Gene
| Gene Model ID | habu1_s9114_g19165 |
|---|---|
| Locus | habu1_scaffold9114 : 222696 ... 239972 : + |
| To GenomeBrowser | habu1_scaffold9114:222696..239972 |
| Genes list of scaffold | habu1_scaffold9114 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 44-a-like isoform x1 | GO:0004843 GO:0005634 GO:0008270 GO:0016579 GO:0060564 GO:0090231 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9114_g19165.t3 | 1 | 1 | zf-UBP | 26 | 87 | 5.5e-21 | 74.4 | 1.1e-24 | 5.5e-21 | 74.4 |
| habu1_s9114_g19165.t3 | 1 | 1 | UCH | 266 | 672 | 0.0 | 206.9 | 0.0 | 0.0 | 206.9 |
| habu1_s9114_g19165.t3 | 2 | 1 | UCH_1 | 268 | 299 | 5.3e-17 | 62.1 | 7.3e-06 | 0.036 | 13.5 |
| habu1_s9114_g19165.t3 | 2 | 2 | UCH_1 | 376 | 640 | 5.3e-17 | 62.1 | 7.5e-17 | 3.7e-13 | 49.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9114_g19165.t3 | gi|591349485|ref|XP_007069287.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-A-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.5 |
| Venom grand-1 | 6.8 |
| Pit, infrared sensing | 3.7 |
| Nose | 5.9 |
| Brain-1 | 2.4 |
| Eye | 4.7 |
| fetal fibroblast | 5.4 |
| venom gland-2 | 7.1 |
| Brain-2 | 2.4 |
| Spleen | 6.0 |
| Lung | 3.9 |
| Liver | 4.2 |
| Kidney | 4.6 |
| Pancreas | 6.4 |
| Small intestine | 7.4 |
| Large intestine | 7.5 |
| Stomach | 6.1 |
| heart | 4.0 |
| ovary | 49.7 |
| cheek muscle | 8.5 |
Transcript
| Transcript ID | habu1_s9114_g19165.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19165.t1 gaccgagaagctgagtggcttcggccaccgacatgactcgggccggtcgggcgaaaatgcaaaacctaagaaactgttgg gctgatgaatttctatagtatattctcaacattgtgagattgacaatggataaatgtaagcatgtaggccgactgcggct tgcccaggaccattcaattgtgaatcctcacaaatggcattgtatggtatgcaatactacagaatctgtatgggcctgtc tcagttgctctcatgttgcttgtggaagatatattgaagaacatgcactaaagcactttcaggaaagcaatcatccagta gcattggaagtaaatgagctgtacattttttgctacctttgtgatgattatgttcttaatgataacgcaactggtgacat aaaacttttacgaagtatattaagtgcaatcaagagccagaattatgactgtactactcggagtggtaggattttgcgat ctatgggcataagcgatgatctttcacataataatgctcaggctttgcttcgaagtcaagaccgtatgttcacagccctg tggcacaggaggcatgcattaatgggcaaagtatttagaacttggtttgaactaacaccaactgggaaaaggattttaga agaagataagctgtgtgaacaggcagaagaaagacgagtcaatgctaggaagaaaagagaagagcggaaacgtcaattga aggaggaaatggaaaaaataccaccaaggaaaagctttcgcttgcaaaaacaaaacaaagaatcttcagtctgtgcacta aaaatgccacaaaatttgggctctgatatagagctgaaagtaacagctacctcagatgatgcaaagttaaaaaaaattaa tgactctccagccaaacgaagatctactatgactcctggtgtgacaggactacgaaacttgggaaatacttgctatatga actctattcttcaggtattgagtcatttgttcatatttagggaatgttttttaaagcttgatttaaaccaaacacaagag ttgttagcaattggagccagtggcaaaacaagatcatctacaaagcagcctctgtctgctacctttgatgttcaagaaca caaaacctttgttaagcaccagacattttctgcaaggcgatttagtacatcatctggtttaagtggtggtggatcaagta atagaaatatggaacttattcagcccaaggaaccaagttcaaagtacatttctctttgtcatgaattacatactttgttt