Gene
| Gene Model ID | habu1_s9000_g19062 |
|---|---|
| Locus | habu1_scaffold9000 : 246219 ... 299205 : - |
| To GenomeBrowser | habu1_scaffold9000:246219..299205 |
| Genes list of scaffold | habu1_scaffold9000 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9000_g19062.t1 | 2 | 1 | WD40 | 229 | 253 | 2.1e-14 | 52.7 | 6.9e-06 | 0.034 | 14.0 |
| habu1_s9000_g19062.t1 | 2 | 2 | WD40 | 271 | 295 | 2.1e-14 | 52.7 | 1.5e-09 | 7.5e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9000_g19062.t1 | gi|602663540|ref|XP_007437400.1| | PREDICTED: WD repeat-containing protein 20 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s9000_g19062.t1 | gi|327278741|ref|XP_003224119.1| | PREDICTED: WD repeat-containing protein 20 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s9000_g19062.t1 | gi|558148150|ref|XP_006120046.1| | PREDICTED: WD repeat-containing protein 20 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s9000_g19062.t1 | gi|513189184|ref|XP_003641482.2| | PREDICTED: WD repeat-containing protein 20 isoform X1 [Gallus gallus] | 0.0 |
| habu1_s9000_g19062.t1 | gi|729770008|ref|XP_010582260.1| | PREDICTED: WD repeat-containing protein 20 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 1.3 |
| Nose | 1.7 |
| Brain-1 | 1.7 |
| Eye | 1.8 |
| fetal fibroblast | 1.7 |
| venom gland-2 | 3.5 |
| Brain-2 | 2.0 |
| Spleen | 2.1 |
| Lung | 1.9 |
| Liver | 1.9 |
| Kidney | 2.1 |
| Pancreas | 3.3 |
| Small intestine | 2.4 |
| Large intestine | 2.3 |
| Stomach | 2.2 |
| heart | 2.0 |
| ovary | 11.5 |
| cheek muscle | 3.7 |
Transcript
| Transcript ID | habu1_s9000_g19062.t1 |
|---|---|
| Definition | - |
>habu1_s9000_g19062.t1 gcggtaaacagggaaaggcttcgctcctcccacttcatggcacgaacgtttcgccagcttcccttcatgcgctttcaggc aggagaaacaatttccctctttggtgcgtctgcgcgctggcctttcatccgggtactggaagacgatgaatgctcctttc caagatggcggcggagggaggagggaaggagatgaacgagattaagacccagtttaccacccgcgaggggctctacaagc tcctgagccactcggagtacagccggcccaaccgggtgcctttcaattcgcagggctccaaccccgttcgtgtctccttc gtcaacgtcaacgaccagagtggcaatggggaccggctctgcttcaatgtgggccgggagctttacttctacatttacaa gggggtccgcaaggctgctgatttgagtaaaccaatagataaaagaatatacaaaggaacgcaacctacatgtcatgact tcaatcacttaacagccacagcagaaagtgtttctcttctagtgggcttctctgcaggacaggtgcagctaatagatcct attaaaaaagaaactagcaagctatttaatgaagaaaggctaatagacaagtccagagtaacttgtgtaaaatgggtgcc tggttcagaaagtctcttcctagtagctcattccagcggcaatatgtacttatataatgtagaacacaactgtggtacca cagctccacactatcagctacttaaacaaggagaaagttttgcagtccatacgtgcaaaagcaaatctacacgaaaccct ttacttaaatggacagtaggtgaaggtgccctaaatgaatttggtttttctccagatggaaaattcttggcatgtgtaag tcaggatggctttcttcgtgtatttaactttgattcagttgagttgcatggtacaatgaaaagctactttggaggactgc tgtgtgcatgttggagcccagatggaaaatatattgtaacaggtggagaagatgatttggtgactgtctggtcttttgtg gactgtcgagtgatagctagaggccatggacacaaatcatgggtcagtgttgtggcctttgatccatatacaaccagtgt agaagaaaatgatccaatggaattcagcggcagtgatgaggacttccaagacctcctccattttggacgagatcgagcaa atagtacgcagtcaagattatcaaaaaggaactctacagagagtcgccctgtaagtgtaacatataggtttggttcagta ggtcaggacacacagctatgtttatgggatctaacagaagacatcctcttcccacaccagcccctctcaagagcaaggac acatacaaatgtcatgactgccacaagtccccccacaggaagtggtggagctaacccaggaagtaatggaaatagcatca caacacctggaaactctgtaccccctcctcttccacgttccaatagccttccacattctgcagtttccaattctggcagc aaaagcagtgtcatggatggtgccattgcctctggtgttagtaagtttgcaaccttatcattacatgaccggaaggaaaa