Gene
| Gene Model ID | habu1_s889_g03234 |
|---|---|
| Locus | habu1_scaffold889 : 885950 ... 920522 : + |
| To GenomeBrowser | habu1_scaffold889:885950..920522 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-1 | GO:0005102 GO:0005737 GO:0007165 GO:0012505 GO:0016020 GO:0043231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03234.t2 | 1 | 1 | Sorting_nexin | 9 | 125 | 1.7e-15 | 57.2 | 8.2e-19 | 3.1e-15 | 56.4 |
| habu1_s889_g03234.t2 | 2 | 1 | PX | 131 | 254 | 7.7e-35 | 119.0 | 9.2e-25 | 3.4e-21 | 75.1 |
| habu1_s889_g03234.t2 | 1 | 1 | Vps5 | 257 | 336 | 5.5e-22 | 78.1 | 3.1e-25 | 1.2e-21 | 77.1 |
| habu1_s889_g03234.t2 | 2 | 2 | PX | 331 | 411 | 7.7e-35 | 119.0 | 4.1e-15 | 1.5e-11 | 44.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03234.t2 | gi|602640030|ref|XP_007426832.1| | PREDICTED: sorting nexin-22 [Python bivittatus] | 0.0 |
| habu1_s889_g03234.t2 | gi|74000462|ref|XP_535509.2| | PREDICTED: sorting nexin-1 isoformX1 [Canis lupus familiaris] | 0.0 |
| habu1_s889_g03234.t2 | gi|291402880|ref|XP_002718200.1| | PREDICTED: sorting nexin-1 [Oryctolagus cuniculus] | 0.0 |
| habu1_s889_g03234.t2 | gi|395822302|ref|XP_003784459.1| | PREDICTED: sorting nexin-1 [Otolemur garnettii] | 0.0 |
| habu1_s889_g03234.t2 | gi|478494768|ref|XP_004421732.1| | PREDICTED: sorting nexin-1 isoform 1 [Ceratotherium simum simum] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.4 |
| Venom grand-1 | 9.2 |
| Pit, infrared sensing | 5.1 |
| Nose | 9.2 |
| Brain-1 | 3.0 |
| Eye | 10.7 |
| fetal fibroblast | 21.2 |
| venom gland-2 | 18.3 |
| Brain-2 | 6.7 |
| Spleen | 19.0 |
| Lung | 12.6 |
| Liver | 15.3 |
| Kidney | 24.8 |
| Pancreas | 7.1 |
| Small intestine | 18.6 |
| Large intestine | 24.5 |
| Stomach | 9.3 |
| heart | 6.1 |
| ovary | 46.7 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s889_g03234.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03234.t1 gcctccccgcctggccccgccccctcggccataaatcacctgttgcggcttccggccgggcagcgagaggggagccggaa gtggctgcctgggcggcgagatggcgtccggaggctccccggtggaccggctgcccccgcccttcccggcggaggcggag gcggccgaggcgagtcctggcgacccccaaccggacagcgatttggacggggaggacattttcaccggcaacgccagtaa gccagaatccccaaagaaggaatccccggtgccactggaaaacaatttgaaagcaaatggcatccaggaagaacaggaag atccagatctatttgcagatgccactgttgaattgtccctggataatagccaaaaccagccaaagaaggagacgacaaca gtgttcagtcctgccccctctctagaaaaaccaagccattcgtcttctaagcagcagtcaaaaacctgtgaggagttgga agaggaagagcaggaagaccaatttgaactttccgtgggagtgagtgatccagagaaaattggagatggaatgaatgcct