Gene
| Gene Model ID | habu1_s889_g03238 |
|---|---|
| Locus | habu1_scaffold889 : 973812 ... 1009434 : + |
| To GenomeBrowser | habu1_scaffold889:973812..1009434 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating signal cointegrator 1 isoform x2 | GO:0005634 GO:0006355 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03238.t1 | 1 | 1 | zf-C2HC5 | 170 | 219 | 3.9e-18 | 64.9 | 1.6e-21 | 7.7e-18 | 63.9 |
| habu1_s889_g03238.t1 | 1 | 1 | ASCH | 350 | 445 | 2.4e-09 | 37.5 | 1.6e-12 | 8.0e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03238.t1 | gi|602640022|ref|XP_007426828.1| | PREDICTED: activating signal cointegrator 1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s889_g03238.t1 | gi|602640020|ref|XP_007426827.1| | PREDICTED: activating signal cointegrator 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s889_g03238.t1 | gi|671032053|ref|XP_008706828.1| | PREDICTED: activating signal cointegrator 1 isoform X4 [Ursus maritimus] | 0.0 |
| habu1_s889_g03238.t1 | gi|752385492|ref|XP_011216763.1| | PREDICTED: activating signal cointegrator 1 isoform X3 [Ailuropoda melanoleuca] | 0.0 |
| habu1_s889_g03238.t1 | gi|327285624|ref|XP_003227533.1| | PREDICTED: activating signal cointegrator 1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.3 |
| Venom grand-1 | 6.5 |
| Pit, infrared sensing | 4.0 |
| Nose | 4.3 |
| Brain-1 | 2.2 |
| Eye | 4.1 |
| fetal fibroblast | 10.0 |
| venom gland-2 | 9.6 |
| Brain-2 | 2.6 |
| Spleen | 5.0 |
| Lung | 10.9 |
| Liver | 7.6 |
| Kidney | 13.0 |
| Pancreas | 8.1 |
| Small intestine | 6.4 |
| Large intestine | 5.2 |
| Stomach | 8.3 |
| heart | 6.9 |
| ovary | 34.9 |
| cheek muscle | 14.2 |
Transcript
| Transcript ID | habu1_s889_g03238.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03238.t1 tttcgtgtctttgtgtgtgcacccgctttcttcttcccccgtcatgaaggcgtctctgtcagaagcggagatggcggcgg cagcggcggcggccctcgtgtcgtggtgcatggggcagctgcgcggcacttttgggctggatgtcagcgaggagattatc caatatattttatctatcgaggatgaggaagaaattcgggagtatgtcgccgacttgatccaagggagagatggccagaa gaagttcttcatagatgagcttgtagcaaggtggaaacagtccctttctacaactttggatcctttgccgctgtatcaga aaaaagatgatattttggatacacctcggccaggagaccagacaaagagaggaaggcataaagggagaaataaacaggaa gcacccatttatgttgaagcctgtcagcctgtagagaaagtaaaaacaccgcttgatttagccaaggcccaggagatccc cagaggcagcagctcctcttcctccaagaagaaggcaaaatacgttaatttgtacacgaaggaaggcgaggacaagctgg ctgtcatgctcccagggcgccattcctgtgaatgcttggcccagaagcacaagctcatcaacaactgtttgacgtgcggg cggatcgtttgtgaacaagaggggtctgggccttgcctattctgtggaactctggtgtgcaccaaagaagagcaggatgt cttgcagcgggattccaataagagtcaaaagctgttaaagaaactgttgggaggtgcagaaaatattggaaaggtggaca taaatgacaaagacgtgttccaacttcgggaagctcgacttaagtcaggtctggagatggccgtgaagcacaaagacaaa ctgctggagtatgacaaaaccagtgtgcgacgaactcaggtaattgacgacgagtctgattactttgctaccgactccaa ccagtggctgtccaagcaggagaggcaggtgctggagaagagagcgaaggagctgtacgagctgcggcacgcctcgcggc tgtccaggaaggtcaccatcgactttgcgggtcggcaggtccgcgaagaaaatgacaacatggcggactatcacagcaag gtggaaggccgaatttggtacacatcccacagaggccggctatggatagcagccacggcaaaaagacctaccccccagga aatctctgagctggaggccacctacagaacattgctccaggaagatttggaatttccccaggattatccctccggctgtc tgctcggctgcgtggacttgattgactgcctgtcacaagagcaatttcaggaacagcgagaggctaatagattaaacaca tccctgaaagagtgtcagatcggagccgctcaacatcttgacaatcagcaggcagtttatgttagagaaattggatggcc gatcaagccaactggctgtgtcctgcttctcaagcaaagggtactctgatgcttggaagcctgtaatgattatccccagc tgagccaggagtcggcttctccatttgtcttcatctgttctaacccccaggagatggtgattaagtttcccatcaagggc aaacataaaatctggaagctggattccaagattcaccagggagccaagaaagggttaatgaagcagaaagtagccatctg agttcccaaatcctcctcctcctcctctactacagtccccaccctactctcctggaccccagagaagaacaggagcagag gccccaggagggctgatgaggaagccccttaggaactgaaggcttcgaagcagaagaaaacaaagaaggaaattgctgtt atcttgcatcattataatcgcagccaaaaaagaaaaagaaaaatgcgctgaattgtttgtgaccaaag |
|
Protein
| Protein ID | habu1_s889_g03238.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03238.t1 MAAAAAAALVSWCMGQLRGTFGLDVSEEIIQYILSIEDEEEIREYVADLIQGRDGQKKFFIDELVARWKQSLSTTLDPLP LYQKKDDILDTPRPGDQTKRGRHKGRNKQEAPIYVEACQPVEKVKTPLDLAKAQEIPRGSSSSSSKKKAKYVNLYTKEGE DKLAVMLPGRHSCECLAQKHKLINNCLTCGRIVCEQEGSGPCLFCGTLVCTKEEQDVLQRDSNKSQKLLKKLLGGAENIG KVDINDKDVFQLREARLKSGLEMAVKHKDKLLEYDKTSVRRTQVIDDESDYFATDSNQWLSKQERQVLEKRAKELYELRH ASRLSRKVTIDFAGRQVREENDNMADYHSKVEGRIWYTSHRGRLWIAATAKRPTPQEISELEATYRTLLQEDLEFPQDYP SGCLLGCVDLIDCLSQEQFQEQREANRLNTSLKECQIGAAQHLDNQQAVYVREIGWPIKPTGCVLLLKQRVL |
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