Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s9825_g19700
Locus habu1_scaffold9825 : 140626 ... 148848 : +
To GenomeBrowser habu1_scaffold9825:140626..148848
Genes list of scaffold habu1_scaffold9825

Annotation by Blast2GO
Annotation GO
gpi mannosyltransferase partial GO:0008152 GO:0016757

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s9825_g19700.t3 1 1 Glyco_transf_22 43 263 0.0 192.1 0.0 0.0 191.7

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 26.7
Venom grand-1 43.0
Pit, infrared sensing 29.1
Nose 26.3
Brain-1 16.3
Eye 21.8
fetal fibroblast 28.1
venom gland-2 50.8
Brain-2 23.0
Spleen 34.3
Lung 40.1
Liver 57.3
Kidney 38.8
Pancreas 46.5
Small intestine 37.8
Large intestine 36.5
Stomach 38.9
heart 24.8
ovary 22.8
cheek muscle 29.1

Transcript
Transcript IDhabu1_s9825_g19700.t1
Definition-
>habu1_s9825_g19700.t1
gagggggcgcggcctcgcttctcccccgggagcgggctgctcttgcagcttcggcggggcgcccctaggcaggcggcgtg
ggggcttttccgggcggcggcggcggcggcggttcgcagtcggagagggcgcgcaggcgggcggcctccttccggagcgg
ctcggcgctgtagatgcctccgcccacgcccagcacgaacaccaccactaggcgcaccagcggctccgacccacgcatgg
ctgcgactgttgccttcctgttgctgcgcaggcgcgcggaatcggcgcaggcgcgcggacccgtcttccgcgcctgcgcc
ctcccgtcgatggtggtcgctatggagccgggtgtgggaacgcctgccgggaggcctcgcaggcggaagtcggggcagcg
ggaggggcgggaggagcagcgggcggccggtgccgcgcccgcccgggggctcctcgcgctgagcctggcggtgcggctgg
cctgctgcttctcggtgcggaccagcttcgtcccggacgaatactggcagtcgctggaggtggcgcaccgggcggccttc
ggatacgggagcctgacctgggagtgggccgagggcctgcgcagccctctctacccgctgctcttcgccggcctcttcaa
ggcgctgcagctgctgggcaaggacgaggcgccgctattgatttggctccctagggttttccaggcagttctggcagcat
ttgcagatgtgaagttatattccttggcaaagcggctggatcactttgagacggccaaatgggtgtacttttgccagttg
tgttcttggtttacatggtactgctgtaccaggaccctcaccaacactatggaagcggttctcaccatctttgctctttg
ctactatcccatggaaggcaccaaaatggagagcagccgctactacctagccctggttgcactggcgtgcattgttcgcc
caacagcttccattccatgggctccgctgctgctttggcactttgaaaaggagtccaacaagaagcgcctcctctggggt
gcttgccttccagtgggactaattgctttgggaggttcgttagtagttgacaggatattttttggcaagtgggttgtagt
tcccctcaactttctgaaattcaacgttctacatgagctggccaccttctacggatcccactcctggcactggtatttca
cccagggcttgccggcgatccttggtcctcacctgccttttttcctccatggctgtttcagtgccccgaggaagcatcgt
gtgttcttggttgttgtgctttggaccgtgacagcctacagcgttcttcgtcacaaagaattccgatttatctattccat
cctacccatctgtatgctcttctgtgggcattctctggctcaactgaagagaaggtggagaagggctgccgtttctttct
tgctgagctccagcctgcttcttgccctctacactggtttggtccatcagcgtggcactcttgatgtgatggtctacctc
cgggagctctgcaaccctttggcccgagaacaaacatccattctcctgctaatgccctgtcattcaactcctttatacag
ccatattcactgtccactgcaaataagatttcttcagtgccctccagatttgatgggaaaaagcaactatctggatgaag
ctgacttattttactctcaccccctccagtggctcaacaaagagtttcctaatgctacacaactaccttcccatttggtc
