Gene
| Gene Model ID | habu1_s9114_g19163 |
|---|---|
| Locus | habu1_scaffold9114 : 112436 ... 146083 : + |
| To GenomeBrowser | habu1_scaffold9114:112436..146083 |
| Genes list of scaffold | habu1_scaffold9114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9114_g19163.t1 | 1 | 1 | DUF4200 | 112 | 229 | 3.9e-11 | 42.9 | 2.6e-15 | 3.9e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9114_g19163.t1 | gi|637301970|ref|XP_008109088.1| | PREDICTED: coiled-coil domain-containing protein 38 [Anolis carolinensis] | 0.0 |
| habu1_s9114_g19163.t1 | gi|557299204|ref|XP_006031846.1| | PREDICTED: coiled-coil domain-containing protein 38 [Alligator sinensis] | 0.0 |
| habu1_s9114_g19163.t1 | gi|697482021|ref|XP_009672828.1| | PREDICTED: coiled-coil domain-containing protein 38 isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s9114_g19163.t1 | gi|697482025|ref|XP_009672830.1| | PREDICTED: coiled-coil domain-containing protein 38 isoform X2 [Struthio camelus australis] | 0.0 |
| habu1_s9114_g19163.t1 | gi|402887290|ref|XP_003907029.1| | PREDICTED: coiled-coil domain-containing protein 38 [Papio anubis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 2.3 |
| Pit, infrared sensing | 2.0 |
| Nose | 1.3 |
| Brain-1 | 1.5 |
| Eye | 1.4 |
| fetal fibroblast | 1.4 |
| venom gland-2 | 2.2 |
| Brain-2 | 2.9 |
| Spleen | 6.5 |
| Lung | 3.6 |
| Liver | 26.8 |
| Kidney | 11.5 |
| Pancreas | 25.3 |
| Small intestine | 4.0 |
| Large intestine | 3.2 |
| Stomach | 2.3 |
| heart | 1.9 |
| ovary | 2.3 |
| cheek muscle | 3.6 |
Transcript
| Transcript ID | habu1_s9114_g19163.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19163.t1 gtcgcggcattaaaaaggttgagaaccactgcactaggtcaaatcagtcttggagaaagacattccgtgtatgcaggatt tctggatgaaaccatgtttagtcattttagtaaacccttccactttgctaagtcactaaacggtattgaataaatttaaa ctacagatagtcttcagtaaatggcgatctaagaagaattttatggtgtgaaaatggcatcaacaagtgttacacgtagt ccttttgtggaactagatgaagaatacaggcaaaaaaatccttttgaaaagatgaacactgaaatctacctttacagaga tattgaatgcacagagaaagaaattattagaaaaactaaacagaatctgaaggcatatgaaaggagcaccatttcatcaa gagcccggtgtcgaaaggctttgagaaaactagaagaagtcactgaacaagaaacaacagaaacaatgggaaaagatgtt cctgctctgaattgggctcttgcttttgcaaagtgttgtcaaagtgacaaacagtctatagcagattacatcagtgaaga gaaggagctatttctattggagtactctgttaaaataaaacagcgcaccatggcaaagctggagaagatggcagcaaggg aagagaggagggccagaatggctgaagcaaaattagaagaagataccttggcatttgaggagtttctcagagcaaatgat aagagctctgtagaggcccttaaattggcaactcaagaagcaaaatacaaaatggaagtaacaacagaactgaggacagc aatgaatgaactgttctcccttaaaagtgaaattgcaaacactgaagaccttttgaagatgtatttatcctatgaagcct ttttgtttagtatttctcccaaagcttggcaagagcagcagatggcaaagaggaagaaagatcggaaaaaaagcccatca aaatcccttatttctttctcaccagctgtggataaagccaaactaatctcagcctccattgtattacaaaataaaataag caaaatagcacatcataaagggccacaaccagccaaaaaagtgacagtagacaaatcagcatcagtcatcttaagcaatc ctgaggaaaaggcacaagtttcaaataaccaaggagactacaggttctttagaaagtcatcacaagtagtactggacccc aaaatattcgtagatgataaaaatatatcatcagaaagtggtttaagtgaaaccagcttctctctatcttcagaagacaa ttttaacttggatgatatccagaattgtgacaaagagccagagatttatttcaaagacacagaagagttacttcagatgt tcagatatcttgaagagcaaaatctttcattattccaaaacattcaagatattagtggcacattggaagaaagccagcag agagagaaaatagttaagcagcatatggaacaaaaggtaaagcgccttagagacaaaaaagaagctctgatagcttcttg cctcaaagaagatgggaaaagtgctgaactggcgttaaaagcgaaaatgttttcttcaggagaatataatccagcatcca tgaataaaatactggattcgcttactaaaaaagtagcagaagtatacaaagtttgctgtgggacacaggaagtatccagc atgaactcattccaaatgctaaaaaaaatagaaatgcgagtttcagaactctgtgagatgttcgatatacttccaaaaga gtatcttgagatcattgaagtcaccgaaaagctcagagcaaaagaaagacgacaaaagatacgtgaagacaaattgaaag aacttagaagaattcaggaagaacggctgaagcttgctcttgagagagcaattgcagaaccaaagaaaaggatgggaaga aaactagtgtaccggtcacagcctccaacgactaagcacgaagcagaacaagctgcagatgcaactacaaaaagtgaaga tgattactacttcacttgatatttttgcgtaaggtgtatttttgtactaggtatagatcttcctcctagcttagtccaac tgaatcatataaagtaaatggtgagggaataagtc |
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Protein
| Protein ID | habu1_s9114_g19163.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19163.t1 MASTSVTRSPFVELDEEYRQKNPFEKMNTEIYLYRDIECTEKEIIRKTKQNLKAYERSTISSRARCRKALRKLEEVTEQE TTETMGKDVPALNWALAFAKCCQSDKQSIADYISEEKELFLLEYSVKIKQRTMAKLEKMAAREERRARMAEAKLEEDTLA FEEFLRANDKSSVEALKLATQEAKYKMEVTTELRTAMNELFSLKSEIANTEDLLKMYLSYEAFLFSISPKAWQEQQMAKR KKDRKKSPSKSLISFSPAVDKAKLISASIVLQNKISKIAHHKGPQPAKKVTVDKSASVILSNPEEKAQVSNNQGDYRFFR KSSQVVLDPKIFVDDKNISSESGLSETSFSLSSEDNFNLDDIQNCDKEPEIYFKDTEELLQMFRYLEEQNLSLFQNIQDI SGTLEESQQREKIVKQHMEQKVKRLRDKKEALIASCLKEDGKSAELALKAKMFSSGEYNPASMNKILDSLTKKVAEVYKV CCGTQEVSSMNSFQMLKKIEMRVSELCEMFDILPKEYLEIIEVTEKLRAKERRQKIREDKLKELRRIQEERLKLALERAI AEPKKRMGRKLVYRSQPPTTKHEAEQAADATTKSEDDYYFT |
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