Gene
| Gene Model ID | habu1_s9114_g19168 |
|---|---|
| Locus | habu1_scaffold9114 : 309876 ... 336315 : + |
| To GenomeBrowser | habu1_scaffold9114:309876..336315 |
| Genes list of scaffold | habu1_scaffold9114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9114_g19168.t1 | 1 | 1 | RhoGEF | 953 | 1043 | 2.2e-14 | 53.7 | 1.6e-18 | 2.4e-14 | 53.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9114_g19168.t1 | gi|602635661|ref|XP_007424693.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 6 [Python bivittatus] | 0.0 |
| habu1_s9114_g19168.t1 | gi|637301833|ref|XP_008109059.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 6 [Anolis carolinensis] | 0.0 |
| habu1_s9114_g19168.t1 | gi|530639513|ref|XP_005306547.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 6 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s9114_g19168.t1 | gi|530639515|ref|XP_005306548.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 6 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s9114_g19168.t1 | gi|591349526|ref|XP_007069307.1| | PREDICTED: LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 3.5 |
| Pit, infrared sensing | 2.9 |
| Nose | 1.1 |
| Brain-1 | 1.0 |
| Eye | 1.3 |
| fetal fibroblast | 2.9 |
| venom gland-2 | 4.4 |
| Brain-2 | 0.8 |
| Spleen | 1.4 |
| Lung | 2.3 |
| Liver | 2.9 |
| Kidney | 4.0 |
| Pancreas | 1.8 |
| Small intestine | 7.3 |
| Large intestine | 2.1 |
| Stomach | 1.7 |
| heart | 6.4 |
| ovary | 1.6 |
| cheek muscle | 8.8 |
Transcript
| Transcript ID | habu1_s9114_g19168.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19168.t1 cggtggactttacccttgcatgcagccactctgagaagaattgctatgctttaaagagggagaaggagcggagcgaggca aaacgcatggaagggaggcgccatgagttcagcggttcagagttctttgtttcattacccaaaatagaaactaagaagcc accagttgccccaaaaccaagactggtgataggacacaaaatagtaccacctcctgtagcaccaaaaccagaagttgtgg tggtggatgttttgcagtcctcaagaaaaacaaagccagtgatagcaccaaaaccaaaggtgcttaaatgctcgactgtt cctgaagttaaaactgtccccacttccataaggagaaatttaaagactttagaagatcacaaaaaagactcttctgagta cttggttcatctgaattataaaaatgggattccaacagacaacgcggcttatattatatctctgtgttcttgcagctttg aatgcattcataaatgtggaaatagggaggatacacgcaaaaatgcaaccatttttgaacagttagaaaacctagagaac attgatatagatgaacaaccatcatctctaaaacgtgggacaatatttgaaagcaataatgaaaacaatttaaataacta caatattgtcttaaaggctaatgatatagaggaaaagcttgaagatgttatgatacaaaatgttttccctaataatggcc atttgaggcaaaaacatttaagtgaacttgaaacagttaatactattaattctaacaaaaatgttaaaatagaatttaca gacttttctccacctatattcaatattgaagaacttacggacagatcaaataatgatgcgaagttagctgctgttgaatc tgaaatgttagaagttcctcttttgactgaaaacaacaataattgtttctctttgagtaatccagcacatatggaaaaaa tggatgtggataatacatctatgataccttgcaaaaaagacagtgacaaactttcatttggaaccaactctgtaatatca actaaatcttttccaattccaaaaccaagaaagctacacactccctgtctagttcgtcaagatggcgtagatgtttcaga agaggatgaatgtggtagttctgggattcatgagtttgccattaagaatacaacaaaaattaatgttctagttcaaagtg tttcctataaaaatcaggaacataaaagtgcagtggataaatctgaagtaccttcatattctgtaagaaaagtacatcca acatcagaatctactgattccaaagaattgattccaccaagccagtcatctgaaattgtacatgaacactgtcagttctt acaaaatattgggcattcttcagaccttaattcaataaacccttccattaacataatggacgataacagtatgttggcaa