ttcttcaatgtacttgagcaggaaatatcatcatttctgatttcaaacagatatgtaaaaggtgccatattctttcatac
ccatctgcctcaaggacgtgttggaagccacatttatgtgttcaaaaagttattttgaagattgaccaaactgatttaag
ggatgggggatggggctgatgcaagagaagcaacaaagcagcaacccttgacctgaagtatactgatgaatgggtctgga
gaggtggaaggtaccagtacttttgttttagcaaaggcggccttgcgtgacccttctgctaaggtttcggatctgctcag
actatatg
Transcript IDhabu1_s9825_g19700.t2
Definition-
>habu1_s9825_g19700.t2
gagggggcgcggcctcgcttctcccccgggagcgggctgctcttgcagcttcggcggggcgcccctaggcaggcggcgtg
ggggcttttccgggcggcggcggcggcggcggttcgcagtcggagagggcgcgcaggcgggcggcctccttccggagcgg
ctcggcgctgtagatgcctccgcccacgcccagcacgaacaccaccactaggcgcaccagcggctccgacccacgcatgg
ctgcgactgttgccttcctgttgctgcgcaggcgcgcggaatcggcgcaggcgcgcggacccgtcttccgcgcctgcgcc
ctcccgtcgatggtggtcgctatggagccgggtgtgggaacgcctgccgggaggcctcgcaggcggaagtcggggcagcg
ggaggggcgggaggagcagcgggcggccggtgccgcgcccgcccgggggctcctcgcgctgagcctggcggtgcggctgg
cctgctgcttctcggtgcggaccagcttcgtcccggacgaatactggcagtcgctggaggtggcgcaccgggcggccttc
ggatacgggagcctgacctgggagtgggccgagggcctgcgcagccctctctacccgctgctcttcgccggcctcttcaa
ggcgctgcagctgctgggcaaggacgaggcgccgctattgatttggctccctagggttttccaggcagttctggcagcat
ttgcagatgtgaagttatattccttggcaaagcggctggatcactttgagacggccaaatgggtgtacttttgccagttg
tgttcttggtttacatggtactgctgtaccaggaccctcaccaacactatggaagcggttctcaccatctttgctctttg
ctactatcccatggaaggcaccaaaatggagagcagccgctactacctagccctggttgcactggcgtgcattgttcgcc
caacagcttccattccatgggctccgctgctgctttggcactttgaaaaggagtccaacaagaagcgcctcctctggggt
gcttgccttccagtgggactaattgctttgggaggttcgttagtagttgacaggatattttttggcaaggtaagctggtg
tcatcagatgcctccaaggattgctgctgagtcttgaaccccctcactgcctttctctgagctctactcttcttacagcc
tataagatgggcactgggccaccagtctcgtcttactttcctgtgcctgtcccattgtctctccccttttatctgtactc
attttcaaatggggaaggcgctgggcttgcaggagaaattggtgaaagactgagcccaggtcatgttttgaggattagac
aaatgcagggtggaggttgcagggcctccccttcatatgattcctagctccgttttccaatggtgtaactgtgtgcaggt
ggtggtggtgtaggtgttggataaagtggttgcatcagagtgttgccagtccttgccaggcaaagcaaattgtcttctag
tccaggcttgagactgtgcaacatatccttatgttgagcttgattgttagcacttctttgcctttgtccaacttcccaac
caagcttagagcgctgccaagctggccatctcccatgcgagctctaatcagacctgacccttacttttttcgctctggaa
aagggagacctgagttgatgtggctcccaaatgttctcccaaggggtgcagggaaaatttgcaggcattcctcttatggg
gcaacctgactgttccttttctcgttcctgcagtgggttgtagttcccctcaactttctgaaattcaacgttctacatga
gctggccaccttctacggatcccactcctggcactggtatttcacccagggcttgccggcgatccttggtcctcacctgc
cttttttcctccatggctgtttcagtgccccgaggaagcatcgtgtgttcttggttgttgtgctttggaccgtgacagcc
tacaggtaccccatgttcctgttctgagattaaggctcgtttcatgcccttgctcttgttgccgcttgggattaaggctt
tactgccctgccctatccagccctgctgaaggtagcttaatcagcttgcccttaatcagccaagcaaaggggagcctctg
ggcaggatggagccttccaggttttctgaggaagagacgccttggacttaattactcaggtaaaagtttgggggtggggt
