Gene
| Gene Model ID | habu1_s889_g03255 |
|---|---|
| Locus | habu1_scaffold889 : 1637898 ... 1649065 : + |
| To GenomeBrowser | habu1_scaffold889:1637898..1649065 |
| Genes list of scaffold | habu1_scaffold889 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein subunit beta-5 | GO:0005634 GO:0005886 GO:0007186 GO:0031682 GO:0051087 GO:1901386 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s889_g03255.t1 | 6 | 1 | WD40 | 5 | 30 | 1.54143e-44 | 148.2 | 1.6e-06 | 0.012 | 15.5 |
| habu1_s889_g03255.t1 | 6 | 2 | WD40 | 49 | 79 | 1.54143e-44 | 148.2 | 2.1e-08 | 0.00015 | 21.4 |
| habu1_s889_g03255.t1 | 6 | 3 | WD40 | 83 | 123 | 1.54143e-44 | 148.2 | 2.4e-12 | 1.8e-08 | 33.9 |
| habu1_s889_g03255.t1 | 6 | 4 | WD40 | 127 | 165 | 1.54143e-44 | 148.2 | 8.3e-13 | 6.2e-09 | 35.4 |
| habu1_s889_g03255.t1 | 6 | 5 | WD40 | 185 | 209 | 1.54143e-44 | 148.2 | 2.1e-06 | 0.016 | 15.0 |
| habu1_s889_g03255.t1 | 6 | 6 | WD40 | 215 | 250 | 1.54143e-44 | 148.2 | 2.3e-13 | 1.7e-09 | 37.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s889_g03255.t1 | gi|637353228|ref|XP_008118742.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-5 [Anolis carolinensis] | 0.0 |
| habu1_s889_g03255.t1 | gi|525008745|ref|XP_005052014.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-5 isoform X1 [Ficedula albicollis] | 0.0 |
| habu1_s889_g03255.t1 | gi|525008747|ref|XP_005052015.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-5 isoform X2 [Ficedula albicollis] | 0.0 |
| habu1_s889_g03255.t1 | gi|557265119|ref|XP_006018010.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-5 isoform X2 [Alligator sinensis] | 0.0 |
| habu1_s889_g03255.t1 | gi|602630668|ref|XP_007422247.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-5 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.1 |
| Venom grand-1 | 3.2 |
| Pit, infrared sensing | 8.6 |
| Nose | 7.3 |
| Brain-1 | 49.8 |
| Eye | 36.5 |
| fetal fibroblast | 27.5 |
| venom gland-2 | 1.7 |
| Brain-2 | 37.1 |
| Spleen | 12.2 |
| Lung | 26.1 |
| Liver | 1.0 |
| Kidney | 10.4 |
| Pancreas | 2.7 |
| Small intestine | 9.5 |
| Large intestine | 20.1 |
| Stomach | 22.3 |
| heart | 19.4 |
| ovary | 25.3 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s889_g03255.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03255.t1 cgcgtggaggctttgggacagtttgtgatgaaaacacggaggaccctgaaaggccatgggaataaagtcctctgtatgga ttggtgcaaggacaaaagaagaattgtcagctcgtcccaggatgggaaggtgattgtttgggatgccttcaccaccaata aggagcacgcggtgacaatgccgtgcacatgggtgatggcgtgtgcatatgctccatctggatgcgccattgcatgtggt ggtctggataacaaatgctctgtataccccctgacctttgaaaaaaacgagaacatggccgctaagaagaaatcggtcgc tatgcatactaactacttgtcagcttgcagcttcactaattctgacatgcagatcttgactgcaagcggtgatggtacct gtgccctctgggacgttgaaagtgggcagctgctacagagtttccacggacatggggcagatgtcttgtgcctggatctt gctccttcggaaacagggaacacatttgtgtcggggggatgtgataaaaaagcaatgatctgggacatgcgtaccgggca gtgcattcagtccttcgaaacccatgagtcggatattaatggtgtcagatactacccaagtggagacgcctttgcctctg gctcagatgatgccacatgccgtttatatgacctccgagcggacagagaggtggctatttattccaaagaaagcatcatc tttggggcgtccagtgtggatttttctcttagtggacgcttattatttgcgggctacaacgactacaccataaacgtttg ggatgttctgaaaggatcgcgcgtcgccattttgtttggtcacgagaaccgcgttagcactttgagggtttcacccgacg ggactgcgttttgttctggatcgtgggatcacactctgaggatctgggcttaaatagcagggcggtttcccaacatgtat tcacataggcatcataggatcacacacaccacggaacatcaatttaatgggggggggagagggtgaaatctaccgcaaag actctatcacgaccttaaagggatggtgaaaagttggaagaagacaccttgttaggcttaattgcacagctgcccaactc aaagctacttctagctagacaaataaaaacatacctttatcatacacag |
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Protein
| Protein ID | habu1_s889_g03255.t1 |
|---|---|
| Definition | - |
>habu1_s889_g03255.t1 MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFEKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDV ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMIWDMRTGQCIQSFETHESDINGVRYYPSGDAFASGSDDAT CRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVAILFGHENRVSTLRVSPDGTAFCS GSWDHTLRIWA |
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