Gene
| Gene Model ID | habu1_s889_g03248 |
|---|---|
| Locus | habu1_scaffold889 : 1279362 ... 1287063 : + |
| To GenomeBrowser | habu1_scaffold889:1279362..1287063 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| photoreceptor-specific nuclear receptor | GO:0000122 GO:0003707 GO:0004879 GO:0005634 GO:0005667 GO:0008270 GO:0008285 GO:0030522 GO:0042462 GO:0043401 GO:0043565 GO:0045872 GO:0045944 GO:0060041 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03248.t2 | 1 | 1 | zf-C4 | 21 | 90 | 5.3e-28 | 97.0 | 8.1e-32 | 6.0e-28 | 96.8 |
| habu1_s889_g03248.t2 | 1 | 1 | Hormone_recep | 205 | 384 | 4.3e-31 | 107.6 | 8.3e-35 | 6.2e-31 | 107.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 10.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s889_g03248.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03248.t1 tttcgccatgtcttccgagatcacagaatcttggtatatgagccttatattctgacttctgtcttgtaactgcttctgtt tcacctttcccttcatcaataatataaaacctgctcttcaaggtagtacgttcttctcgctgaaaaacctgccttataaa atattcagttgtgctcagcagctgcccttgtaggtttgagtgaacttttcttccccaaaacctttgttcctgggtctcaa gttcaaagcccagggataagaagtcagaactctccacaaagaagcctcgagaccatctctctcgtcccacggaccatcag ccactgctatgatggcctccccggtgaaatcgttgatgaacagaggaatggaggccagtccgttagagctcagtctggct ccaggaaaagcagggagccccgtgttgctgtgcaaagtatgtggcgataccagcagtgggaagcattatggcatctacgc ttgcaatggctgcagcggtttcttcaaacggagtgtccgccggaagctcatttataggtgccaggttggcagtggaatgt gccctgtggacaaagcgcaccgaaaccagtgccaagcttgtcgcttgaagaaatgtctccaggcgggcatgaataaagac gcggttcagaacgaacgccagccacgcagcacggctcacgtgcaccttgactccacggacctgcattcggaacagcagcc agaacgtgtggctaccacccagggcgctccgacaccgccccacccttccctgcagagccacagggttcctcccggctgct ctataagtggggttttgagggcccaaggggtaactccccccaacagccaccgttttatggccagcctgatgacagcggag acttgtgccaagctggagccagaggacgcagaggaaaacatcgatgtgaccggtaatgagccggaacacgtggggacaga ggctccccgatccccacaccccgccactggcccagaaagtgtttatgagatctccgcgcgactccttttcatggctgtga aatgggcaaaaaaccttccagttttctcaaacctacctttccgtgatcaggtgattttactggaagaagcttggagtgaa ttgttcctactttgtgccatccagtggtctttgcctctggaaacctgccccctcctcgctttgtcagagctcacctccac cttccacgccaaggcggtgtctggaggaacggatatctgtgcgctgcaagaaataattgcacgcttcaaaacactggcgg tggatcccactgaatttgcctgtatgaaggcaattgttctgtttaaaccagaaacaagaggattgaaggatccagaccag gtagaaaatttgcaggatcagtcacaagtgatgctgggacaacacactcatatacattatcctagtcagccagtcaggtt tggaaaattactactgctgcttccttcactgaaattcatttcttcggagcgcattgaggttctatttttccgcagaacca ttgggaacacccctatggagaagctgctgtgtgacatgttcaaaaactaacatgccttttagaggagcagttgaaaagtc taagcaggttcctctggatctgaaatgcaagcaggaggaggagagcaaagaaacctcttcagaagatgtttgggatctgg gctggaagccttaagtgatcctaggcaatgctggtcattcaactataaaaggcatcccacagtacaaaaac |
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| Transcript ID | habu1_s889_g03248.t2 |
| Definition | - |