gggagaggcgtgtccatgatggccttccctgtccatttcttacagcgttcttcgtcacaaagaattccgatttatctatt
ccatcctacccatctgtatgctcttctgtgggcattctctggctcaactgaagagaaggtggagaagggctgccgtttct
ttcttgctgagctccagcctgcttcttgccctctacactggtttggtccatcagcgtggcactcttgatgtgatggtcta
cctccgggagctctgcaaccctttggcccgagaacaaacatccattctcctgctaatgccctgtcattcaactcctttat
acagccatattcactgtccactgcaaataagatttcttcagtgccctccagatttgatgggaaaaagcaactatctggat
gaagctgacttattttactctcaccccctccagtggctcaacaaagagtttcctaatgctacacaactaccttcccattt
ggtcttcttcaatgtacttgagcaggaaatatcatcatttctgatttcaaacagatatgtaaaaggtgccatattctttc
atacccatctgcctcaaggacgtgttggaagccacatttatgtgttcaaaaagttattttgaagattgaccaaactgatt
taagggatgggggatggggctgatgcaagagaagcaacaaagcagcaacccttgacctgaagtatactgatgaatgggtc
tggagaggtggaaggtaccagtacttttgttttagcaaaggcggccttgcgtgacccttctgctaaggtttcggatctgc
tcagactatatg
Transcript IDhabu1_s9825_g19700.t3
Definition-
>habu1_s9825_g19700.t3
gcgcaggcgggcggcctccttccggagcggctcggcgctgtagatgcctccgcccacgcccagcacgaacaccaccacta
ggcgcaccagcggctccgacccacgcatggctgcgactgttgccttcctgttgctgcgcaggcgcgcggaatcggcgcag
gcgcgcggacccgtcttccgcgcctgcgccctcccgtcgatggtggtcgctatggagccgggtgtgggaacgcctgccgg
gaggcctcgcaggcggaagtcggggcagcgggaggggcgggaggagcagcgggcggccggtgccgcgcccgcccgggggc
tcctcgcgctgagcctggcggtgcggctggcctgctgcttctcggtgcggaccagcttcgtcccggacgaatactggcag
tcgctggaggtggcgcaccgggcggccttcggatacgggagcctgacctgggagtgggccgagggcctgcgcagccctct
ctacccgctgctcttcgccggcctcttcaaggcgctgcagctgctgggcaaggacgaggcgccgctattgatttggctcc
ctagggttttccaggcagttctggcagcatttgcagatgtgaagttatattccttggcaaagcggctggatcactttgag
acggccaaatgggtgtacttttgccagttgtgttcttggtttacatggtactgctgtaccaggaccctcaccaacactat
ggaagcggttctcaccatctttgctctttgctactatcccatggaaggcaccaaaatggagagcagccgctactacctag
ccctggttgcactggcgtgcattgttcgcccaacagcttccattccatgggctccgctgctgctttggcactttgaaaag
gagtccaacaagaagcgcctcctctggggtgcttgccttccagtgggactaattgctttgggaggttcgttagtagttga
caggatattttttggcaaggtaagctggtgtcatcagatgcctccaaggattgctgctgagtcttgaaccccctcactgc
ctttctctgagctctactcttcttacagcctataagatgggcactgggccaccagtctcgtcttactttcctgtgcctgt
cccattgtctctccccttttatctgtactcattttcaaatggggaaggcgctgggcttgcaggagaaattggtgaaagac
tgagcccaggtcatgttttgaggattagacaaatgcagggtggaggttgcagggcctccccttcatatgattcctagctc
cgttttccaatggtgtaactgtgtgcaggtggtggtggtgtaggtgttggataaagtggttgcatcagagtgttgccagt
ccttgccaggcaaagcaaattgtcttctagtccaggcttgagactgtgcaacatatccttatgttgagcttgattgttag
cacttctttgcctttgtccaacttcccaaccaagcttagagcgctgccaagctggccatctcccatgcgagctctaatca
gacctgacccttacttttttcgctctggaaaagggagacctgagttgatgtggctcccaaatgttctcccaaggggtgca
gggaaaatttgcaggcattcctcttatggggcaacctgactgttccttttctcgttcctgcagtgggttgtagttcccct
caactttctgaaattcaacgttctacatgagctggccaccttctacggatcccactcctggcactggtatttcacccagg
