Gene
| Gene Model ID | habu1_s9000_g19060 |
|---|---|
| Locus | habu1_scaffold9000 : 209655 ... 221395 : - |
| To GenomeBrowser | habu1_scaffold9000:209655..221395 |
| Genes list of scaffold | habu1_scaffold9000 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9000_g19060.t2 | gi|564263185|ref|XP_006270461.1| | PREDICTED: zinc finger protein 839 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.0 |
| Venom grand-1 | 7.2 |
| Pit, infrared sensing | 6.9 |
| Nose | 5.3 |
| Brain-1 | 5.4 |
| Eye | 4.3 |
| fetal fibroblast | 6.3 |
| venom gland-2 | 4.2 |
| Brain-2 | 6.0 |
| Spleen | 4.1 |
| Lung | 2.9 |
| Liver | 10.5 |
| Kidney | 3.6 |
| Pancreas | 3.9 |
| Small intestine | 5.4 |
| Large intestine | 4.3 |
| Stomach | 5.1 |
| heart | 3.6 |
| ovary | 12.2 |
| cheek muscle | 5.7 |
Transcript
| Transcript ID | habu1_s9000_g19060.t1 |
|---|---|
| Definition | - |
>habu1_s9000_g19060.t1 agatggggccttcccctgccgcgcttgcctcctaagatgtcttctctggggttcaggagcgacgctgctgcggctgctgc cgcctctgctgctgagggcccggcaccaggccctccaggcgagaggccgttgatgccggtcactgaattccgctgcggga agccgtatcgggcgtccgaggcagtggctggaagtgtcccgggaaagctacaagatgaggggctccctcccccggtcgga aaggcggcggagagggccgaggaccgccgtcccgccggggctgccgtattagctcaagggaccgcctgccccacttccct cttgccgactcagaggttcagctcggcggcttcagcctcaccttcggggtctcagctgccgacggtcggcaccctccaca acccgccacagccggggcaggatggagctcaggaggtcggatccgagacagagtctcttcctttgacagagacccttctg ttcaagttggaaaccagtcatgtccaagtagagtctgatcaaataaaagagaagaaaagtttggaattattttctgcaag agctgtgtctaaaaatatagctgggtctcaagtagttgagaagaattctaagcctttaggactcagtgccattaatcctg agatttttcagatacaatcttttccaggaactggatctcaacaatttttcttatttaattcttctaaacctacagttcaa ctatttcttccgtcccccctacatccccttggacaagtaccagtaagtaaaataattgcacatgggcagaaacataaatc cattacaaaaggtagggaagattcttcaaatgtttctttggtttcaacttgttcagcaaaaacccttgtaaatgagggga agcagccaaaagagcaaaagattaaaaaatctttgaaagtggcaactcgttctgggcggatttctcgccctccaaaatac aaagttaaggactacaaatttattaaaacagaagacttggctgattgtcacccatctgattctgatgactattctgagct gagcttagaagatgatgaatgcaacaaagtaaaggaagtatgtgaattatttaacccctttaactatgacctgcgaccaa aattgtttaagtgtcagaactgtgaaaaatcctacataggaaaaggcggattatcaaggcactacaaaataaatccatgc catgggcaccgagagtcttcagaatcttctcctataaatagattttctagaatgacagagctggagtgtgctgaaaaggc aaattgtgaaagcaaccatcaaccttcttcacctttaccagttactcttgctttagtaagcaaaaatggactagctacag acttggaaaaaaatcttcaaacagaaggtgaacagcagtctgatatttctgcagaagatagaaagtctgaagaaccatac agcacccatttggggcctggaagaagaaaacggcagagaagatcttatcaaccaaagatggctaatagatcaagatgttc tacaacattcagcagatctggtcaattatcttccaattctctcaatagtatctcagcagagaatcttaatggatttaaaa gaaaagctaagctaaaagagctgattcagcagtgtcccaacgaagagtttatggagttggtgattccacgtctgacaaca