Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s889_g03252
Locus habu1_scaffold889 : 1441340 ... 1463147 : -
To GenomeBrowser habu1_scaffold889:1441340..1463147
Genes list of scaffold habu1_scaffold889

Annotation by Blast2GO
Annotation GO
pyruvate kinase pkm isoform x2 EC:2.7.1.40 GO:0000287 GO:0004743 GO:0005634 GO:0005739 GO:0005886 GO:0005929 GO:0006094 GO:0006096 GO:0006144 GO:0012501 GO:0015976 GO:0016310 GO:0023026 GO:0030955 GO:0031012 GO:0044822 GO:0070062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s889_g03252.t2 1 1 PK 38 390 0.0 555.4 0.0 0.0 555.1
habu1_s889_g03252.t2 1 1 PK_C 437 557 6.7e-29 99.8 4.1e-32 2.0e-28 98.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s889_g03252.t2 gi|637353247|ref|XP_008118746.1| PREDICTED: pyruvate kinase PKM isoform X1 [Anolis carolinensis] 0.0
habu1_s889_g03252.t2 gi|694853016|ref|XP_009467903.1| PREDICTED: pyruvate kinase PKM isoform X2 [Nipponia nippon] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 102.3
Venom grand-1 282.8
Pit, infrared sensing 185.5
Nose 90.9
Brain-1 135.5
Eye 386.9
fetal fibroblast 483.0
venom gland-2 95.5
Brain-2 174.8
Spleen 72.6
Lung 170.3
Liver 11.0
Kidney 194.3
Pancreas 50.0
Small intestine 85.3
Large intestine 383.2
Stomach 271.8
heart 1460.2
ovary 209.6
cheek muscle 2117.1

Transcript
Transcript IDhabu1_s889_g03252.t1
Definition-
>habu1_s889_g03252.t1
ggccctgaatcaccttcaggctgcgctgcgctggccgccgctcagagaggtggagactctccgcgggaactgacctttgg
aagccggatatcaactgtcagcaaccatgtctaccagtgacgctttcatccagacccagcagctgcacgctgccatggca
gacacgtttttggaacacatgtgccgactggacattgattccccaccagtcacggcaagaaatactggcattatttgcac
catcggtccggcttctcggtcagtagaaatgctgaaagaaatgattaaatctggaatgaacgttgcccgtctcaacttct
ctcacggaactcatgagtatcatgcaggaacaatcaagaatgtacgagaagctaccgaaagctttgcttctgatccgatt
tcctacagacctgtcgctgttgccctggatactaaggggccagagattcgaactgggctcatcaaggggagtggtacagc
agaagtggagcttaagaagggtgcaactctgaaagtgactctcgacaacgcttttatggagaagtgcgatgagaatgtat
tgtgggtggactacaaaaatatcaccaaggttgtcgaactcggcagcaaaatctacgtggacgatgggcttatttccctt
aaagtgaaagagaaaggtgctgactttatcataaccgaaattgagaacggagggacgttgggcagcaaaaaaggggtcaa
cttacctggggctgctgtagacctgcctgctgtttccgagaaggacatccaggacctcaagtttggtgtcgagcaggacg
tggacatggtgttcgcctccttcatccgtaaagcggccgacgttcacgctgtcaggaaggtgcttggggaaaaggggaag
aacatcaagatcatcagcaagatcgaaaaccacgagggggttcgcagatttgatgaaattatggaagccagtgacggcat
catggtagcccggggcgatcttggtattgagattccagccgaaaaagtcttccttgcccagaaaatgatgattggccgat
gcaaccgagccggcaagcctattatctgtgctactcagatgttggagagcatgatcaagaagccacgcccgacacgtgcg
gaaggaagcgacgtagccaatgctgtcctggatggagctgactgtatcatgctgtccggagaaactgccaaaggagacta
tcccctggaggctgtccagatgcagcaccttattgctcgcgaagcagaggcagccatctttcacaggcaattgtttgaag
agctccgccggctggcccccctgaaccgagaccctaccgaagccgccgctgtgggtgccgtagaagcctccttcaagtgc
tgcagcggggccattattgtgctcaccaagtctggaagatctgcccacctagtgtccagataccgaccacgggcccccat
