Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s9000_g19061
Locus habu1_scaffold9000 : 232146 ... 243114 : +
To GenomeBrowser habu1_scaffold9000:232146..243114
Genes list of scaffold habu1_scaffold9000

Annotation by Blast2GO
Annotation GO
mapk mak mrk overlapping kinase isoform x1 EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s9000_g19061.t2 1 1 Pkinase 4 285 0.0 223.7 0.0 0.0 223.4
habu1_s9000_g19061.t2 1 1 Pkinase_Tyr 7 199 1.0e-30 106.7 5.0e-34 1.5e-30 106.1

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.4
Venom grand-1 1.3
Pit, infrared sensing 4.5
Nose 22.1
Brain-1 4.1
Eye 2.3
fetal fibroblast 5.9
venom gland-2 0.8
Brain-2 4.4
Spleen 0.6
Lung 4.6
Liver 0.4
Kidney 2.4
Pancreas 0.5
Small intestine 0.4
Large intestine 0.8
Stomach 0.5
heart 2.5
ovary 4.2
cheek muscle 0.8

Transcript
Transcript IDhabu1_s9000_g19061.t1
Definition-
>habu1_s9000_g19061.t1
ccggactttggacatgcctgccctaagatatgctaaattgtatgtaaatataaaaataatccattttaatgatagtgata
ttatttaagcacaatatatgtataatttatatctagtgaagtgaaaacaaaaaacgtgggtttctaaaaaactaaactaa
aacttacacaatttttatcctgcagattattttaagtggatgataagtatgtgagatgtagttgatagaaagcacttaaa
tgttattttagcaaacacaagcagaatttctcatataattctcaagaataaattgtactggtttaatcctttcccagtgc
atagagatgaaccttaattttaaacaactatagtgataatatgggaattacctggaagacatattgtttatctggggagg
aaacaaaatacaaaacaattggtaaaattggagagggaacattttctgatgttctgaaggtacagagtctaaacaatgga
cgttactatgcttgtaaacaaatgaaacagcattttgaaagtattgaccatgtgaataacctgagagaaattcaagcatt
aaggcgattgaatccacatccaaatatccttacattgcatgaagtgatttttgacaagaaagctggtgctgttgcattaa
tatgtgaacttatggacatgaatatttatgaattgatcaaaggaaggaaaaaaccattgtctgaaaagaaaacaatgaat
tatatgtaccagctatgcaaatctcttgatcatatacacaggaatggaatatttcacagagatgtgaaacctgaaaacat
attaataaagcaagatcttctcaaacttggagattttggatcctgtaggagcatacattctaagcagccatatacagaat
atatctctacacgctggtatagggcacctgaatgtcttcttacagatggttactacagttataaaatggacatctggagt
gctggctgtgtgttttatgaaattgcaagtttccacccactttttcctggatcaaatgaactggatcaaatatcaaaaat
ccatgatatcataggtacccctccaaagaagattcttaataagttcaaacagtcaagagtgatgagttttgatttcccca
tcagaaaaggcaaaggaatctctccatttatccctaacctgtccaataagagcctgacacttatgtatgcaatgatacag
tatgatcctgatgagagaatatgtgcgcatgaagcactgcaacacccttatttcagagaattgaggttggcagagaaaca
agctttaaccctacaccgaaaaatgagattagcagcaaatccattagaaagggattctcttggcttgcggcgtgtttcaa
aggaggatcaaaggcagaacttttttaggcaagcccaggagaatccactgggacatcaaggactacccaatgcagttgag
ttgccaaaactgacagttcctgctgtaaccaacttgacttcttaccctaatccttcatttcagtcagtttttaccctccc
agcatccaacagacaagtccaggttttgcaacctataacatattttgggacacatcgcaagtctgaaaaacagaaggaat
ttaaatctcctatgaaacagtaccatctgcctgctctggaaagaagaggtggaggattttgatggattaaaaactcttac
gagctgtctggattttttgaaacaatacacaaatggcaatagtgccttatcacctcaaatgctgcaacaactgctacaac
aatccttctttgggacttacccattttttttttacaaatcaacaatgtaaccaccatttttatagctcagaatgcacttt
gatttttttaaggagtttgtgcttttttatttacattttttttatttacgttttaaggtgatcatatatttaatggtgtt
gcactggcaggagtgaattgttccaacttttatattaaatgctacattgtgtttatatatatatatatgtaataaaagtg
aatttctgggaggggagttatacatgtgatcgtagggataatcagagccaatcttctttaattatcatttagaaatgtca
aaatttaaatataacctagtataaacatttgtgttctgaaacaagtactataaattagcaggtctttgtatgggtggtgg
atgaaaaagatcaatagtcaatacacaatattctcttgtatggaaatctataagtaagcttttggttaatgtatattgtc
accctggcatagttcaatgtagaatgttatacatttcttttgaaaaggccatgatgtttgaaactcttgtgctgtagaga
ataatccactcttctaaagggcatttaatttagcttttatagaggtatcagtaaaaataaatgtattaaaggactaagaa
gat
Transcript IDhabu1_s9000_g19061.t2
Definition-
>habu1_s9000_g19061.t2
ccggactttggacatgcctgccctaagatatgctaaattgtatgtaaatataaaaataatccattttaatgatagtgata
ttatttaagcacaatatatgtataatttatatctagtgaagtgaaaacaaaaaacgtgggtttctaaaaaactaaactaa
aacttacacaatttttatcctgcagattattttaagtggatgataaaatacaaaacaattggtaaaattggagagggaac
attttctgatgttctgaaggtacagagtctaaacaatggacgttactatgcttgtaaacaaatgaaacagcattttgaaa
gtattgaccatgtgaataacctgagagaaattcaagcattaaggcgattgaatccacatccaaatatccttacattgcat
gaagtgatttttgacaagaaagctggtgctgttgcattaatatgtgaacttatggacatgaatatttatgaattgatcaa
aggaaggaaaaaaccattgtctgaaaagaaaacaatgaattatatgtaccagctatgcaaatctcttgatcatatacaca
ggaatggaatatttcacagagatgtgaaacctgaaaacatattaataaagcaagatcttctcaaacttggagattttgga
tcctgtaggagcatacattctaagcagccatatacagaatatatctctacacgctggtatagggcacctgaatgtcttct
tacagatggttactacagttataaaatggacatctggagtgctggctgtgtgttttatgaaattgcaagtttccacccac
tttttcctggatcaaatgaactggatcaaatatcaaaaatccatgatatcataggtacccctccaaagaagattcttaat
aagttcaaacagtcaagagtgatgagttttgatttccccatcagaaaaggcaaaggaatctctccatttatccctaacct
gtccaataagagcctgacacttatgtatgcaatgatacagtatgatcctgatgagagaatatgtgcgcatgaagcactgc
aacacccttatttcagagaattgaggttggcagagaaacaagctttaaccctacaccgaaaaatgagattagcagcaaat
ccattagaaagggattctcttggcttgcggcgtgtttcaaaggaggatcaaaggcagaacttttttaggcaagcccagga
gaatccactgggacatcaaggactacccaatgcagttgagttgccaaaactgacagttcctgctgtaaccaacttgactt
cttaccctaatccttcatttcagtcagtttttaccctcccagcatccaacagacaagtccaggttttgcaacctataaca
tattttgggacacatcgcaagtctgaaaaacagaaggaatttaaatctcctatgaaacagtaccatctgcctgctctgga
aagaagaggtggaggattttgatggattaaaaactcttacgagctgtctggattttttgaaacaatacacaaatggcaat
agtgccttatcacctcaaatgctgcaacaactgctacaacaatccttctttgggacttacccattttttttttacaaatc
aacaatgtaaccaccatttttatagctcagaatgcactttgatttttttaaggagtttgtgcttttttatttacattttt
tttatttacgttttaaggtgatcatatatttaatggtgttgcactggcaggagtgaattgttccaacttttatattaaat
gctacattgtgtttatatatatatatatgtaataaaagtgaatttctgggaggggagttatacatgtgatcgtagggata
atcagagccaatcttctttaattatcatttagaaatgtcaaaatttaaatataacctagtataaacatttgtgttctgaa
acaagtactataaattagcaggtctttgtatgggtggtggatgaaaaagatcaatagtcaatacacaatattctcttgta
tggaaatctataagtaagcttttggttaatgtatattgtcaccctggcatagttcaatgtagaatgttatacatttcttt
tgaaaaggccatgatgtttgaaactcttgtgctgtagagaataatccactcttctaaagggcatttaatttagcttttat
agaggtatcagtaaaaataaatgtattaaaggactaagaagat

