Gene
| Gene Model ID | habu1_s939_g03336 |
|---|---|
| Locus | habu1_scaffold939 : 54156 ... 63278 : + |
| To GenomeBrowser | habu1_scaffold939:54156..63278 |
| Genes list of scaffold | habu1_scaffold939 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| galectin-related protein | GO:0005622 GO:0030246 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s939_g03336.t1 | 1 | 1 | Gal-bind_lectin | 39 | 169 | 5.5e-29 | 100.1 | 4.3e-33 | 6.3e-29 | 99.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s939_g03336.t1 | gi|591376539|ref|XP_007062936.1| | PREDICTED: galectin-related protein isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s939_g03336.t1 | gi|530587065|ref|XP_005287273.1| | PREDICTED: galectin-related protein [Chrysemys picta bellii] | 0.0 |
| habu1_s939_g03336.t1 | gi|327260896|ref|XP_003215269.1| | PREDICTED: galectin-related protein [Anolis carolinensis] | 0.0 |
| habu1_s939_g03336.t1 | gi|729752797|ref|XP_010573061.1| | PREDICTED: galectin-related protein [Haliaeetus leucocephalus] | 0.0 |
| habu1_s939_g03336.t1 | gi|564251859|ref|XP_006264972.1| | PREDICTED: galectin-related protein [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.1 |
| Venom grand-1 | 5.2 |
| Pit, infrared sensing | 5.1 |
| Nose | 4.9 |
| Brain-1 | 5.7 |
| Eye | 9.4 |
| fetal fibroblast | 3.3 |
| venom gland-2 | 8.2 |
| Brain-2 | 4.6 |
| Spleen | 1.3 |
| Lung | 3.9 |
| Liver | 2.1 |
| Kidney | 3.5 |
| Pancreas | 1.1 |
| Small intestine | 2.7 |
| Large intestine | 2.4 |
| Stomach | 2.4 |
| heart | 1.0 |
| ovary | 4.6 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s939_g03336.t1 |
|---|---|
| Definition | - |
>habu1_s939_g03336.t1 ttctgccctcctgcagctccccctcttcctcctccagccgatcgaggcttagcgctcgctgcaccgtctcaacaagatgg cggggtcggtggcagagagggacgcggtgaaaatagaggacagacttttaaacaactctttgggatccccagttcaagcc gaagtgtattttccacgactgattgtccctttctgtgggcacatcaaaggaggcatgaggccaggcaagaaagtcgtggt aatgggcatcgtggatctcaacccagagagttttgacatcagtcttacatgtggagattcagaagatcctcctgctgata cagcaattgaactgaaagccttattttcagataaacagttcctcaggaattcctgcatatctggagaatggggagaagag cagtcatctcttccatatttcccatttatccctgaccagcccttcagggttgaaatattgtgtgaacaccctcgttttag aatattcgtggacggacaccagctttttgatttttaccatcgcattgagaagttatcagctattgatacaataaagataa atggagacctccagattactaaacttggttgacctaggtttttcaaattattatttaaaaaaacaaaacaaaacaaagat aaccaaaattttagattccaaattggct |
|
Protein
| Protein ID | habu1_s939_g03336.t1 |
|---|---|
| Definition | - |
>habu1_s939_g03336.t1 MAGSVAERDAVKIEDRLLNNSLGSPVQAEVYFPRLIVPFCGHIKGGMRPGKKVVVMGIVDLNPESFDISLTCGDSEDPPA DTAIELKALFSDKQFLRNSCISGEWGEEQSSLPYFPFIPDQPFRVEILCEHPRFRIFVDGHQLFDFYHRIEKLSAIDTIK INGDLQITKLG |
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