caagttatgtggtctggcaagtgggcattggtgtctccttttgccatgctccattctgtgtggagactaatcccagcctt ccatggttatgcccaacaagatgctcaggaatttctttgtgaacttttggataaagtccaacaagaattggagacagtta gagcaaaaagcccgaccctcattccagcttctcaaaggaaactcattaaaaaagttttgaatgtggtcaacactattttt catggacagcttttaagtcaggtaacatgccttgcatgtgacaacaaatcaaatactgtagagcctttctgggacttgtc attggaatttcctgaaagataccactgcaatgggagagagacaacctgtcagtatccatgcttgttgacagagatgttgg ccaaatttacagaaactgaagctttagaagggaagatatatgcctgtaaccagtgcaacacaaaacgaagaaaattttct tctaaacctgttctactcacagaggcacagaagcagcttctggtgtgccatctacctcagattctgcggttacaccttaa gcgattcagatggtcaggacgcaatcatcgtgagaagattggtgtgcatgtcaattttgatgagatactaaacatggaac cctattgttgcagaaaatctctaaaatcccttatggcagattactttatttatgatttgtctgctgttgtgatgcatcat gggaaaggatttggttcaggacactacactgcctattgctataattcagatggagggttctgggtacactgcaatgattc caagctcaccatgtgcactatggaagaagtatgcaaggcccaggcatatattttgttttatacccaacgagttactttaa tgaatggacattggagaatgtcaagtcttgattcaccatctggaaaacaggcaaatactgaagttaatggctccaatgtg aaaagtaacagctaattcaaagccaaattgctatgtacaggataagtctgaattgtcacttgcgcatgtatttaggcaag taagcgcaataatgtactaaatctgctttctggagccaaactttattacatgttcagatcttttataccttttaaactca ttcatgacagtaacttcccaagttactagtatatatatatatgcggttatatatatatatatagctattgttaagagaaa atcttccatttgaatctttaaattttacctcaagctgtttttcagcaatttagtattttgaagtaggaaacttagatgag gaatatgggtgggcaaactctagactatttttaaattaaaagctgtgttttatactagtact |
|
| Transcript ID | habu1_s9114_g19165.t2 |
| Definition | - |
>habu1_s9114_g19165.t2 gaccgagaagctgagtggcttcggccaccgacatgactcgggccggtcgggcgaaaatgcaaaacctaagaaactgttgg gctgatgaatttctatagtatattctcaacattgtgagattgacaatggataaatgtaagcatgtaggccgactgcggct tgcccaggaccattcaattgtgaatcctcacaaatggcattgtatggtatgcaatactacagaatctgtatgggcctgtc tcagttgctctcatgttgcttgtggaagatatattgaagaacatgcactaaagcactttcaggaaagcaatcatccagta gcattggaagtaaatgagctgtacattttttgctacctttgtgatgattatgttcttaatgataacgcaactggtgacat aaaacttttacgaagtatattaagtgcaatcaagagccagaattatgactgtactactcggagtggtaggattttgcgat ctatgggcataagcgatgatctttcacataataatgctcaggctttgcttcgaagtcaagaccgtatgttcacagccctg tggcacaggaggcatgcattaatgggcaaagtatttagaacttggtttgaactaacaccaactgggaaaaggattttaga agaagataagctgtgtgaacaggcagaagaaagacgagtcaatgctaggaagaaaagagaagagcggaaacgtcaattga aggaggaaatggaaaaaataccaccaaggaaaagctttcgcttgcaaaaacaaaacaaagaatcttcagtctgtgcacta aaaatgccacaaaatttgggctctgatatagagctgaaagtaacagctacctcagatgatgcaaagttaaaaaaaattaa tgactctccagccaaacgaagatctactatgactcctggtgtgacaggactacgaaacttgggaaatacttgctatatga actctattcttcaggtattgagtcatttgttcatatttagggaatgttttttaaagcttgatttaaaccaaacacaagag ttgttagcaattggagccagtggcaaaacaagatcatctacaaagcagcctctgtctgctacctttgatgttcaagaaca caaaacctttgttaagcaccagacattttctgcaaggcgatttagtacatcatctggtttaagtggtggtggatcaagta atagaaatatggaacttattcagcccaaggaaccaagttcaaagtacatttctctttgtcatgaattacatactttgttt caagttatgtggtctggcaagtgggcattggtgtctccttttgccatgctccattctgtgtggagactaatcccagcctt