ctgatgctaaagagactggctttgtaaggtgtagtaacctatcaatgagtttgcctaaacaaataaaattatcatgcaat caacctttatctgccttggtgacccttgataactctgcccaaaaaaaggatgctaaagatgcttacttaaaaggtgaaag ttcatctcgaatcattcctcagaaacctcaaagacatggcattgctgtagctgggctattgaaaaaatctgcatcagagg aactgttagacacaagtgcttacttttctagtgaaaataaaactttggaggctcctttggggggggctcggataaggcat ttctcaggcagagaagaaaatgcagtcctgttgtctgatacactaacaccacctttggaaaaaccagtttggaaattacc tcatcctattcttccattttcaggaaacccagaaaccttaaaaaacacaaaaaatgcaaaaaaagtggaaaacctcagca ctgtaacaaaacctcgagccaaatccttgtcttctgtagatatggacagaatacacaagcctccaaaagaacctcaaaag aaaagctcactaaaaaaattcctaaacatgaaatggtctgtttggatgttgaaaagtgacttccagaaatttctggcaaa gggcacacagtctacagataatgccaatgggaatattcttagcagagaagggcctggcaaaaatgggaatgcaactaccg tggcaaatggaaggaaaactaaaccggcaaaggcacattcagcagaaataggcagctttttctcacaaaagggaaaacaa aaaatcaaaggtcggaatgaaattgaaatcaatcaaagatcaaagtctttagatgaacagactttttcattacaaggaca cttgagttctcttactcaagacaacatacatgaatatgaaaatgtgagccattacgaagaaatcccagaatatgagaatt tgccttttgcagctactgataaaaaaatatgttttgacagtcaaaattctagtggtgctgaaaatcaggatgctaatatg tatgaggtggaagagctatatgaacctacagggaattgtttggagtttggcaggtcatcagcagaacgtgatggatcaga attgatgttagaagatatacattcagatgatgaaataatgccaagagacatgaacagttctgatgatgatgacgatgatg atgannnnnnnatgatgatgataccaattcagattccagtaaaggggagtctgatgcacaagaaaacaagcagttatgaa cacacggaacacatctattctgatttgattattctgattctccaatgtatagatattgaattgtttaggggatatggaag tcgtaatgagaaggaagcaaaagcagaagcagtgaaattccatttcaagttggcagatgtggggcatgtatttagatttg tatttagatttgcacaagaatcagagctggattttcgggattcagtggcacatgcttctaggcagtttggaaagccagta attgaagataagatcctgaatcagatcttgtactatctacctcagctatatgagcttaatcgggacctcctgagagaact agaagaacgcctttctcattggattgaccatcagagaattgctgatatatttgtgaaaaaggggccttatttaaagatgt attcaacatacataaaagaatttgataggaatataaccctccttgatgaacattgtaaaaagaaccctgggtttgctgct gttgttcgagaatttgag |
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Protein
| Protein ID | habu1_s9114_g19168.t1 |
|---|---|
| Definition | - |
>habu1_s9114_g19168.t1 MEGRRHEFSGSEFFVSLPKIETKKPPVAPKPRLVIGHKIVPPPVAPKPEVVVVDVLQSSRKTKPVIAPKPKVLKCSTVPE VKTVPTSIRRNLKTLEDHKKDSSEYLVHLNYKNGIPTDNAAYIISLCSCSFECIHKCGNREDTRKNATIFEQLENLENID IDEQPSSLKRGTIFESNNENNLNNYNIVLKANDIEEKLEDVMIQNVFPNNGHLRQKHLSELETVNTINSNKNVKIEFTDF SPPIFNIEELTDRSNNDAKLAAVESEMLEVPLLTENNNNCFSLSNPAHMEKMDVDNTSMIPCKKDSDKLSFGTNSVISTK SFPIPKPRKLHTPCLVRQDGVDVSEEDECGSSGIHEFAIKNTTKINVLVQSVSYKNQEHKSAVDKSEVPSYSVRKVHPTS ESTDSKELIPPSQSSEIVHEHCQFLQNIGHSSDLNSINPSINIMDDNSMLATDAKETGFVRCSNLSMSLPKQIKLSCNQP LSALVTLDNSAQKKDAKDAYLKGESSSRIIPQKPQRHGIAVAGLLKKSASEELLDTSAYFSSENKTLEAPLGGARIRHFS GREENAVLLSDTLTPPLEKPVWKLPHPILPFSGNPETLKNTKNAKKVENLSTVTKPRAKSLSSVDMDRIHKPPKEPQKKS SLKKFLNMKWSVWMLKSDFQKFLAKGTQSTDNANGNILSREGPGKNGNATTVANGRKTKPAKAHSAEIGSFFSQKGKQKI KGRNEIEINQRSKSLDEQTFSLQGHLSSLTQDNIHEYENVSHYEEIPEYENLPFAATDKKICFDSQNSSGAENQDANMYE VEELYEPTGNCLEFGRSSAERDGSELMLEDIHSDDEIMPRDMNSSDDDDDDDXXXMMMIPIQIPVKGSLMHKKTSSYEHT EHIYSDLIILILQCIDIELFRGYGSRNEKEAKAEAVKFHFKLADVGHVFRFVFRFAQESELDFRDSVAHASRQFGKPVIE DKILNQILYYLPQLYELNRDLLRELEERLSHWIDHQRIADIFVKKGPYLKMYSTYIKEFDRNITLLDEHCKKNPGFAAVV REFE |
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