Gene
| Gene Model ID | habu1_s889_g03251 |
|---|---|
| Locus | habu1_scaffold889 : 1397591 ... 1419517 : - |
| To GenomeBrowser | habu1_scaffold889:1397591..1419517 |
| Genes list of scaffold | habu1_scaffold889 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03251.t1 | 1 | 1 | GRAM | 39 | 89 | 5.9e-12 | 44.9 | 2.3e-15 | 1.7e-11 | 43.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03251.t1 | gi|602644116|ref|XP_007428512.1| | PREDICTED: GRAM domain-containing protein 2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s889_g03251.t1 | gi|602644114|ref|XP_007428511.1| | PREDICTED: GRAM domain-containing protein 2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s889_g03251.t1 | gi|663239417|ref|XP_008489231.1| | PREDICTED: GRAM domain-containing protein 2 [Calypte anna] | 0.0 |
| habu1_s889_g03251.t1 | gi|701431824|ref|XP_010004210.1| | PREDICTED: GRAM domain-containing protein 2 [Chaetura pelagica] | 0.0 |
| habu1_s889_g03251.t1 | gi|696999465|ref|XP_009565917.1| | PREDICTED: GRAM domain-containing protein 2 [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 1.4 |
| Nose | 2.0 |
| Brain-1 | 0.8 |
| Eye | 4.1 |
| fetal fibroblast | 1.4 |
| venom gland-2 | 2.6 |
| Brain-2 | 1.2 |
| Spleen | 0.2 |
| Lung | 1.3 |
| Liver | 0.0 |
| Kidney | 0.8 |
| Pancreas | 0.2 |
| Small intestine | 0.8 |
| Large intestine | 1.3 |
| Stomach | 0.2 |
| heart | 2.1 |
| ovary | 8.9 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s889_g03251.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03251.t1 aaccggtcgtaagtcgaggactacccaaccggtcgtaagtcgaggactttccctgcccgggagcgccgcgcatgcgcagt tccgccccctgcgccagccgaggcgtagctggcaagcggcagagacagagcaggccgaccaccagctggcccagcccaag ggaggctcccaataagtataattctcagtatcacaagttattcaaagacatccccactgaagaaagcgtggttaaagtct gctcctgcgcccttcagcgagacatcctgatccagggccgtctctacatttctccaaactggctctgcttctatgcaaat ctttttgggaaggatatcaagtacatctttgtgtccctcatttcccgagacagcgtctatgatgttttgcggcgagtctg cacccacttacaggtctccagcaaaaaaagtctgagtttgaaagagctcgccgaagagccagatgcggtatccttggagg tcattgtcccagagctgaagtggagaaggaggtcctcggcgtcgctctccctcaccctcccagattccggcttccagtgt atccaccgaacttcgatcagcaacctcagtgctaaggacaactcctgcaactcggaggagcccctggcatcagaaagtac aataaactctgaggaggaagaggaggaggaagaggaggaggaggaggaggagttagtagtggaccaaagctacaaagcag aattgagaccagctgattatcagctgctgaaaatcttcatagtgttaatctgccttttggtgttgtcctcatcgtacttg gccttccgaattttccggctggagcagcaactctcctccttgaaccaggattacttttcccgagtatctcaaagttcact agggaggtgtctgtctgagccacttccagatggtatctggatgaatggatggatgcctgtctccatcagggtcaccttcc ttctctctacagtctccggtcagccgcaacccggcaacaggcctggagtatttgacaagagcagctgtcaagagaccccc catcattttaaaacagggattttgccttccctgggagcagctgggattgtgatttagacgctacacattccagaatatgc tggatatggatcccacaattcagcagttgtatggaaacaaaaacagactgccactgcgcatcacttttcagatttacttt ttaatttttgactggagatttccccaaacataatgcaattatgcaaataagagaaattacgaagtgcttctgcccaacaa tttcaacatacagtaaaacaattgaacttgttacttaaa |
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Protein
| Protein ID | habu1_s889_g03251.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03251.t1 MRSSAPCASRGVAGKRQRQSRPTTSWPSPREAPNKYNSQYHKLFKDIPTEESVVKVCSCALQRDILIQGRLYISPNWLCF YANLFGKDIKYIFVSLISRDSVYDVLRRVCTHLQVSSKKSLSLKELAEEPDAVSLEVIVPELKWRRRSSASLSLTLPDSG FQCIHRTSISNLSAKDNSCNSEEPLASESTINSEEEEEEEEEEEEEELVVDQSYKAELRPADYQLLKIFIVLICLLVLSS SYLAFRIFRLEQQLSSLNQDYFSRVSQSSLGRCLSEPLPDGIWMNGWMPVSIRVTFLLSTVSGQPQPGNRPGVFDKSSCQ ETPHHFKTGILPSLGAAGIVI |
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