acaccatgaaaaagatcataagcgaaatcatagtatgggacatatatctagtaagagcagtgacaaactgaatctagtta ctaaaaccaaaacagacccagcaaaaactttgggaacgcctctgtgccccagaatggaagatgttcctttgttagagcct cttatctgtaaaaagatagcacatgaaagactgactgtgttaatttttcttgaagactgtatagtcactgcttgtcagga gggatttatttgcacatgggcaaggcctggtaaagtgggtgttttgccatcccaaaaccaggccaattctccaagtggaa ctgtagtatagccatcacactcctcctagcaaacctttgaacacagaacaagaagtaatgacaatggaaccaggagctgc tgttcagccagagagcatcacaaattcttaaaaggcagagtgttatgtgaatcacatagtgttttacaaaataattctgt aatgagttatatttttacatctaatactttgaggctgctcacctaaggaagaattttgcttaaaaatgcttcttttggtg ctacaattaaaaatagcaattgctttatatttctcagtgtaatttaatcacatacctacatccacacacatccacacgtg taaaataaaatatttcttaaatccaagtaagtttaatggtgttataaattagaatattactgttgagttttttctttgca ctgcttttttaaaatcggagatggttaacctgaaaagctctcatgggaaattaaagtcattactttctggcttcacaaat gtaattcagaaagatggatgctacaatcataggtttttctaaaaaggttgtttgcacttaaatagcgtaatgctagtgga taattaattttaaattgggtgtttgggcaccctctaaagttatgttataaagaaataaatcctttgtatcaaacatttta ttttaataatgtttcaactacagtcaatctgtattatatatgtaaataatgtaattcagtgattgggaaaatcattacac tagtaattttaatcatttaaggaagtatttctaattcagaaaatacatattattaaactatcttgaatatgcagttttgt ttattttctgtttaaatcacctttgatgtaactttttgaatgtaatatttttggtatgatatgatttaaattcttgtaga agatgttatttctgaaaaacactcaggtcagacttaggagatattgaattgggcttttgttagtaggtgttattttcctg cactttattctaaatggcttttcctcagtatggtttagaacactacaaagttcttaagcctagtttttaaaatatatgtt aattaacagtggtagtcaccattttcatgcattgggacactataatttaatatctgttaatgtgattagaaacactaaaa tgtttatttaaaattattgtaacaacaataggttgccactgtagaataatgtgccaaagtacatagttctcctgtttcaa ttaaaaatggatgccttgttggaggataaatatgaaagtctacataattaaattgctgcttggttagttactattaaact aattttgaacacgctgaaatctgaagaatccccttcagttttttttcttgaagaaaacgctgtctgcttgatactagaat tatgtggccaaggattcctctctggaaattagatcaagaggtagaaattcccagattcttgtcaaaattgtatcagcatt tcagcaattatgaggccagccctgcccttttcttgtaggactgcagcctcaggatgcacatagggaaaaaaagcagagct tgcattgcaaccattcagtgctgctttcttcacatccttcctcccacccctgccagctctctcaaaagccctggtgttgg gtttttttttcccttggactgattatttgatggcagttctgaagcagaagaactggggaagcaaatagcttattgaattg tggttgcaacgtagtgtctcctcactttctggatatggaaagaaaacgctgagtgctaaaggctacaattcacagaacac tttttgataaataatgttctatttcaaggttgtagattttatgtatatgaatgtttgtgcagataatcctgctatttgct ggatttccacagttccatatttttaaccctgccccttacactctttgaaacagagtttcagtagtatctgcaatacatta ccatccattgcactgcatataagccctttgacatactccaaagtgcgtttgggcttatagtaaatacttttaaaatcagt tcgaaataactaaatagtgttgggctatttttgactgcataatacaaaccgctagtgaaagcacagaataaaagtgccgt tttaactactgtgc |
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Protein
| Protein ID | habu1_s9000_g19062.t1 |
|---|---|
| Definition | - |
>habu1_s9000_g19062.t1 MLLSKMAAEGGGKEMNEIKTQFTTREGLYKLLSHSEYSRPNRVPFNSQGSNPVRVSFVNVNDQSGNGDRLCFNVGRELYF YIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCV KWVPGSESLFLVAHSSGNMYLYNVEHNCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFGFSPDGKFL ACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCACWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPY TTSVEENDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTESRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLS RARTHTNVMTATSPPTGSGGANPGSNGNSITTPGNSVPPPLPRSNSLPHSAVSNSGSKSSVMDGAIASGVSKFATLSLHD RKEKHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVT ACQEGFICTWARPGKVGVLPSQNQANSPSGTVV |
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