Gene
| Gene Model ID | habu1_s9825_g19690 |
|---|---|
| Locus | habu1_scaffold9825 : 4796 ... 6110 : + |
| To GenomeBrowser | habu1_scaffold9825:4796..6110 |
| Genes list of scaffold | habu1_scaffold9825 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retrotransposon-derived protein partial | GO:0005488 GO:0043170 GO:0044238 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9825_g19690.t1 | 1 | 1 | Chromo | 219 | 268 | 7.2e-11 | 41.5 | 9.2e-15 | 1.4e-10 | 40.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.6 |
| Kidney | 0.2 |
| Pancreas | 0.4 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.3 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s9825_g19690.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19690.t1 gcagcacatctttcgcctccatggcctgccagacagggtggtgtcggagcacggagcccagttcatggcccgcttctgga aaagcctcatggccacactggaggtgcaggtgtgtctgtcgtcgtcgcaccatccggagactgacgggggcacggagaag gtcatcggcatcctggagcagtacctccgctgttttgtcaaccagtggcaggacaactgggccaagtaccttcccctggc ggttttcgccttcaacaactcccaacacacctccacccagatgaccccgttccatgccaacgtcagctaccatccatggc ttttcccgttgtccatctcgaattcccctgttcccaagacccaggacttcctctcggagctccaggcggtgcagcaactg gtgaggcggcagctgatccgggcgaaagagaactataaacgggtcgccgaccgctctcgacgggcaacgccaccactgga cgtcagagatcgggtgtggctttccacgaaacacctccccacggaccggccggtgaagaaactggaccatcgttttatcg gtcccttccccgtcgaggcagtcatcagcccggtggcctaccggttgaccctaccacgctccatgcggatccaccccgtt ttccatcggtccctcctggtccctgaggccccagcgagccatctccgacgcctgccgacgcctgcccccccagccgcagc cgatgaggaggacacctcgacgtacgaggtggacagtatccgggactcccgttggctgaaggggcgcttccaatacctca tcgcctggaagggatatggccccgaggatttcagctgggtggacgcgtcttccgttcaggcccctgacctggtacaggcc tttcacgatcggttcccgtcccgaccgcatcccgaccggcagactcgggggaagggccctgcggtgggggatagtgttgt ggctccgtcttgtgagcccctcttatcggaggaagaaggctccgaacatgaaggagaggagatggccaggcctccctctc caggaccctcctctttggcaatgcctcaggtgtcttccgacggagaagagattgaccaggagccaggtggttctgagatt ggccaggagcccggtgtttctcagattggccaggagccaggtgtgtcggataatgaggaagaaaagttgtggctggatcc acgccagcgtagaagcgacaagcgtgcgcagcagaaaaagagacgtgccagagattaagctgagtcactggaccacaccc cacaggctataaaagggtggtggtggccatttgga |
|
Protein
| Protein ID | habu1_s9825_g19690.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19690.t1 MATLEVQVCLSSSHHPETDGGTEKVIGILEQYLRCFVNQWQDNWAKYLPLAVFAFNNSQHTSTQMTPFHANVSYHPWLFP LSISNSPVPKTQDFLSELQAVQQLVRRQLIRAKENYKRVADRSRRATPPLDVRDRVWLSTKHLPTDRPVKKLDHRFIGPF PVEAVISPVAYRLTLPRSMRIHPVFHRSLLVPEAPASHLRRLPTPAPPAAADEEDTSTYEVDSIRDSRWLKGRFQYLIAW KGYGPEDFSWVDASSVQAPDLVQAFHDRFPSRPHPDRQTRGKGPAVGDSVVAPSCEPLLSEEEGSEHEGEEMARPPSPGP SSLAMPQVSSDGEEIDQEPGGSEIGQEPGVSQIGQEPGVSDNEEEKLWLDPRQRRSDKRAQQKKRRARD |
|