Gene
| Gene Model ID | habu1_s889_g03246 |
|---|---|
| Locus | habu1_scaffold889 : 1194687 ... 1228981 : - |
| To GenomeBrowser | habu1_scaffold889:1194687..1228981 |
| Genes list of scaffold | habu1_scaffold889 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03246.t3 | 2 | 1 | RRM_1 | 312 | 374 | 1.1e-10 | 41.0 | 1.2e-08 | 4.3e-05 | 23.0 |
| habu1_s889_g03246.t3 | 1 | 1 | RRM_6 | 312 | 374 | 4.5e-06 | 26.5 | 4.1e-09 | 1.5e-05 | 24.8 |
| habu1_s889_g03246.t3 | 2 | 2 | RRM_1 | 426 | 484 | 1.1e-10 | 41.0 | 2.5e-06 | 0.0094 | 15.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.3 |
| Nose | 12.4 |
| Brain-1 | 6.3 |
| Eye | 2.6 |
| fetal fibroblast | 0.9 |
| venom gland-2 | 1.4 |
| Brain-2 | 6.1 |
| Spleen | 0.8 |
| Lung | 1.5 |
| Liver | 0.2 |
| Kidney | 0.0 |
| Pancreas | 3.1 |
| Small intestine | 0.1 |
| Large intestine | 0.9 |
| Stomach | 3.2 |
| heart | 0.4 |
| ovary | 226.9 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s889_g03246.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03246.t1 gcgggatttccgaagcatcgactcgacatggctttcccgcccccgaaggaaggtgttggcagaatcaccaaggattgctg gaacaattctgatgttccagctctcactacgtgcagcaacgctgatatttttcggcgaataaacgccatgcttgataata ctcttgacttcagtggggtctgcacaacgcccatcacaaaggaaaggagggagctactgccaggtgacttaatgaagttt ccagactccgagggaacaggggccgcaagcaggatgctcttccccgcttctgtccaggagtctccgcgtggtctgcccga cgccagcgacctgtgccttggattgcagtctctcagcctgccagggtgggataggccgtggagcacccaggatacagatg ctgcagcccagccaagcacgcagtctgttctcaacatgctcagccatcctttcgggaagccgtccttgggcttcctgcct ctcgatcccatcggctcagagctgagtgagaatcttccaactccaaccttgagggcctcccgcttggagagcagtcgttc ccttctgtattcgcgttccagcagtccctccgactccgacactagtggattcagctctggatccgaccatctttcagatc tgatctcgagtctccgtatctcacctcctctgccattcctgcctatcggaggcctcaccagagatcccttgaatggagca gggtctcacctggatcaagagcaggctgccttggctgccgtcacctcctccaccccagccgccttgtccaagcagtggcc tggggcctcttcctggtcatcctggaacatcacggactctccagaagatctcttcagcatagaaagagaagccagactcc acaagcaagccgcagctgtgaacgaggcaacctgcacttggagtgggcagctgccacctcggaactacaaaaatcccgtt tactcctgcaaggtgtttttaggaggtgttccctgggacatcacagaagcgggtctgatcagcaccttccgtgtgtttgg ctcgctgagagtggagtggcctggtaaggatagcaagcatccccgctgccctcccaaaggttatgcctacctggtgtttg aatctgagaagtctgtgcgtgccttgctccaaaactgctcccgggatctgctgagccccagtggcctgagcgagtattac ttcaagatgtctagccgtagaatgagatgcaaggaggtgcaggtgatcccatgggtcttggcagatagcaactttgtgcg cagcccaactcagagactggaccctgggaaaacggtcttcgtgggagcccttcacgggatgctgaatgcagaggccttgg caggaatcctcaacgacctgtttgggggagttgtgtatgcaggtattgacacagacaagcacaagtatcccattggatct ggccgtgttacctttaacaaccagcgtagctatctgaaagcagtcagtgctgcatttgtggagatcaaaacaacaaagtt tacaaaaaaggttcagattgatccgtatctggaagatgccatgtgtcaagtttgcaggtctcagccgggtccgttcttct