tattgctgtgacacgtaatgctcaggctgcccgccaggcccacctttaccgtggcatttttccggtgatgtgcaaggagg
caaccctggatgcctgggctgaggacgttgatctccgcgtcaacatgggaatgaatgttggcaaagctcgtggattcttc
aagtcaggggatctggtcatcgtgctgactggctggcgccctggatccggttacaccaacaccatgcgtgtagtgcctgt
cccgtaaaacggatcccggcaacgaccaccccctcctctcgtctcgccacctgtccctctcttgcattagaccagcagct
gcttgcaatcttgtctgtagaacggatagtgactgccctaagccatgaagcgcagtaatggggggggggagggaaaaaag
agacttcagttatttagtaatacttgaaatagtttgataagtggaacctctcccgtttcttccttgccctgggctatccg
gccttatttgttaggaaccagtatgatccagcagccagggatcgcccagtttctcctctagagctatctgctccgcagag
aaactaggaatatcttggcttatttagtacagcattttaggcgaggcttggtgtcatacgtgtcctgaatcctacctccc
cagcctctctcctttctgtaagtcttgtgtgttgtcatcactctgccaaaaacactccactcgccagctctgctacacct
tagcttgctcagtcttgcagggcctctccagttcttgctgcgtgatacacaaagagtgcttgttccatcgtaagccatga
tgtgcatcacttgaccagaccgacacacactccagtaggggttgacccgaactgcctctaatgccccatggaagttttag
agagcaaatcttaagtttcctgttcctcctttccagtagacctgagggatatcagattatatatatatatatatattttt
cacagtgggttggttcaggaatagatagctcaggttttgacagcataggaagatttggaggaagaaaaaaaaaacatttt
tttctcacgaaacttaacacaggtgagccaggccaccgaaattattcccatccctgcactccacccaatcaaagctacct
agggttgcttgtgctgctgttgttgagttgtcttgtgttgaagttgagccatacctcctgacagtgcactctgtaactct
atatacattacctgctgttaaaagagatgtatcggatcgtcagaagccacttgtacatcaataaagcagagttcaaccca
tcctttc
Transcript IDhabu1_s889_g03252.t2
Definition-
>habu1_s889_g03252.t2
ggccctgaatcaccttcaggctgcgctgcgctggccgccgctcagagaggtggagactctccgcgggaactgacctttgg
aagccggatatcaactgtcagcaaccatgtctaccagtgacgctttcatccagacccagcagctgcacgctgccatggca
gacacgtttttggaacacatgtgccgactggacattgattccccaccagtcacggcaagaaatactggcattatttgcac
catcggtccggcttctcggtcagtagaaatgctgaaagaaatgattaaatctggaatgaacgttgcccgtctcaacttct
ctcacggaactcatgagtatcatgcaggaacaatcaagaatgtacgagaagctaccgaaagctttgcttctgatccgatt
tcctacagacctgtcgctgttgccctggatactaaggggccagagattcgaactgggctcatcaaggggagtggtacagc
agaagtggagcttaagaagggtgcaactctgaaagtgactctcgacaacgcttttatggagaagtgcgatgagaatgtat
tgtgggtggactacaaaaatatcaccaaggttgtcgaactcggcagcaaaatctacgtggacgatgggcttatttccctt
aaagtgaaagagaaaggtgctgactttatcataaccgaaattgagaacggagggacgttgggcagcaaaaaaggggtcaa
cttacctggggctgctgtagacctgcctgctgtttccgagaaggacatccaggacctcaagtttggtgtcgagcaggacg
tggacatggtgttcgcctccttcatccgtaaagcggccgacgttcacgctgtcaggaaggtgcttggggaaaaggggaag
aacatcaagatcatcagcaagatcgaaaaccacgagggggttcgcagatttgatgaaattatggaagccagtgacggcat
catggtagcccggggcgatcttggtattgagattccagccgaaaaagtcttccttgcccagaaaatgatgattggccgat
gcaaccgagccggcaagcctattatctgtgctactcagatgttggagagcatgatcaagaagccacgcccgacacgtgcg
gaaggaagcgacgtagccaatgctgtcctggatggagctgactgtatcatgctgtccggagaaactgccaaaggagacta
tcccctggaggctgtccagatgcagcaccttatagctcgcgaggccgaggccgcagtctttcaccgtcagctgtttgaag
aactttaccgtcacactgctggcaaccacaacccttccgaagccatggctattgctcgcgaagcagaggcagccatcttt
cacaggcaattgtttgaagagctccgccggctggcccccctgaaccgagaccctaccgaagccgccgctgtgggtgccgt
