctggcaccatggaggccgaagaggaagccatgaccgaccatggagaggtgcctgcaagtaaga atgcaggagaactgcatgacttggaagatccagctgttatgagtgctgtacgaggtcagcgtttgctggagaaagaagat tctgctgttctcgatagcaaagtggccagccatttttcggaattttctcctggttacttgccccattcaaagtgtatgtg gaggactccaactctgaggaggagcccatcgttatctatgatgcagatgattgataacttggacctaaaagggaagggcc aggatgtcaggatatgcctctccacctcccttccaaccattgttttccaacgccagcagcccaacatgggctttgatgca tccccccgaaacgccacccttcagcccgctgagcggcagccagcagaagatcagcttgcccagcgcaatgacccagttgc atcccttacatcagcgatttctgactcaaaggcagcgagggcaaaaagcgagacgccagaagtggatcctttctctgctc tcatgattccgtttgaaaaagattgggtgatcaaggtacagatgttacagttgcagagtgaaaacccccagcgggatgac tattattaccaggaatattatcgcaagctggagcacaaacaggctgagaaaggactcctgacagggagtaaacctgaggt ccctaagctagtcaccccatatatccaaagagtggagacctacgaatctgtagtgcggattccaggctccttgggacagg tagccatgtccacctgctacagtccccgcagggctatcgatgctgtgtaccatttctctctggaacaggtggtagggaat cagcggctacaagtgctataccagattgagaaaatgtaccttatactcctggagatggaggacattcaacggaaactgga ccaggccccagaagaaatgcatccccagttatacgagaaacttgtccgtgtagtagaacgggtctaccaagcactgagaa ttgaggagcattctggtgaagaagaggtgaaagaggagtttctacagcttctgctggtaggaaaagggaagcggttggtg gcccgtctgctgccacatctgtccctggagagagccaagatgacccttgtcaatattgtgcaacacctagcagtgctcat caagaaggacctgttggaggaggtaccttctcgccctagttctcctttggccattatccagatatttggaaatccttgca cggggaccctctctgtcctctacactcctctctgtgacaccattggacagttgacatttacagagttgatggatgtcctc caggaactcacccagctgcagcccgattctgtcaaacagtccctcgctttggtcttcagcaataagtttgccatctcgct gctgtacctgctcttgagccacggtgagaggtggctctcttcggattcatccccaaagcctgatactaaagacttggaaa aatgggtggacttggtgcttcttgttgcaagagagctgtctcaagttcccaaaacttccatggtggaaccccttcacctt cccagcaaccttctcttcctcttctgtcgctacgtggacaaagacattgtgaaccgcttggatgtccagatggactgagg attatccatggttaagggaatgtattgtgtgaaggcaagtatatctgcaagggttcgacatgtatggcagggcaactcta gatgaaagctgtagagtctttataggccagtcacttgacaagatgtgagggacttctctggtaattgcatgcctcctttc agctctctctggtctttgatcggccatgtaacctccaggtcttgctgaactacaactcccagcattcttagcaagtatgg ccaagagtgacggattctaggcatggtagttcaataacatctggaggtccaacaggtccacatcttcacctctttcataa caggggacatgtgaactcattgctcttttagaaattggggaag |
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| Transcript ID | habu1_s889_g03233.t2 |
| Definition | - |
>habu1_s889_g03233.t2 tgaggggggaaaaacagccccgaagttaaaaccaaagcaagcctgttgtgcgaatggatctagctacgtttcacctggtc cgactgcagatcctagaggattatttcatgatggaggaggacataagggaagaaactctgattgacaaagcaactgaaga ggatgaaattgatctctatattaatttaacattcacttcagatgttcgttctcttggtttgcaagcctaccctgaagaca ataaggcaaaggccttgacaacagaatctcagaaggtggctgtggttgaccccagggaaggggagatggtcgatattgaa ggaaaacaggagaccagaacttcagatgaggaaccgatggtagaagatggaaaagaagacgaaagtcttcccgaagagtc tcagcccccgtttgcttctggcaccatggaggccgaagaggaagccatgaccgaccatggagaggtgcctgcaagtaaga atgcaggagaactgcatgacttggaagatccagctgttatgagtgctgtacgaggtcagcgtttgctggagaaagaagat tctgctgttctcgatagcaaagtggccagccatttttcggaattttctcctggttacttgccccattcaaagtgtatgtg gaggactccaactctgaggaggagcccatcgttatctatgatgcaggctctagaaagggtgtctcggtcccgtgccaatc tagacttcctaacttcaccggtgcggaccagcttcctcgattcccctgacgtggactgctcggctttctgcgggaggact ctgagtcccactccccagcgtttcatgcgtcaaatgtcaggatatgcctctccacctcccttccaaccattgttttccaa cgccagcagcccaacatgggctttgatgcatccccccgaaacgccacccttcagcccgctgagcggcagccagcagaaga tcagcttgcccagcgcaatgacccagttgcatcccttacatcagcgatttctgactcaaaggcagcgagggcaaaaagcg