gtagagatcagatgtgcttcaagtacttctgtcgctcttgctggcactggaaacattccatggagatcctacaccaccac cgtccattgatgcgtaaccagaagaatcgcgacgccagctagagctgtttgccgggccaagctcttccgttgactatagg gaagagaagcccaccgatcctagttggtgccatacccaggctgggggagatgcccgtctgaaggactaacggggaacctt gccttcacgtttgcacttgctggtctttctttgtttctgcactaatgcacagtgaagtttttttttttggtcgggggttt gtttggggatttttgagaggggagggcccctcgaaacaattctgcagttcccagactttggttccttggttgctgacgag aagcatcaagagatcataggttgagaaggtattgaatgcagatgccttcaaatttcttatttatcaagggcccttttttt tacatttcttgcaatactgatggtagaatgcataataatgcagttctcattggctcccgtttgtttgcagttgccataca gtgcctttccattcgtttaacctttcccaccccctccccttcccttcccctccccttcccttccccatctgaacggaata aactggatgttcagctggtgtttt |
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| Transcript ID | habu1_s889_g03246.t2 |
| Definition | - |
>habu1_s889_g03246.t2 gcgggatttccgaagcatcgactcgacatggctttcccgcccccgaaggaaggtgttggcagaatcaccaaggattgctg gaacaattctgatgttccagctctcactacgtgcagcaacgctgatatttttcggcgaataaacgccatgcttgataata ctcttgacttcagtggggtctgcacaacgcccatcacaaaggaaaggagggagctactgccagagtttccagactccgag ggaacaggggccgcaagcaggatgctcttccccgcttctgtccaggagtctccgcgtggtctgcccgacgccagcgacct gtgccttggattgcagtctctcagcctgccagggtgggataggccgtggagcacccaggatacagatgctgcagcccagc caagcacgcagtctgttctcaacatgctcagccatcctttcgggaagccgtccttgggcttcctgcctctcgatcccatc ggctcagagctgagtgagaatcttccaactccaaccttgagggcctcccgcttggagagcagtcgttcccttctgtattc gcgttccagcagtccctccgactccgacactagtggattcagctctggatccgaccatctttcagatctgatctcgagtc tccgtatctcacctcctctgccattcctgcctatcggaggcctcaccagagatcccttgaatggagcagggtctcacctg gatcaagagcaggctgccttggctgccgtcacctcctccaccccagccgccttgtccaagcagtggcctggggcctcttc ctggtcatcctggaacatcacggactctccagaagatctcttcagcatagaaagagaagccagactccacaagcaagccg cagctgtgaacgaggcaacctgcacttggagtgggcagctgccacctcggaactacaaaaatcccgtttactcctgcaag gtgtttttaggaggtgttccctgggacatcacagaagcgggtctgatcagcaccttccgtgtgtttggctcgctgagagt ggagtggcctggtaaggatagcaagcatccccgctgccctcccaaaggtaatatgcctaaaggttatgcctacctggtgt ttgaatctgagaagtctgtgcgtgccttgctccaaaactgctcccgggatctgctgagccccagtggcctgagcgagtat tacttcaagatgtctagccgtagaatgagatgcaaggaggtgcaggtgatcccatgggtcttggcagatagcaactttgt gcgcagcccaactcagagactggaccctgggaaaacggtcttcgtgggagcccttcacgggatgctgaatgcagaggcct tggcaggaatcctcaacgacctgtttgggggagttgtgtatgcaggtattgacacagacaagcacaagtatcccattgga tctggccgtgttacctttaacaaccagcgtagctatctgaaagcagtcagtgctgcatttgtggagatcaaaacaacaaa gtttacaaaaaaggttcagattgatccgtatctggaagatgccatgtgtcaagtttgcaggtctcagccgggtccgttct tctgtagagatcagatgtgcttcaagtacttctgtcgctcttgctggcactggaaacattccatggagatcctacaccac caccgtccattgatgcgtaaccagaagaatcgcgacgccagctagagctgtttgccgggccaagctcttccgttgactat agggaagagaagcccaccgatcctagttggtgccatacccaggctgggggagatgcccgtctgaaggactaacggggaac