>habu1_s889_g03248.t2 tttcgccatgtcttccgagatcacagaatcttggtatatgagccttatattctgacttctgtcttgtaactgcttctgtt tcacctttcccttcatcaataatataaaacctgctcttcaaggtagtacgttcttctcgctgaaaaacctgccttataaa atattcagttgtgctcagcagctgcccttgtaggtttgagtgaacttttcttccccaaaacctttgttcctgggtctcaa ggagccctgaagaggaaggactcacacatgggcatagcacagaccaagcagacatgaagtatccagaagaacaagggttg tgatggtctggaggacggtctgttaagaggcttggagcagagttgagtttttccagtgaaagagtctacattgaagcagt tcttttggcaatttatccagcctcctcgagggaaaactggccagtccacaagggtttcctgcatctgggcctccagttca aagcccagggataagaagtcagaactctccacaaagaagcctcgagaccatctctctcgtcccacggaccatcagccact gctatgatggcctccccggtgaaatcgttgatgaacagaggaatggaggccagtccgttagagctcagtctggctccagg aaaagcagggagccccgtgttgctgtgcaaagtatgtggcgataccagcagtgggaagcattatggcatctacgcttgca atggctgcagcggtttcttcaaacggagtgtccgccggaagctcatttataggtgccaggttggcagtggaatgtgccct gtggacaaagcgcaccgaaaccagtgccaagcttgtcgcttgaagaaatgtctccaggcgggcatgaataaagacgcggt tcagaacgaacgccagccacgcagcacggctcacgtgcaccttgactccacggacctgcattcggaacagcagccagaac gtgtggctaccacccagggcgctccgacaccgccccacccttccctgcagagccacagggttcctcccggctgctctata agtggggttttgagggcccaaggggtaactccccccaacagccaccgttttatggccagcctgatgacagcggagacttg tgccaagctggagccagaggacgcagaggaaaacatcgatgtgaccggtaatgagccggaacacgtggggacagaggctc cccgatccccacaccccgccactggcccagaaagtgtttatgagatctccgcgcgactccttttcatggctgtgaaatgg gcaaaaaaccttccagttttctcaaacctacctttccgtgatcaggtgattttactggaagaagcttggagtgaattgtt cctactttgtgccatccagtggtctttgcctctggaaacctgccccctcctcgctttgtcagagctcacctccaccttcc acgccaaggcggtgtctggaggaacggatatctgtgcgctgcaagaaataattgcacgcttcaaaacactggcggtggat cccactgaatttgcctgtatgaaggcaattgttctgtttaaaccagaaacaagaggattgaaggatccagaccaggtaga aaatttgcaggatcagtcacaagtgatgctgggacaacacactcatatacattatcctagtcagccagtcaggtttggaa aattactactgctgcttccttcactgaaattcatttcttcggagcgcattgaggttctatttttccgcagaaccattggg aacacccctatggagaagctgctgtgtgacatgttcaaaaactaacatgccttttagaggagcagttgaaaagtctaagc aggttcctctggatctgaaatgcaagcaggaggaggagagcaaagaaacctcttcagaagatgtttgggatctgggctgg aagccttaagtgatcctaggcaatgctggtcattcaactataaaaggcatcccacagtacaaaaac |
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Protein
| Protein ID | habu1_s889_g03248.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03248.t1 MEASPLELSLAPGKAGSPVLLCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQVGSGMCPVDKAHRNQCQACRL KKCLQAGMNKDAVQNERQPRSTAHVHLDSTDLHSEQQPERVATTQGAPTPPHPSLQSHRVPPGCSISGVLRAQGVTPPNS HRFMASLMTAETCAKLEPEDAEENIDVTGNEPEHVGTEAPRSPHPATGPESVYEISARLLFMAVKWAKNLPVFSNLPFRD QVILLEEAWSELFLLCAIQWSLPLETCPLLALSELTSTFHAKAVSGGTDICALQEIIARFKTLAVDPTEFACMKAIVLFK PETRGLKDPDQVENLQDQSQVMLGQHTHIHYPSQPVRFGKLLLLLPSLKFISSERIEVLFFRRTIGNTPMEKLLCDMFKN |
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| Protein ID | habu1_s889_g03248.t2 |
| Definition | - |
>habu1_s889_g03248.t2 MEASPLELSLAPGKAGSPVLLCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQVGSGMCPVDKAHRNQCQACRL KKCLQAGMNKDAVQNERQPRSTAHVHLDSTDLHSEQQPERVATTQGAPTPPHPSLQSHRVPPGCSISGVLRAQGVTPPNS HRFMASLMTAETCAKLEPEDAEENIDVTGNEPEHVGTEAPRSPHPATGPESVYEISARLLFMAVKWAKNLPVFSNLPFRD QVILLEEAWSELFLLCAIQWSLPLETCPLLALSELTSTFHAKAVSGGTDICALQEIIARFKTLAVDPTEFACMKAIVLFK PETRGLKDPDQVENLQDQSQVMLGQHTHIHYPSQPVRFGKLLLLLPSLKFISSERIEVLFFRRTIGNTPMEKLLCDMFKN |
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