ccatggttatgcccaacaagatgctcaggaatttctttgtgaacttttggataaagtccaacaagaattggagacagtta gagcaaaaagcccgaccctcattccagcttctcaaaggaaactcattaaaaaagttttgaatgtggtcaacactattttt catggacagcttttaagtcaggtaacatgccttgcatgtgacaacaaatcaaatactgtagagcctttctgggacttgtc attggaatttcctgaaagataccactgcaatgggagagagacaacctgtcagtatccatgcttgttgacagagatgttgg ccaaatttacagaaactgaagctttagaagggaagatatatgcctgtaaccagtgcaacaaggcacagaagcagcttctg gtgtgccatctacctcagattctgcggttacaccttaagcgattcagatggtcaggacgcaatcatcgtgagaagattgg tgtgcatgtcaattttgatgagatactaaacatggaaccctattgttgcagaaaatctctaaaatcccttatggcagatt actttatttatgatttgtctgctgttgtgatgcatcatgggaaaggatttggttcaggacactacactgcctattgctat aattcagatggagggttctgggtacactgcaatgattccaagctcaccatgtgcactatggaagaagtatgcaaggccca ggcatatattttgttttatacccaacgagttactttaatgaatggacattggagaatgtcaagtcttgattcaccatctg gaaaacaggcaaatactgaagttaatggctccaatgtgaaaagtaacagctaattcaaagccaaattgctatgtacagga taagtctgaattgtcacttgcgcatgtatttaggcaagtaagcgcaataatgtactaaatctgctttctggagccaaact ttattacatgttcagatcttttataccttttaaactcattcatgacagtaacttcccaagttactagtatatatatatat gcggttatatatatatatatagctattgttaagagaaaatcttccatttgaatctttaaattttacctcaagctgttttt cagcaatttagtattttgaagtaggaaacttagatgaggaatatgggtgggcaaactctagactatttttaaattaaaag ctgtgttttatactagtact |
|
| Transcript ID | habu1_s9114_g19165.t3 |
| Definition | - |
>habu1_s9114_g19165.t3 gaccgagaagctgagtggcttcggccaccgacatgactcgggccggtcgggcgaaaatgcaaaacctaagaaactgttgg gctgatgaatttctatagtatattctcaacattgtgagattgacaatggataaatgtaagcatgtaggccgactgcggct tgcccaggaccattcaattgtgaatcctcacaaatggcattgtatggtatgcaatactacagaatctgtatgggcctgtc tcagttgctctcatgttgcttgtggaagatatattgaagaacatgcactaaagcactttcaggaaagcaatcatccagta gcattggaagtaaatgagctgtacattttttgctacctttgtgatgattatgttcttaatgataacgcaactggtgacat aaaacttttacgaagtatattaagtgcaatcaagagccagaattatgactgtactactcggagtggtaggattttgcgat ctatgggcataagcgatgatctttcacataataatgctcaggctttgcttcgaagtcaagaccgtatgttcacagccctg tggcacaggaggcatgcattaatgggcaaagtatttagaacttggtttgaactaacaccaactgggaaaaggattttaga agaagataagctgtgtgaacaggcagaagaaagacgagtcaatgctaggaagaaaagagaagagcggaaacgtcaattga aggaggaaatggaaaaaataccaccaaggaaaagctttcgcttgcaaaaacaaaacaaagaatcttcagtctgtgcacta aaaatgccacaaaatttgggctctgatatagagctgaaagtaacagctacctcagatgatgcaaagttaaaaaaaattaa tgactctccagccaaacgaagatctactatgactcctggtgtgacaggactacgaaacttgggaaatacttgctatatga actctattcttcaggtattgagtcatttgttcatatttagggaatgttttttaaagcttgatttaaaccaaacacaagag ttgttagcaattggagccagtggcaaaacaagatcatctacaaagcagcctctgtctgctacctttgatgttcaagaaca caaaacctttgttaagcaccagacattttctgcaaggcgatttagtacatcatctggtttaagtggtggtggatcaagta atagaaatatggaacttattcagcccaaggaaccaagttcaaagtacatttctctttgtcatgaattacatactttgttt caagttatgtggtctggcaagtgggcattggtgtctccttttgccatgctccattctgtgtggagactaatcccagcctt ccatggttatgcccaacaagatgctcaggaatttctttgtgaacttttggataaagtccaacaagaattggagacagtta