cttgccttcacgtttgcacttgctggtctttctttgtttctgcactaatgcacagtgaagtttttttttttggtcggggg tttgtttggggatttttgagaggggagggcccctcgaaacaattctgcagttcccagactttggttccttggttgctgac gagaagcatcaagagatcataggttgagaaggtattgaatgcagatgccttcaaatttcttatttatcaagggccctttt ttttacatttcttgcaatactgatggtagaatgcataataatgcagttctcattggctcccgtttgtttgcagttgccat acagtgcctttccattcgtttaacctttcccaccccctccccttcccttcccctccccttcccttccccatctgaacgga ataaactggatgttcagctggtgtttt |
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| Transcript ID | habu1_s889_g03246.t3 |
| Definition | - |
>habu1_s889_g03246.t3 gcgggatttccgaagcatcgactcgacatggctttcccgcccccgaaggaaggtgttggcagaatcaccaaggattgctg gaacaattctgatgttccagctctcactacgtgcagcaacgctgatatttttcggcgaataaacgccatgcttgataata ctcttgacttcagtggggtctgcacaacgcccatcacaaaggaaaggagggagctactgccagagtttccagactccgag ggaacaggggccgcaagcaggatgctcttccccgcttctgtccaggagtctccgcgtggtctgcccgacgccagcgacct gtgccttggattgcagtctctcagcctgccagggtgggataggccgtggagcacccaggatacagatgctgcagcccagc caagcacgcagtctgttctcaacatgctcagccatcctttcgggaagccgtccttgggcttcctgcctctcgatcccatc ggctcagagctgagtgagaatcttccaactccaaccttgagggcctcccgcttggagagcagtcgttcccttctgtattc gcgttccagcagtccctccgactccgacactagtggattcagctctggatccgaccatctttcagatctgatctcgagtc tccgtatctcacctcctctgccattcctgcctatcggaggcctcaccagagatcccttgaatggagcagggtctcacctg gatcaagagcaggctgccttggctgccgtcacctcctccaccccagccgccttgtccaagcagtggcctggggcctcttc ctggtcatcctggaacatcacggactctccagaagatctcttcagcatagaaagagaagccagactccacaagcaagccg cagctgtgaacgaggcaacctgcacttggagtgggcagctgccacctcggaactacaaaaatcccgtttactcctgcaag gtgtttttaggaggtgttccctgggacatcacagaagcgggtctgatcagcaccttccgtgtgtttggctcgctgagagt ggagtggcctggtaaggatagcaagcatccccgctgccctcccaaaggttatgcctacctggtgtttgaatctgagaagt ctgtgcgtgccttgctccaaaactgctcccgggatctgctgagccccagtggcctgagcgagtattacttcaagatgtct agccgtagaatgagatgcaaggaggtgcaggtgatcccatgggtcttggcagatagcaactttgtgcgcagcccaactca gagactggaccctgggaaaacggtcttcgtgggagcccttcacgggatgctgaatgcagaggccttggcaggaatcctca acgacctgtttgggggagttgtgtatgcaggtattgacacagacaagcacaagtatcccattggatctggccgtgttacc tttaacaaccagcgtagctatctgaaagcagtcagtgctgcatttgtggagatcaaaacaacaaagtttacaaaaaaggt tcagattgatccgtatctggaagatgccatgtgtcaagtttgcaggtctcagccgggtccgttcttctgtagagatcaga tgtgcttcaagtacttctgtcgctcttgctggcactggaaacattccatggagatcctacaccaccaccgtccattgatg cgtaaccagaagaatcgcgacgccagctagagctgtttgccgggccaagctcttccgttgactatagggaagagaagccc accgatcctagttggtgccatacccaggctgggggagatgcccgtctgaaggactaacggggaaccttgccttcacgttt gcacttgctggtctttctttgtttctgcactaatgcacagtgaagtttttttttttggtcgggggtttgtttggggattt ttgagaggggagggcccctcgaaacaattctgcagttcccagactttggttccttggttgctgacgagaagcatcaagag atcataggttgagaaggtattgaatgcagatgccttcaaatttcttatttatcaagggcccttttttttacatttcttgc aatactgatggtagaatgcataataatgcagttctcattggctcccgtttgtttgcagttgccatacagtgcctttccat tcgtttaacctttcccaccccctccccttcccttcccctccccttcccttccccatctgaacggaataaactggatgttc agctggtgtttt |
