Gene
| Gene Model ID | habu1_s9825_g19691 |
|---|---|
| Locus | habu1_scaffold9825 : 17597 ... 26245 : - |
| To GenomeBrowser | habu1_scaffold9825:17597..26245 |
| Genes list of scaffold | habu1_scaffold9825 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hepatocyte nuclear factor 6 | GO:0006357 GO:0009653 GO:0009888 GO:0030154 GO:0031016 GO:0048522 GO:0048534 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9825_g19691.t1 | 1 | 1 | CUT | 216 | 294 | 6.8e-32 | 109.1 | 2.5e-35 | 1.2e-31 | 108.3 |
| habu1_s9825_g19691.t1 | 1 | 1 | Homeobox | 315 | 368 | 9.1e-10 | 38.0 | 3.7e-13 | 1.8e-09 | 37.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9825_g19691.t1 | gi|602672828|ref|XP_007441915.1| | PREDICTED: hepatocyte nuclear factor 6-like, partial [Python bivittatus] | 0.0 |
| habu1_s9825_g19691.t1 | gi|126277592|ref|XP_001370228.1| | PREDICTED: hepatocyte nuclear factor 6 isoform X1 [Monodelphis domestica] | 0.0 |
| habu1_s9825_g19691.t1 | gi|557265129|ref|XP_006018015.1| | PREDICTED: hepatocyte nuclear factor 6 [Alligator sinensis] | 0.0 |
| habu1_s9825_g19691.t1 | gi|543353850|ref|XP_005521539.1| | PREDICTED: hepatocyte nuclear factor 6 [Pseudopodoces humilis] | 0.0 |
| habu1_s9825_g19691.t1 | gi|530636596|ref|XP_005305133.1| | PREDICTED: hepatocyte nuclear factor 6 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.1 |
| Brain-1 | 0.6 |
| Eye | 0.1 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.7 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.5 |
| ovary | 0.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s9825_g19691.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19691.t1 ggccaccccttagctcccccaacaggcgccatggccatggctatggatggcggcggcggcggcggggggggggaagaata ccactcccatgcgcatcaccggagctccgcggaacccccgctggccggaccgctgcaccccctgactgggagctgccaga gtcccgccgggctgaccgggagcagcagctacactactctgacgcccctgcaaccgcccctgccgcccatctccaccgtt tcgcccaagtttcctcaccatccccagtcacacccgcaagcgcatcacaggttggcgggcaactttactctcttgtccga caatctttacccctcaccctaccccaaagaagtggccggcctgggacagactctctccccattgggcgggctccacaaca cccagcaagccctgtcgcattatgccgacgctggagtcgccatgccggccgagaaaatgcttacccccagcggcttcgaa gcgcagcacccacccctcttagcccggccgggcgaccagcatctcaccccgactacagcctgcctggttccgcttggcgg gatcccccgccaatctcacacccatctgagcgcccgagggcacgggcagatccaggcctcctccagggaacctaagcccg ccgccgccgcgcaagggagcgccgggaatcactcagggcagctggaagagatcaacaccaaggacgtggcccaacggatc accaccgagctgaagcgctacagcatcccgcaagccatcttcgcccagagggtcctcggccgctcgcagggaacgctttc cgacctgttgaggaaccctaagccctggagcaagctcaaatctgggcgggagacctttcgcaggatgtggaagtggctgc aggagcccgaattccagcggatgtctgcactccgattggcagcttgtaaacggaaggagcaagatcaagggaaagaccga ggaaatgcactcaaaaaacccagactggtctttactgatgttcagcgccgaactctctatgcaatattcaaggaaaataa acgtccttccaaagaattacagatcaccatttcccatcagttggggctggagctgagcaccattagcaatttcttcatga acgcacgacggaggagcctagagaaatgtaactgaaagtagatatgattatgatttggaagtatccctgcaatatcaaca gaaataaagaaaatgaatatcacttcccat |
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Protein
| Protein ID | habu1_s9825_g19691.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19691.t1 MAMAMDGGGGGGGGEEYHSHAHHRSSAEPPLAGPLHPLTGSCQSPAGLTGSSSYTTLTPLQPPLPPISTVSPKFPHHPQS HPQAHHRLAGNFTLLSDNLYPSPYPKEVAGLGQTLSPLGGLHNTQQALSHYADAGVAMPAEKMLTPSGFEAQHPPLLARP GDQHLTPTTACLVPLGGIPRQSHTHLSARGHGQIQASSREPKPAAAAQGSAGNHSGQLEEINTKDVAQRITTELKRYSIP QAIFAQRVLGRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQDQGKDRGNALKKPRLV FTDVQRRTLYAIFKENKRPSKELQITISHQLGLELSTISNFFMNARRRSLEKCN |
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