Protein
Protein IDhabu1_s9000_g19061.t1
Definition-
>habu1_s9000_g19061.t1
MGITWKTYCLSGEETKYKTIGKIGEGTFSDVLKVQSLNNGRYYACKQMKQHFESIDHVNNLREIQALRRLNPHPNILTLH
EVIFDKKAGAVALICELMDMNIYELIKGRKKPLSEKKTMNYMYQLCKSLDHIHRNGIFHRDVKPENILIKQDLLKLGDFG
SCRSIHSKQPYTEYISTRWYRAPECLLTDGYYSYKMDIWSAGCVFYEIASFHPLFPGSNELDQISKIHDIIGTPPKKILN
KFKQSRVMSFDFPIRKGKGISPFIPNLSNKSLTLMYAMIQYDPDERICAHEALQHPYFRELRLAEKQALTLHRKMRLAAN
PLERDSLGLRRVSKEDQRQNFFRQAQENPLGHQGLPNAVELPKLTVPAVTNLTSYPNPSFQSVFTLPASNRQVQVLQPIT
YFGTHRKSEKQKEFKSPMKQYHLPALERRGGGF
Protein IDhabu1_s9000_g19061.t2
Definition-
>habu1_s9000_g19061.t2
MIKYKTIGKIGEGTFSDVLKVQSLNNGRYYACKQMKQHFESIDHVNNLREIQALRRLNPHPNILTLHEVIFDKKAGAVAL
ICELMDMNIYELIKGRKKPLSEKKTMNYMYQLCKSLDHIHRNGIFHRDVKPENILIKQDLLKLGDFGSCRSIHSKQPYTE
YISTRWYRAPECLLTDGYYSYKMDIWSAGCVFYEIASFHPLFPGSNELDQISKIHDIIGTPPKKILNKFKQSRVMSFDFP
IRKGKGISPFIPNLSNKSLTLMYAMIQYDPDERICAHEALQHPYFRELRLAEKQALTLHRKMRLAANPLERDSLGLRRVS
KEDQRQNFFRQAQENPLGHQGLPNAVELPKLTVPAVTNLTSYPNPSFQSVFTLPASNRQVQVLQPITYFGTHRKSEKQKE
FKSPMKQYHLPALERRGGGF

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