Gene
| Gene Model ID | habu1_s939_g03339 |
|---|---|
| Locus | habu1_scaffold939 : 176472 ... 285095 : - |
| To GenomeBrowser | habu1_scaffold939:176472..285095 |
| Genes list of scaffold | habu1_scaffold939 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s939_g03339.t1 | 1 | 1 | SERTA | 137 | 174 | 8.0e-17 | 60.2 | 2.0e-20 | 1.5e-16 | 59.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s939_g03339.t1 | gi|602650754|ref|XP_007431770.1| | PREDICTED: SERTA domain-containing protein 2-like [Python bivittatus] | 0.0 |
| habu1_s939_g03339.t1 | gi|637250601|ref|XP_003215270.2| | PREDICTED: SERTA domain-containing protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s939_g03339.t1 | gi|530587086|ref|XP_005287283.1| | PREDICTED: SERTA domain-containing protein 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s939_g03339.t1 | gi|591376535|ref|XP_007062934.1| | PREDICTED: SERTA domain-containing protein 2 [Chelonia mydas] | 0.0 |
| habu1_s939_g03339.t1 | gi|557324714|ref|XP_006035385.1| | PREDICTED: SERTA domain-containing protein 2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 1.1 |
| Nose | 0.4 |
| Brain-1 | 1.1 |
| Eye | 0.6 |
| fetal fibroblast | 3.6 |
| venom gland-2 | 0.7 |
| Brain-2 | 0.9 |
| Spleen | 2.7 |
| Lung | 0.8 |
| Liver | 1.4 |
| Kidney | 2.0 |
| Pancreas | 0.9 |
| Small intestine | 2.0 |
| Large intestine | 1.0 |
| Stomach | 1.0 |
| heart | 0.9 |
| ovary | 1.1 |
| cheek muscle | 3.5 |
Transcript
| Transcript ID | habu1_s939_g03339.t1 |
|---|---|
| Definition | - |
>habu1_s939_g03339.t1 taagatgctcagcttgtcaactggaaggttggcagtttgagaccaatgtgatggggtgacttcccattcctgtcccagct cctgcccacctagcagtttaaaagcatgcaaatcttttgtggacttccggtgggacggcgcgccgatggcggctcttttg gagccgtcctcttgggaaggcgtcagagccagcatgaacagcggccaacagctgttcagcggcttggaaccttgtgcccc gggcgaaggggtcgagggggttggactaggagacctccaaggtcccttccaacatgatgatgatgatgatgatgatgatg atgatgatgatgatgatgatgcccatatcaatccactcagggccaagatctcttcactgaagggcgtgcaagatgagggc tggagccagcacgttaccttttcatttcgaagatatatgttggggaaaggaggaaaacggaagtttgatgagcatgaaga tgggctggaaggcaaagtggtgtctcctaccgatggtccatctaaggtgtcttacaccttacagcgccagactatcttca acatttcccttatgaaactttataaccacaggcccttaacagagccaagcctgcaaaagaccgttttaatcaacaacatg ttgaggcggatccaagaggagctcaaacaggaaggcagcttgaggcctatgttcctcaccccatcacagcctacagatcc tctgggagacaactttagagaagctcagcctgcctttagccatctggcctctccgccagtccaccccactgacttagcaa gccctacaccactggagtcttgcctcacccctgcctctctgcttgaggatgacactttttgcacttcccagactatctca ctagatggtcctccaaaattaccacctccaacgatccaaccagtaaaggacagcttctcctcagccttggatgaaattga ggaactctgtccaacacctacctccgctgaggcagtagtaactacagcagcagcagatacaactgcaccagataattcta aggagaattccagtgaatccagcattcaaaagcctgagggtatacaggagaacagaatgagtgagcctaaactcatggat tcattacctggcaattttgagatcacaacttctacaggttttcttacagacttgaccctggatgatattctctttgcaga cattgatacgtctatgtatgattttgacccttgcacatcctctacaggggctgcctcaaaaatggctcctgtctccgcag atgacctcctcaaaactctggcaccctacagtacccagccagtaacccccaatcagcctttcaaaatggaccttacagaa ctggatcacattatggaggtgcttgttgggtcatagatgatagcaactttttaaacgcaccagtataaacccttggtagt attttcacaag |
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Protein
| Protein ID | habu1_s939_g03339.t1 |
|---|---|
| Definition | - |
>habu1_s939_g03339.t1 MAALLEPSSWEGVRASMNSGQQLFSGLEPCAPGEGVEGVGLGDLQGPFQHDDDDDDDDDDDDDDDAHINPLRAKISSLKG VQDEGWSQHVTFSFRRYMLGKGGKRKFDEHEDGLEGKVVSPTDGPSKVSYTLQRQTIFNISLMKLYNHRPLTEPSLQKTV LINNMLRRIQEELKQEGSLRPMFLTPSQPTDPLGDNFREAQPAFSHLASPPVHPTDLASPTPLESCLTPASLLEDDTFCT SQTISLDGPPKLPPPTIQPVKDSFSSALDEIEELCPTPTSAEAVVTTAAADTTAPDNSKENSSESSIQKPEGIQENRMSE PKLMDSLPGNFEITTSTGFLTDLTLDDILFADIDTSMYDFDPCTSSTGAASKMAPVSADDLLKTLAPYSTQPVTPNQPFK MDLTELDHIMEVLVGS |
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