Gene
| Gene Model ID | habu1_s889_g03241 |
|---|---|
| Locus | habu1_scaffold889 : 1091026 ... 1112951 : - |
| To GenomeBrowser | habu1_scaffold889:1091026..1112951 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ornithine decarboxylase antizyme isoform partial | GO:0005515 GO:0005634 GO:0005829 GO:0006521 GO:0006596 GO:0008073 GO:0019467 GO:0043086 GO:0045732 GO:0090316 GO:1902268 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03241.t1 | 1 | 1 | ODC_AZ | 122 | 217 | 2.9e-28 | 97.5 | 2.8e-32 | 4.1e-28 | 97.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03241.t1 | gi|602640014|ref|XP_007426824.1| | PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2 [Python bivittatus] | 0.0 |
| habu1_s889_g03241.t1 | gi|631226402|ref|NP_001278824.1| | ornithine decarboxylase antizyme 2 [Anolis carolinensis] | 0.0 |
| habu1_s889_g03241.t1 | gi|119598096|gb|EAW77690.1| | ornithine decarboxylase antizyme 2, isoform CRA_a, partial [Homo sapiens] | 0.0 |
| habu1_s889_g03241.t1 | gi|698382509|ref|XP_009807239.1| | PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2, partial [Gavia stellata] | 0.0 |
| habu1_s889_g03241.t1 | gi|675604024|ref|XP_008936822.1| | PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2-like, partial [Merops nubicus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.1 |
| Venom grand-1 | 16.8 |
| Pit, infrared sensing | 15.4 |
| Nose | 24.4 |
| Brain-1 | 12.2 |
| Eye | 21.3 |
| fetal fibroblast | 22.1 |
| venom gland-2 | 15.7 |
| Brain-2 | 13.8 |
| Spleen | 18.5 |
| Lung | 38.5 |
| Liver | 22.4 |
| Kidney | 17.5 |
| Pancreas | 13.1 |
| Small intestine | 21.2 |
| Large intestine | 39.1 |
| Stomach | 31.1 |
| heart | 28.7 |
| ovary | 43.3 |
| cheek muscle | 26.3 |
Transcript
| Transcript ID | habu1_s889_g03241.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03241.t1 tccggcttatctcagcttgctgcctccgtcctgcccacctgcctccactttctgcaacctggatgctttccagagaggtg ccttcatttcccagaatgctcagcgattctcaggcgtatgtttctcttccggcctgccggctccaaaacttttccccctg taaagcctggcagggtcgtccccgggatgtggtccaaataccccatcaagatgcgctacaaccttgatgagaaagtgatt ttgcaaccaattctgggactttcgcagaattccaagcctgagcacaaaggcacattgttccagggcctctgtggtgctcc tgatgcccctcacccactgacgaagatccccggtgggcgagggggtggcagggatccttctctttcacctttgatatata aggatgagaagctcactgttaaccaagatcttccggtgcatgatgggaaaccacatattgtccacttccagtacaaagtt acggaagtgaagatctcctcctgggatgcagtgctatccaatcagagtctttttgtggaaattcctgatggcttattagc tgatgggagcaaagaaggattattagcgctgttagaatttgctgaagagaaaatgaaagcaagttatgtcttcatttgct ttcgaaaaagcagagaagacagagctccgttactgaagacattcagttttctgggttttgaaattgtgaggcctggtcat ccttgtgtcccatcgcggccagatgtgttgttcatggtgtaccccctggatcaggtctcttctgatgatgatgacgacga tgacgacgattagaactagtgcagcgtttcagtggggcccggacatgcttcgagcacgggagggggctccaatgcctcta cagaggaaagggaaaacaaaatccttctggactgaaactgcatttcttattgttagagtgacctgtatatcttctgagtt gacttttccattgaaatgtgttacctagcgaataatataaagtctgcacatgtaattgcacaatagtaaatggaagattt ctagcctatataaaagaaatgtggctctttaaattcaagcttcataatgtccccattttttttttgcttctatgtgttac aagaacaaggagttcctgtcatccatctttgagttagcagaaagatctaaatcaaatttaaagacatttctaccgaatcc aggaaatatcagtccaataaaattcagtctttgatcaagggct |
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Protein
| Protein ID | habu1_s889_g03241.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03241.t1 MFLFRPAGSKTFPPVKPGRVVPGMWSKYPIKMRYNLDEKVILQPILGLSQNSKPEHKGTLFQGLCGAPDAPHPLTKIPGG RGGGRDPSLSPLIYKDEKLTVNQDLPVHDGKPHIVHFQYKVTEVKISSWDAVLSNQSLFVEIPDGLLADGSKEGLLALLE FAEEKMKASYVFICFRKSREDRAPLLKTFSFLGFEIVRPGHPCVPSRPDVLFMVYPLDQVSSDDDDDDDDD |
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