gttgttactgtatttgaattcctactgatgaaggcagagaaaaaatgtcgaacaaaagcagtctttccagatgtttaccg ggagtttgaagagctccattcaatggtaaagaaaatgagtcaagattattttaataattctgaattaaagcaacagttag aaataaaaaaccacaaggtagctgaatcactaggaattacagatagttgtcttgaagtgccaaaaatccagacaaattct tttcctgaatgtactgaatctactgatgatcctatattgctccatatttcaggacacaaatgagcagctgagaaatgtgc agcaaaaatgttctgcaagaatatggaaaaaaagaatatgaattgctccaaccaagaattgtagatgataaagcaaatac agatttatgtgatcaacacactcaagaaaaattgaacatttacagcctgtaaatataccaggattagattatttgagatg cccaattgacaatagttcacaagaagaacaaagataaattcaagttgggacacagtaaatgaaatgacttattatatccc ttgaaacatctgaaaaatacagtcatcattattccttggtttcttcatgaaaaaacagtaaaatatatcaagaacttaag aaaaaatgctttctgtaaacaaattctgaactttcttaaattttaatagtttcaacagtattaaacatcacaggaacagt tcatcagtttagatctcaggaaattgaatggactagcttcatccttccttgaaaatatgtgattaattaatagtggaagt attttagtggaagaaaacaagaaaatattaagtacaacatgataatgttgaagattatggaaactaggaacttttcttgt gggtataggctttgcttcttcctggtactatatattatacatctgtttgtgaaagaatttgctgctgctatgtatatttc taaaaattctttggaagttgcagtacttctaacagtgatactaaacttaagccattataaaaatatttttgaaacagttt tgaaagtctacctgaaatgtatattaaatatgattttttttagttccaca |
|
| Transcript ID | habu1_s9000_g19060.t2 |
| Definition | - |
>habu1_s9000_g19060.t2 agatggggccttcccctgccgcgcttgcctcctaagatgtcttctctggggttcaggagcgacgctgctgcggctgctgc cgcctctgctgctgagggcccggcaccaggccctccaggcgagaggccgttgatgccggtcactgaattccgctgcggga agccgtatcgggcgtccgaggcagtggctggaagtgtcccgggaaagctacaagatgaggggctccctcccccggtcgga aaggcggcggagagggccgaggaccgccgtcccgccggggctgccgtattagctcaagggaccgcctgccccacttccct cttgccgactcagaggttcagctcggcggcttcagcctcaccttcggggtctcagctgccgacggtcggcaccctccaca acccgccacagccggggcaggatggagctcaggaggtcggatccgagacagagtctcttcctttgacagagacccttctg ttcaagttggaaaccagtcatgtccaagtagagtctgatcaaataaaagagaagaaaacaaaaacccttgtaaatgaggg gaagcagccaaaagagcaaaagattaaaaaatctttgaaagtggcaactcgttctgggcggatttctcgccctccaaaat acaaagttaaggactacaaatttattaaaacagaagacttggctgattgtcacccatctgattctgatgactattctgag ctgagcttagaagatgatgaatgcaacaaagtaaaggaagtatgtgaattatttaacccctttaactatgacctgcgacc aaaattgtttaagtgtcagaactgtgaaaaatcctacataggaaaaggcggattatcaaggcactacaaaataaatccat gccatgggcaccgagagtcttcagaatcttctcctataaatagattttctagaatgacagagctggagtgtgctgaaaag gcaaattgtgaaagcaaccatcaaccttcttcacctttaccagttactcttgctttagtaagcaaaaatggactagctac agacttggaaaaaaatcttcaaacagaaggtgaacagcagtctgatatttctgcagaagatagaaagtctgaagaaccat acagcacccatttggggcctggaagaagaaaacggcagagaagatcttatcaaccaaagatggctaatagatcaagatgt tctacaacattcagcagatctggtcaattatcttccaattctctcaatagtatctcagcagagaatcttaatggatttaa aagaaaagctaagctaaaagagctgattcagcagtgtcccaacgaagagtttatggagttggtgattccacgtctgacaa