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Protein
| Protein ID | habu1_s889_g03246.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03246.t1 MAFPPPKEGVGRITKDCWNNSDVPALTTCSNADIFRRINAMLDNTLDFSGVCTTPITKERRELLPGDLMKFPDSEGTGAA SRMLFPASVQESPRGLPDASDLCLGLQSLSLPGWDRPWSTQDTDAAAQPSTQSVLNMLSHPFGKPSLGFLPLDPIGSELS ENLPTPTLRASRLESSRSLLYSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPIGGLTRDPLNGAGSHLDQEQA ALAAVTSSTPAALSKQWPGASSWSSWNITDSPEDLFSIEREARLHKQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGG VPWDITEAGLISTFRVFGSLRVEWPGKDSKHPRCPPKGYAYLVFESEKSVRALLQNCSRDLLSPSGLSEYYFKMSSRRMR CKEVQVIPWVLADSNFVRSPTQRLDPGKTVFVGALHGMLNAEALAGILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQR SYLKAVSAAFVEIKTTKFTKKVQIDPYLEDAMCQVCRSQPGPFFCRDQMCFKYFCRSCWHWKHSMEILHHHRPLMRNQKN RDAS |
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| Protein ID | habu1_s889_g03246.t2 |
| Definition | - |
>habu1_s889_g03246.t2 MAFPPPKEGVGRITKDCWNNSDVPALTTCSNADIFRRINAMLDNTLDFSGVCTTPITKERRELLPEFPDSEGTGAASRML FPASVQESPRGLPDASDLCLGLQSLSLPGWDRPWSTQDTDAAAQPSTQSVLNMLSHPFGKPSLGFLPLDPIGSELSENLP TPTLRASRLESSRSLLYSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPIGGLTRDPLNGAGSHLDQEQAALAA VTSSTPAALSKQWPGASSWSSWNITDSPEDLFSIEREARLHKQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWD ITEAGLISTFRVFGSLRVEWPGKDSKHPRCPPKGNMPKGYAYLVFESEKSVRALLQNCSRDLLSPSGLSEYYFKMSSRRM RCKEVQVIPWVLADSNFVRSPTQRLDPGKTVFVGALHGMLNAEALAGILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQ RSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDAMCQVCRSQPGPFFCRDQMCFKYFCRSCWHWKHSMEILHHHRPLMRNQK NRDAS |
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| Protein ID | habu1_s889_g03246.t3 |
| Definition | - |
>habu1_s889_g03246.t3 MAFPPPKEGVGRITKDCWNNSDVPALTTCSNADIFRRINAMLDNTLDFSGVCTTPITKERRELLPEFPDSEGTGAASRML FPASVQESPRGLPDASDLCLGLQSLSLPGWDRPWSTQDTDAAAQPSTQSVLNMLSHPFGKPSLGFLPLDPIGSELSENLP TPTLRASRLESSRSLLYSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPIGGLTRDPLNGAGSHLDQEQAALAA VTSSTPAALSKQWPGASSWSSWNITDSPEDLFSIEREARLHKQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWD ITEAGLISTFRVFGSLRVEWPGKDSKHPRCPPKGYAYLVFESEKSVRALLQNCSRDLLSPSGLSEYYFKMSSRRMRCKEV QVIPWVLADSNFVRSPTQRLDPGKTVFVGALHGMLNAEALAGILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLK AVSAAFVEIKTTKFTKKVQIDPYLEDAMCQVCRSQPGPFFCRDQMCFKYFCRSCWHWKHSMEILHHHRPLMRNQKNRDAS |
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