Gene
| Gene Model ID | habu1_s9825_g19698 |
|---|---|
| Locus | habu1_scaffold9825 : 130096 ... 131665 : - |
| To GenomeBrowser | habu1_scaffold9825:130096..131665 |
| Genes list of scaffold | habu1_scaffold9825 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mgc81028 protein | GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s9825_g19698.t1 | 1 | 1 | Ribosomal_L24e | 1 | 64 | 2.0e-28 | 98.0 | 1.4e-32 | 2.0e-28 | 98.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s9825_g19698.t1 | gi|327291203|ref|XP_003230311.1| | PREDICTED: probable ribosome biogenesis protein RLP24 [Anolis carolinensis] | 0.0 |
| habu1_s9825_g19698.t1 | gi|148228581|ref|NP_001085900.1| | MGC81028 protein [Xenopus laevis] | 0.0 |
| habu1_s9825_g19698.t1 | gi|187607287|ref|NP_001120140.1| | probable ribosome biogenesis protein RLP24 [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s9825_g19698.t1 | gi|147903743|ref|NP_001079441.1| | ribosomal L24 domain containing 1 [Xenopus laevis] | 0.0 |
| habu1_s9825_g19698.t1 | gi|558114978|ref|XP_006112828.1| | PREDICTED: probable ribosome biogenesis protein RLP24-like isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 42.4 |
| Venom grand-1 | 91.0 |
| Pit, infrared sensing | 50.4 |
| Nose | 42.1 |
| Brain-1 | 18.1 |
| Eye | 33.5 |
| fetal fibroblast | 122.4 |
| venom gland-2 | 88.9 |
| Brain-2 | 19.1 |
| Spleen | 76.6 |
| Lung | 52.2 |
| Liver | 196.3 |
| Kidney | 126.0 |
| Pancreas | 250.5 |
| Small intestine | 97.9 |
| Large intestine | 70.9 |
| Stomach | 130.2 |
| heart | 49.5 |
| ovary | 179.7 |
| cheek muscle | 83.3 |
Transcript
| Transcript ID | habu1_s9825_g19698.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19698.t1 gcgcagtgagacgaggtgccactctatccagaccacagaggcgctcttccgcctcctccttagccgccgccatgcgcgtg gagaagtgctacttctgctccgggccggtgtacccgggtcacgggatgctctttgtccgcaacgactgcaaggcgttccg gttctgccggtccaagtgccaccggagcttccagaagaaacgcaacccgcggaaggtgcgctggaccaaggccttccgcc gggcggcgggcaaggagctggcggtggaccggtccttcgagttcgagaagcggcgccacgagcccgtgaagtaccagcgg gagctgtggagccagagcgtggaagcgatgaagcgagtggaggagatcaagcggaagcgccaggccaagttcgtctggaa cagattaaagaaggggaaagagttgcagaaagcacaggatatcaaagaagtcaaacaaaacattcacctcatccaggctc cccacgcaggcaaagccaagctgatggaggaaaagatggtccagatgctacaggacacagtgcccatggaagattcttga agagttgtgttgtttgtgtcctggcctatttaatttgggaggagaggctggggctattgtttatattttgtgagctgcag cttcaaggggaatatgtgtaaaccaaatatatggaaattagaaataaaatagtggccagaaaatgatgat |
|
Protein
| Protein ID | habu1_s9825_g19698.t1 |
|---|---|
| Definition | - |
>habu1_s9825_g19698.t1 MRVEKCYFCSGPVYPGHGMLFVRNDCKAFRFCRSKCHRSFQKKRNPRKVRWTKAFRRAAGKELAVDRSFEFEKRRHEPVK YQRELWSQSVEAMKRVEEIKRKRQAKFVWNRLKKGKELQKAQDIKEVKQNIHLIQAPHAGKAKLMEEKMVQMLQDTVPME DS |
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