cagttgttactgtatttgaattcctactgatgaaggcagagaaaaaatgtcgaacaaaagcagtctttccagatgtttac cgggagtttgaagagctccattcaatggtaaagaaaatgagtcaagattattttaataattctgaattaaagcaacagtt agaaataaaaaaccacaaggtagctgaatcactaggaattacagatagttgtcttgaagtgccaaaaatccagacaaatt cttttcctgaatgtactgaatctactgatgatcctatattgctccatatttcaggacacaaatgagcagctgagaaatgt gcagcaaaaatgttctgcaagaatatggaaaaaaagaatatgaattgctccaaccaagaattgtagatgataaagcaaat acagatttatgtgatcaacacactcaagaaaaattgaacatttacagcctgtaaatataccaggattagattatttgaga tgcccaattgacaatagttcacaagaagaacaaagataaattcaagttgggacacagtaaatgaaatgacttattatatc ccttgaaacatctgaaaaatacagtcatcattattccttggtttcttcatgaaaaaacagtaaaatatatcaagaactta agaaaaaatgctttctgtaaacaaattctgaactttcttaaattttaatagtttcaacagtattaaacatcacaggaaca gttcatcagtttagatctcaggaaattgaatggactagcttcatccttccttgaaaatatgtgattaattaatagtggaa gtattttagtggaagaaaacaagaaaatattaagtacaacatgataatgttgaagattatggaaactaggaacttttctt gtgggtataggctttgcttcttcctggtactatatattatacatctgtttgtgaaagaatttgctgctgctatgtatatt tctaaaaattctttggaagttgcagtacttctaacagtgatactaaacttaagccattataaaaatatttttgaaacagt tttgaaagtctacctgaaatgtatattaaatatgattttttttagttccaca |
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Protein
| Protein ID | habu1_s9000_g19060.t1 |
|---|---|
| Definition | - |
>habu1_s9000_g19060.t1 MSSLGFRSDAAAAAAASAAEGPAPGPPGERPLMPVTEFRCGKPYRASEAVAGSVPGKLQDEGLPPPVGKAAERAEDRRPA GAAVLAQGTACPTSLLPTQRFSSAASASPSGSQLPTVGTLHNPPQPGQDGAQEVGSETESLPLTETLLFKLETSHVQVES DQIKEKKSLELFSARAVSKNIAGSQVVEKNSKPLGLSAINPEIFQIQSFPGTGSQQFFLFNSSKPTVQLFLPSPLHPLGQ VPVSKIIAHGQKHKSITKGREDSSNVSLVSTCSAKTLVNEGKQPKEQKIKKSLKVATRSGRISRPPKYKVKDYKFIKTED LADCHPSDSDDYSELSLEDDECNKVKEVCELFNPFNYDLRPKLFKCQNCEKSYIGKGGLSRHYKINPCHGHRESSESSPI NRFSRMTELECAEKANCESNHQPSSPLPVTLALVSKNGLATDLEKNLQTEGEQQSDISAEDRKSEEPYSTHLGPGRRKRQ RRSYQPKMANRSRCSTTFSRSGQLSSNSLNSISAENLNGFKRKAKLKELIQQCPNEEFMELVIPRLTTVVTVFEFLLMKA EKKCRTKAVFPDVYREFEELHSMVKKMSQDYFNNSELKQQLEIKNHKVAESLGITDSCLEVPKIQTNSFPECTESTDDPI LLHISGHK |
|
| Protein ID | habu1_s9000_g19060.t2 |
| Definition | - |
>habu1_s9000_g19060.t2 MSSLGFRSDAAAAAAASAAEGPAPGPPGERPLMPVTEFRCGKPYRASEAVAGSVPGKLQDEGLPPPVGKAAERAEDRRPA GAAVLAQGTACPTSLLPTQRFSSAASASPSGSQLPTVGTLHNPPQPGQDGAQEVGSETESLPLTETLLFKLETSHVQVES DQIKEKKTKTLVNEGKQPKEQKIKKSLKVATRSGRISRPPKYKVKDYKFIKTEDLADCHPSDSDDYSELSLEDDECNKVK EVCELFNPFNYDLRPKLFKCQNCEKSYIGKGGLSRHYKINPCHGHRESSESSPINRFSRMTELECAEKANCESNHQPSSP LPVTLALVSKNGLATDLEKNLQTEGEQQSDISAEDRKSEEPYSTHLGPGRRKRQRRSYQPKMANRSRCSTTFSRSGQLSS NSLNSISAENLNGFKRKAKLKELIQQCPNEEFMELVIPRLTTVVTVFEFLLMKAEKKCRTKAVFPDVYREFEELHSMVKK MSQDYFNNSELKQQLEIKNHKVAESLGITDSCLEVPKIQTNSFPECTESTDDPILLHISGHK |
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