gagcaaaaagcccgaccctcattccagcttctcaaaggaaactcattaaaaaagttttgaatgtggtcaacactattttt catggacagcttttaagtcaggtaacatgccttgcatgtgacaacaaatcaaatactgtagagcctttctgggacttgtc attggaatttcctgaaagataccactgcaatgggagagagacaacctgtcagtatccatgcttgttgacagagatgttgg ccaaatttacagaaactgaagctttagaagggaagatatatgcctgtaaccagtgcaacacaaaacgaagaaaattttct tctaaacctgttctactcacagaggcacagaagcagcttctggtgtgccatctacctcagattctgcggttacaccttaa gcgattcagatggtcaggacgcaatcatcgtgagaagattggtgtgcatgtcaattttgatgagatactaaacatggaac cctattgttgcagaaaatctctaaaatcccttatggcagattactttatttatgatttgtctgctgttgtgatgcatcat gggaaaggatttggttcaggacactacactgcctattgctataattcagatggagggttctgggtacactgcaatgattc caagctcaccatgtgcactatggaagaagtatgcaaggcccaggcatatattttgttttatacccaacgagttactttaa tgaatggacattggagaatgtcaagtcttgattcaccatctggaaaacaggcaaatactgaagttaatggctccaatgtg aaaagtaacagctaattcaaagccaaattgctatgtacaggataagtctgaattgtcacttgcgcatgtatttaggcaag taagcgcaataatgtactaaatctgctttctggagccaaactttattacatgttcagatcttttataccttttaaactca ttcatgacagtaacttcccaagttactagtatatatatatatgcggttatatatatatatatagctattgttaagagaaa atcttccatttgaatctttaaattttacctcaagctgtttttcagcaatttagtattttgaagtaggaaacttagatgag gaatatgggtgggcaaactctagactatttttaaattaaaagctgtgttttatactagtact |
|
Protein
| Protein ID | habu1_s9114_g19165.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19165.t1 MLHSVWRLIPAFHGYAQQDAQEFLCELLDKVQQELETVRAKSPTLIPASQRKLIKKVLNVVNTIFHGQLLSQVTCLACDN KSNTVEPFWDLSLEFPERYHCNGRETTCQYPCLLTEMLAKFTETEALEGKIYACNQCNTKRRKFSSKPVLLTEAQKQLLV CHLPQILRLHLKRFRWSGRNHREKIGVHVNFDEILNMEPYCCRKSLKSLMADYFIYDLSAVVMHHGKGFGSGHYTAYCYN SDGGFWVHCNDSKLTMCTMEEVCKAQAYILFYTQRVTLMNGHWRMSSLDSPSGKQANTEVNGSNVKSNS |
|
| Protein ID | habu1_s9114_g19165.t2 |
| Definition | - |
>habu1_s9114_g19165.t2 MLHSVWRLIPAFHGYAQQDAQEFLCELLDKVQQELETVRAKSPTLIPASQRKLIKKVLNVVNTIFHGQLLSQVTCLACDN KSNTVEPFWDLSLEFPERYHCNGRETTCQYPCLLTEMLAKFTETEALEGKIYACNQCNKAQKQLLVCHLPQILRLHLKRF RWSGRNHREKIGVHVNFDEILNMEPYCCRKSLKSLMADYFIYDLSAVVMHHGKGFGSGHYTAYCYNSDGGFWVHCNDSKL TMCTMEEVCKAQAYILFYTQRVTLMNGHWRMSSLDSPSGKQANTEVNGSNVKSNS |
|
| Protein ID | habu1_s9114_g19165.t3 |
| Definition | - |
>habu1_s9114_g19165.t3 MDKCKHVGRLRLAQDHSIVNPHKWHCMVCNTTESVWACLSCSHVACGRYIEEHALKHFQESNHPVALEVNELYIFCYLCD DYVLNDNATGDIKLLRSILSAIKSQNYDCTTRSGRILRSMGISDDLSHNNAQALLRSQDRMFTALWHRRHALMGKVFRTW FELTPTGKRILEEDKLCEQAEERRVNARKKREERKRQLKEEMEKIPPRKSFRLQKQNKESSVCALKMPQNLGSDIELKVT ATSDDAKLKKINDSPAKRRSTMTPGVTGLRNLGNTCYMNSILQVLSHLFIFRECFLKLDLNQTQELLAIGASGKTRSSTK QPLSATFDVQEHKTFVKHQTFSARRFSTSSGLSGGGSSNRNMELIQPKEPSSKYISLCHELHTLFQVMWSGKWALVSPFA MLHSVWRLIPAFHGYAQQDAQEFLCELLDKVQQELETVRAKSPTLIPASQRKLIKKVLNVVNTIFHGQLLSQVTCLACDN KSNTVEPFWDLSLEFPERYHCNGRETTCQYPCLLTEMLAKFTETEALEGKIYACNQCNTKRRKFSSKPVLLTEAQKQLLV CHLPQILRLHLKRFRWSGRNHREKIGVHVNFDEILNMEPYCCRKSLKSLMADYFIYDLSAVVMHHGKGFGSGHYTAYCYN SDGGFWVHCNDSKLTMCTMEEVCKAQAYILFYTQRVTLMNGHWRMSSLDSPSGKQANTEVNGSNVKSNS |
|