agaagcctccttcaagtgctgcagcggggccattattgtgctcaccaagtctggaagatctgcccacctagtgtccagat
accgaccacgggcccccattattgctgtgacacgtaatgctcaggctgcccgccaggcccacctttaccgtggcattttt
ccggtgatgtgcaaggaggcaaccctggatgcctgggctgaggacgttgatctccgcgtcaacatgggaatgaatgttgg
caaagctcgtggattcttcaagtcaggggatctggtcatcgtgctgactggctggcgccctggatccggttacaccaaca
ccatgcgtgtagtgcctgtcccgtaaaacggatcccggcaacgaccaccccctcctctcgtctcgccacctgtccctctc
ttgcattagaccagcagctgcttgcaatcttgtctgtagaacggatagtgactgccctaagccatgaagcgcagtaatgg
ggggggggagggaaaaaagagacttcagttatttagtaatacttgaaatagtttgataagtggaacctctcccgtttctt
ccttgccctgggctatccggccttatttgttaggaaccagtatgatccagcagccagggatcgcccagtttctcctctag
agctatctgctccgcagagaaactaggaatatcttggcttatttagtacagcattttaggcgaggcttggtgtcatacgt
gtcctgaatcctacctccccagcctctctcctttctgtaagtcttgtgtgttgtcatcactctgccaaaaacactccact
cgccagctctgctacaccttagcttgctcagtcttgcagggcctctccagttcttgctgcgtgatacacaaagagtgctt
gttccatcgtaagccatgatgtgcatcacttgaccagaccgacacacactccagtaggggttgacccgaactgcctctaa
tgccccatggaagttttagagagcaaatcttaagtttcctgttcctcctttccagtagacctgagggatatcagattata
tatatatatatatatttttcacagtgggttggttcaggaatagatagctcaggttttgacagcataggaagatttggagg
aagaaaaaaaaaacatttttttctcacgaaacttaacacaggtgagccaggccaccgaaattattcccatccctgcactc
cacccaatcaaagctacctagggttgcttgtgctgctgttgttgagttgtcttgtgttgaagttgagccatacctcctga
cagtgcactctgtaactctatatacattacctgctgttaaaagagatgtatcggatcgtcagaagccacttgtacatcaa
taaagcagagttcaacccatcctttc

Protein
Protein IDhabu1_s889_g03252.t1
Definition-
>habu1_s889_g03252.t1
MSTSDAFIQTQQLHAAMADTFLEHMCRLDIDSPPVTARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHA
GTIKNVREATESFASDPISYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKVTLDNAFMEKCDENVLWVDYKNIT
KVVELGSKIYVDDGLISLKVKEKGADFIITEIENGGTLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFI
RKAADVHAVRKVLGEKGKNIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPII
CATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVQMQHLIAREAEAAIFHRQLFEELRRLAPLN
RDPTEAAAVGAVEASFKCCSGAIIVLTKSGRSAHLVSRYRPRAPIIAVTRNAQAARQAHLYRGIFPVMCKEATLDAWAED
VDLRVNMGMNVGKARGFFKSGDLVIVLTGWRPGSGYTNTMRVVPVP
Protein IDhabu1_s889_g03252.t2
Definition-
>habu1_s889_g03252.t2
MSTSDAFIQTQQLHAAMADTFLEHMCRLDIDSPPVTARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHA
GTIKNVREATESFASDPISYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKVTLDNAFMEKCDENVLWVDYKNIT
KVVELGSKIYVDDGLISLKVKEKGADFIITEIENGGTLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFI
RKAADVHAVRKVLGEKGKNIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPII
CATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVQMQHLIAREAEAAVFHRQLFEELYRHTAGN
HNPSEAMAIAREAEAAIFHRQLFEELRRLAPLNRDPTEAAAVGAVEASFKCCSGAIIVLTKSGRSAHLVSRYRPRAPIIA
VTRNAQAARQAHLYRGIFPVMCKEATLDAWAEDVDLRVNMGMNVGKARGFFKSGDLVIVLTGWRPGSGYTNTMRVVPVP

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