agacttccctgcgtggactctcagacgccagaagtggatcctttctctgctctcatgattccgtttgaaaaagattgggt gatcaaggtacagatgttacagttgcagagtgaaaacccccagcgggatgactattattaccaggaatattatcgcaagc tggagcacaaacaggctgagaaaggactcctgacagggagtaaacctgaggtccctaagctagtcaccccatatatccaa agagtggagacctacgaatctgtagtgcggattccaggctccttgggacaggtagccatgtccacctgctacagtccccg cagggctatcgatgctgtgtaccatttctctctggaacaggtggtagggaatcagcggctacaagtgctataccagattg agaaaatgtaccttatactcctggagatggaggacattcaacggaaactggaccaggccccagaagaaatgcatccccag ttatacgagaaacttgtccgtgtagtagaacgggtctaccaagcactgagaattgaggagcattctggtgaagaagaggt gaaagaggagtttctacagcttctgctggtaggaaaagggaagcggttggtggcccgtctgctgccacatctgtccctgg agagagccaagatgacccttgtcaatattgtgcaacacctagcagtgctcatcaagaaggacctgttggaggaggtacct tctcgccctagttctcctttggccattatccagatatttggaaatccttgcacggggaccctctctgtcctctacactcc tctctgtgacaccattggacagttgacatttacagagttgatggatgtcctccaggaactcacccagctgcagcccgatt ctgtcaaacagtccctcgctttggtcttcagcaataagtttgccatctcgctgctgtacctgctcttgagccacggtgag aggtggctctcttcggattcatccccaaagcctgatactaaagacttggaaaaatgggtggacttggtgcttcttgttgc aagagagctgtctcaagttcccaaaacttccatggtggaaccccttcaccttcccagcaaccttctcttcctcttctgtc gctacgtggacaaagacattgtgaaccgcttggatgtccagatggactgaggattatccatggttaagggaatgtattgt gtgaaggcaagtatatctgcaagggttcgacatgtatggcagggcaactctagatgaaagctgtagagtctttataggcc agtcacttgacaagatgtgagggacttctctggtaattgcatgcctcctttcagctctctctggtctttgatcggccatg taacctccaggtcttgctgaactacaactcccagcattcttagcaagtatggccaagagtgacggattctaggcatggta gttcaataacatctggaggtccaacaggtccacatcttcacctctttcataacaggggacatgtgaactcattgctcttt tagaaattggggaag |
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Protein
| Protein ID | habu1_s889_g03233.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03233.t1 MDLATFHLVRLQILEDYFMMEEDIREETLIDKATEEDEIDLYINLTFTSDVRSLGLQAYPEDNKAKALTTESQKVAVVDP REGEMVDIEGKQETRTSDEEPMVEDGKEDESLPEESQPPFASGTMEAEEEAMTDHGEVPASKNAGELHDLEDPAVMSAVR GQRLLEKEDSAVLDSKVASHFSEFSPGYLPHSKCMWRTPTLRRSPSLSMMQMIDNLDLKGKGQDVRICLSTSLPTIVFQR QQPNMGFDASPRNATLQPAERQPAEDQLAQRNDPVASLTSAISDSKAARAKSETPEVDPFSALMIPFEKDWVIKVQMLQL QSENPQRDDYYYQEYYRKLEHKQAEKGLLTGSKPEVPKLVTPYIQRVETYESVVRIPGSLGQVAMSTCYSPRRAIDAVYH FSLEQVVGNQRLQVLYQIEKMYLILLEMEDIQRKLDQAPEEMHPQLYEKLVRVVERVYQALRIEEHSGEEEVKEEFLQLL LVGKGKRLVARLLPHLSLERAKMTLVNIVQHLAVLIKKDLLEEVPSRPSSPLAIIQIFGNPCTGTLSVLYTPLCDTIGQL TFTELMDVLQELTQLQPDSVKQSLALVFSNKFAISLLYLLLSHGERWLSSDSSPKPDTKDLEKWVDLVLLVARELSQVPK TSMVEPLHLPSNLLFLFCRYVDKDIVNRLDVQMD |
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| Protein ID | habu1_s889_g03233.t2 |
| Definition | - |
>habu1_s889_g03233.t2 MDLATFHLVRLQILEDYFMMEEDIREETLIDKATEEDEIDLYINLTFTSDVRSLGLQAYPEDNKAKALTTESQKVAVVDP REGEMVDIEGKQETRTSDEEPMVEDGKEDESLPEESQPPFASGTMEAEEEAMTDHGEVPASKNAGELHDLEDPAVMSAVR GQRLLEKEDSAVLDSKVASHFSEFSPGYLPHSKCMWRTPTLRRSPSLSMMQALERVSRSRANLDFLTSPVRTSFLDSPDV DCSAFCGRTLSPTPQRFMRQMSGYASPPPFQPLFSNASSPTWALMHPPETPPFSPLSGSQQKISLPSAMTQLHPLHQRFL TQRQRGQKARLPCVDSQTPEVDPFSALMIPFEKDWVIKVQMLQLQSENPQRDDYYYQEYYRKLEHKQAEKGLLTGSKPEV PKLVTPYIQRVETYESVVRIPGSLGQVAMSTCYSPRRAIDAVYHFSLEQVVGNQRLQVLYQIEKMYLILLEMEDIQRKLD QAPEEMHPQLYEKLVRVVERVYQALRIEEHSGEEEVKEEFLQLLLVGKGKRLVARLLPHLSLERAKMTLVNIVQHLAVLI KKDLLEEVPSRPSSPLAIIQIFGNPCTGTLSVLYTPLCDTIGQLTFTELMDVLQELTQLQPDSVKQSLALVFSNKFAISL LYLLLSHGERWLSSDSSPKPDTKDLEKWVDLVLLVARELSQVPKTSMVEPLHLPSNLLFLFCRYVDKDIVNRLDVQMD |
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