atgttgcttacaaagtgtccacacagaccactctgccaatgttcaggaaccagcagttctctgtgaagaggcgattcagt gactttttgggcttatatgagaagctgttggagaaacacgcacagctcggaatcatcgttcctcctcctccggagaagag cttaataggagggtcgtgtaccacctgccaggtgccaatgtaccacaggtggtacccgtaccactggttgaaaagccctg aacttgaggacccagatgacaccagaatgaccaaactcaaagttggaaaagaagattcttcctccacagaattcttggag aaaagaagagctgccttagaaagatatattcaaagaaccgtaagccaccccaccatgctgcaggacccagacgtccggga attcttggaaaaagatgaggcggcctttgaccagagaatgaagtcttggcagcgctggcaagatgcccaggtcacgctgc agaagaaacgggaaactgaggccaggcttctgtgggccaacaaacccgacaaacttcagcaagctaaagaggagatctca gagtgggaatctcgcgtgacccagtacgagcgggagtttgaacggctctctgctgtcctccggaaagaggtcttacggtt tgaggtattcaaagtggagatcgtgtgtaacggaaggaagcattgcgtggagaagcgctacagcgagttttacgcacttc ataaaaggatcaaggggagctgccaggttcccgacttcccacccaaacgggtcccgaactggatggtgaaggttctgcag caacggagagcgggattagaagcttatctgcagggcgtcatcttgcagaaccaaacacttcccaaggaactgcttcattt cttgaagctctggcaaggcctgcaggagccccatttggcatgggatgagaactcttcctttcaggacttcagcccctgtg cccagctctctcaccggcctggcataagcttccacagcgatccgtacgtgctcccatcttccacggatctgcttccgaat ataatcctaagcggtgtcctgcaggccctctacgcccaagaccatcacctgcctggaagcaaagctcttaacggactcgg ggctgcaaaggacaatgacagagacgcattgagttggtgttctcctttccttcctgcctagagagacatggggctgcctg ctttgcaagtttgtcccttggaagggaagacacccccttgccccccccagcttctcttgtgtgaaaaacggagggatcaa ggacacagcttaccgaacatcttcctccgtttcaccaggggaagggggaaaaaaaatccatagtagtagatcctagactt gttgagtaggctatccattaaaatgcactgtggtttatttcggc |
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| Transcript ID | habu1_s889_g03234.t2 |
| Definition | - |
>habu1_s889_g03234.t2 gcctccccgcctggccccgccccctcggccataaatcacctgttgcggcttccggccgggcagcgagaggggagccggaa gtggctgcctgggcggcgagatggcgtccggaggctccccggtggaccggctgcccccgcccttcccggcggaggcggag gcggccgaggcgagtcctggcgacccccaaccggacagcgatttggacggggaggacattttcaccggcaacgccagtaa gccagaatccccaaagaaggaatccccggtgccactggaaaacaatttgaaagcaaatggcatccaggaagaacaggaag atccagatctatttgcagatgccactgttgaattgtccctggataatagccaaaaccagccaaagaaggagacgacaaca gtgttcagtcctgccccctctctagaaaaaccaagccattcgtcttctaagcagcagtcaaaaacctgtgaggagaccac tctgccaatgttcaggaaccagcagttctctgtgaagaggcgattcagtgactttttgggcttatatgagaagctgttgg agaaacacgcacagctcggaatcatcgttcctcctcctccggagaagagcttaataggagggtcgtgtaccacctgccag gtgccaatgtaccacaggtggtacccgtaccactggttgaaaagccctgaacttgaggacccagatgacaccagaatgac caaactcaaagttggaaaagaagattcttcctccacagaattcttggagaaaagaagagctgccttagaaagatatattc aaagaaccgtaagccaccccaccatgctgcaggacccagacgtccgggaattcttggaaaaagatgaggcggcctttgac