gcttgccggcgatccttggtcctcacctgccttttttcctccatggctgtttcagtgccccgaggaagcatcgtgtgttc
ttggttgttgtgctttggaccgtgacagcctacaggtaccccatgttcctgttctgagattaaggctcgtttcatgccct
tgctcttgttgccgcttgggattaaggctttactgccctgccctatccagccctgctgaaggtagcttaatcagcttgcc
cttaatcagccaagcaaaggggagcctctgggcaggatggagccttccaggttttctgaggaagagacgccttggactta
attactcaggtaaaagtttgggggtggggtgggagaggcgtgtccatgatggccttccctgtccatttcttacagcgttc
ttcgtcacaaagaattccgatttatctattccatcctacccatctgtatgctcttctgtgggcattctctggctcaactg
aagagaaggtggagaagggctgccgtttctttcttgctgagctccagcctgcttcttgccctctacactggtttggtcca
tcagcgtggcactcttgatgtgatggtctacctccgggagctctgcaaccctttggcccgagaacaaacatccattctcc
tgctaatgccctgtcattcaactcctttatacagccatattcactgtccactgcaaataagatttcttcagtgccctcca
gatttgatgggaaaaagcaactatctggatgaagctgacttattttactctcaccccctccagtggctcaacaaagagtt
tcctaatgctacacaactaccttcccatttggtcttcttcaatgtacttgagcaggaaatatcatcatttctgatttcaa
acagatatgtaaaaggtgccatattctttcatacccatctgcctcaaggacgtgttggaagccacatttatgtgttcaaa
aagttattttgaagattgaccaaactgatttaagggatgggggatggggctgatgcaagagaagcaacaaagcagcaacc
cttgacctgaagtatactgatgaatgggtctggagaggtggaaggtaccagtacttttgttttagcaaaggcggccttgc
gtgacccttctgctaaggtttcggatctgctcagactatatg

Protein
Protein IDhabu1_s9825_g19700.t1
Definition-
>habu1_s9825_g19700.t1
MVVAMEPGVGTPAGRPRRRKSGQREGREEQRAAGAAPARGLLALSLAVRLACCFSVRTSFVPDEYWQSLEVAHRAAFGYG
SLTWEWAEGLRSPLYPLLFAGLFKALQLLGKDEAPLLIWLPRVFQAVLAAFADVKLYSLAKRLDHFETAKWVYFCQLCSW
FTWYCCTRTLTNTMEAVLTIFALCYYPMEGTKMESSRYYLALVALACIVRPTASIPWAPLLLWHFEKESNKKRLLWGACL
PVGLIALGGSLVVDRIFFGKWVVVPLNFLKFNVLHELATFYGSHSWHWYFTQGLPAILGPHLPFFLHGCFSAPRKHRVFL
VVVLWTVTAYSVLRHKEFRFIYSILPICMLFCGHSLAQLKRRWRRAAVSFLLSSSLLLALYTGLVHQRGTLDVMVYLREL
CNPLAREQTSILLLMPCHSTPLYSHIHCPLQIRFLQCPPDLMGKSNYLDEADLFYSHPLQWLNKEFPNATQLPSHLVFFN
VLEQEISSFLISNRYVKGAIFFHTHLPQGRVGSHIYVFKKLF
Protein IDhabu1_s9825_g19700.t2
Definition-
>habu1_s9825_g19700.t2
MVVAMEPGVGTPAGRPRRRKSGQREGREEQRAAGAAPARGLLALSLAVRLACCFSVRTSFVPDEYWQSLEVAHRAAFGYG
SLTWEWAEGLRSPLYPLLFAGLFKALQLLGKDEAPLLIWLPRVFQAVLAAFADVKLYSLAKRLDHFETAKWVYFCQLCSW
FTWYCCTRTLTNTMEAVLTIFALCYYPMEGTKMESSRYYLALVALACIVRPTASIPWAPLLLWHFEKESNKKRLLWGACL
PVGLIALGGSLVVDRIFFGKVSWCHQMPPRIAAES
Protein IDhabu1_s9825_g19700.t3
Definition-
>habu1_s9825_g19700.t3
MVVAMEPGVGTPAGRPRRRKSGQREGREEQRAAGAAPARGLLALSLAVRLACCFSVRTSFVPDEYWQSLEVAHRAAFGYG
SLTWEWAEGLRSPLYPLLFAGLFKALQLLGKDEAPLLIWLPRVFQAVLAAFADVKLYSLAKRLDHFETAKWVYFCQLCSW
FTWYCCTRTLTNTMEAVLTIFALCYYPMEGTKMESSRYYLALVALACIVRPTASIPWAPLLLWHFEKESNKKRLLWGACL
PVGLIALGGSLVVDRIFFGKVSWCHQMPPRIAAES

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Okinawa Institute of Science and Technology
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