cagagaatgaagtcttggcagcgctggcaagatgcccaggtcacgctgcagaagaaacgggaaactgaggccaggcttct gtgggccaacaaacccgacaaacttcagcaagctaaagaggagatctcagagtgggaatctcgcgtgacccagtacgagc gggagtttgaacggctctctgctgtcctccggaaagaggtcttacggtttgaggtattcaaagtggagatcgtgtgtaac ggaaggaagcattgcgtggagaagcgctacagcgagttttacgcacttcataaaaggatcaaggggagctgccaggttcc cgacttcccacccaaacgggtcccgaactggatggtgaaggttctgcagcaacggagagcgggattagaagcttatctgc agggcgtcatcttgcagaaccaaacacttcccaaggaactgcttcatttcttgaagctctggcaaggcctgcaggagccc catttggcatgggatgagaactcttcctttcaggacttcagcccctgtgcccagctctctcaccggcctggcataagctt ccacagcgatccgtacgtgctcccatcttccacggatctgcttccgaatataatcctaagcggtgtcctgcaggccctct acgcccaagaccatcacctgcctggaagcaaagctcttaacggactcggggctgcaaaggacaatgacagagacgcattg agttggtgttctcctttccttcctgcctagagagacatggggctgcctgctttgcaagtttgtcccttggaagggaagac acccccttgccccccccagcttctcttgtgtgaaaaacggagggatcaaggacacagcttaccgaacatcttcctccgtt tcaccaggggaagggggaaaaaaaatccatagtagtagatcctagacttgttgagtaggctatccattaaaatgcactgt ggtttatttcggc |
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Protein
| Protein ID | habu1_s889_g03234.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03234.t1 MASGGSPVDRLPPPFPAEAEAAEASPGDPQPDSDLDGEDIFTGNASKPESPKKESPVPLENNLKANGIQEEQEDPDLFAD ATVELSLDNSQNQPKKETTTVFSPAPSLEKPSHSSSKQQSKTCEELEEEEQEDQFELSVGVSDPEKIGDGMNAYVAYKVS TQTTLPMFRNQQFSVKRRFSDFLGLYEKLLEKHAQLGIIVPPPPEKSLIGGSCTTCQVPMYHRWYPYHWLKSPELEDPDD TRMTKLKVGKEDSSSTEFLEKRRAALERYIQRTVSHPTMLQDPDVREFLEKDEAAFDQRMKSWQRWQDAQVTLQKKRETE ARLLWANKPDKLQQAKEEISEWESRVTQYEREFERLSAVLRKEVLRFEVFKVEIVCNGRKHCVEKRYSEFYALHKRIKGS CQVPDFPPKRVPNWMVKVLQQRRAGLEAYLQGVILQNQTLPKELLHFLKLWQGLQEPHLAWDENSSFQDFSPCAQLSHRP GISFHSDPYVLPSSTDLLPNIILSGVLQALYAQDHHLPGSKALNGLGAAKDNDRDALSWCSPFLPA |
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| Protein ID | habu1_s889_g03234.t2 |
| Definition | - |
>habu1_s889_g03234.t2 MASGGSPVDRLPPPFPAEAEAAEASPGDPQPDSDLDGEDIFTGNASKPESPKKESPVPLENNLKANGIQEEQEDPDLFAD ATVELSLDNSQNQPKKETTTVFSPAPSLEKPSHSSSKQQSKTCEETTLPMFRNQQFSVKRRFSDFLGLYEKLLEKHAQLG IIVPPPPEKSLIGGSCTTCQVPMYHRWYPYHWLKSPELEDPDDTRMTKLKVGKEDSSSTEFLEKRRAALERYIQRTVSHP TMLQDPDVREFLEKDEAAFDQRMKSWQRWQDAQVTLQKKRETEARLLWANKPDKLQQAKEEISEWESRVTQYEREFERLS AVLRKEVLRFEVFKVEIVCNGRKHCVEKRYSEFYALHKRIKGSCQVPDFPPKRVPNWMVKVLQQRRAGLEAYLQGVILQN QTLPKELLHFLKLWQGLQEPHLAWDENSSFQDFSPCAQLSHRPGISFHSDPYVLPSSTDLLPNIILSGVLQALYAQDHHL PGSKALNGLGAAKDNDRDALSWCSPFLPA |
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