Gene
| Gene Model ID | habu1_s997_g03485 |
|---|---|
| Locus | habu1_scaffold997 : 1 ... 36998 : + |
| To GenomeBrowser | habu1_scaffold997:1..36998 |
| Genes list of scaffold | habu1_scaffold997 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03485.t1 | 1 | 1 | Fibrinogen_C | 216 | 419 | 0.0 | 220.4 | 0.0 | 0.0 | 219.8 |
| habu1_s997_g03485.t1 | 1 | 1 | RFamide_26RFa | 489 | 560 | 4.4e-10 | 39.5 | 5.3e-12 | 1.6e-08 | 34.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03485.t1 | gi|602666903|ref|XP_007439021.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Python bivittatus] | 0.0 |
| habu1_s997_g03485.t1 | gi|564231324|ref|XP_006260059.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Alligator mississippiensis] | 0.0 |
| habu1_s997_g03485.t1 | gi|669294669|ref|XP_008640566.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Corvus brachyrhynchos] | 0.0 |
| habu1_s997_g03485.t1 | gi|557283160|ref|XP_006024465.1| | PREDICTED: fibrinogen C domain-containing protein 1-B-like [Alligator sinensis] | 0.0 |
| habu1_s997_g03485.t1 | gi|543367978|ref|XP_005527339.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 1.5 |
| Eye | 0.8 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 2.1 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s997_g03485.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03485.t1 agggtgaactgtagctacatcctctgcaccatcctcctctccgtggtgatcctcttagccgtcaccgtcactgccgccat cctcttcatgaaccactaccacaccccggtcaccgaatccccgcccatcatcaccaccaatccggatgatgccaatgctt tggtcaccattgagaaagccgacacttcccgcatcaacatcttcattgacccgaactgtccgagccaagccaacagcttc gtccgcttggagagcctgcaaacgtccctcctgcgagtcgtgacggaccacgaggccgagaccaagtcctccgcggggca ggaccgggccttgctggtgggcctctcggacgaggtctccaagctgctctctcacaccacccagctccggacggactgtg agaatttgaagaagggccacggcgccctcgggcaggagctgagcgccctccagaacgagcaagggcgcctcatacagcta ctttccgaaagccaaacccacatcgcgcagctggtgagctccgtcagcgacattctggacacgctacaaaaggagcggag cctcgcccggccacggatgaaggcggacctccagcggatcccgtctcggggcccacggcccaaaggatgtccgaacggct cgaggcctcgggattgcttggacgtctatgccggtgggcaacaaggggacggggtcttctccatcttccccactcactac ccggaggggttccaggtttactgtgacatgaccacagatggtggaggatggacggtctttcagaggcgtgaggacggctc cgtgaatttcttccgtggctgggaagcttacaaagatggattcggaaaactcacaggagaacactggctgggtctgaagc gaatccatgctctcagcacgcaaggaaactatgaattgcgcatcgacctggaggatttcgataatggcacggcctacgcc cattacgggacttttgcggtcggcctgttttccgtggacccggaggaagatggctaccccatcaccattgctgactattc tggaacagcaggagactctctcttgaaacacaacggcatgaaattcaccaccaaagacctggacaacgaccattcggaga acaactgcgccgccttttaccacggtgcttggtggtatcgcaactgccacacgtccaacctgaacggtcagtacctcaag ggccaccacagctcctatgcagatggcatcgagtggtcctcctggacagacggagaagcagggatattcagaccccatct gacaaactatcggaaaagatctgaatcccaaagacacaaaaatatgagggtccccaaccgcatctcctgccttctcctgc tgagttttgggacctctttccctgccaacagcctccaggccccgaaactccctggagaaggagtccaagtgatcccaaat ggacctgattttggggaagccgaacgtgtgaagtggcggcgttcacccgtggacctcaacccccttttcagcatcgccaa agagcttcagagcttcgggaaagagaaagcgggaatccagttccgattcgggaggcaggagatggacgagaaagaagcca gccgtctggggaaccccggagaagaactgaatcgttacgacaacaggaagaaaaccggccttagcctctggttcgggagg cgacaaagagaagcattttgttccaaaggcagctttcctggagcgccaaagctgacaggatccatttgacgtgattctgg caggatccatttgcagtgcttgctcttctcctaaacccatcacccatttctcacctctgcaatctccggggatctgaaag tttccaattc |
|
Protein
| Protein ID | habu1_s997_g03485.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03485.t1 RVNCSYILCTILLSVVILLAVTVTAAILFMNHYHTPVTESPPIITTNPDDANALVTIEKADTSRINIFIDPNCPSQANSF VRLESLQTSLLRVVTDHEAETKSSAGQDRALLVGLSDEVSKLLSHTTQLRTDCENLKKGHGALGQELSALQNEQGRLIQL LSESQTHIAQLVSSVSDILDTLQKERSLARPRMKADLQRIPSRGPRPKGCPNGSRPRDCLDVYAGGQQGDGVFSIFPTHY PEGFQVYCDMTTDGGGWTVFQRREDGSVNFFRGWEAYKDGFGKLTGEHWLGLKRIHALSTQGNYELRIDLEDFDNGTAYA HYGTFAVGLFSVDPEEDGYPITIADYSGTAGDSLLKHNGMKFTTKDLDNDHSENNCAAFYHGAWWYRNCHTSNLNGQYLK GHHSSYADGIEWSSWTDGEAGIFRPHLTNYRKRSESQRHKNMRVPNRISCLLLLSFGTSFPANSLQAPKLPGEGVQVIPN GPDFGEAERVKWRRSPVDLNPLFSIAKELQSFGKEKAGIQFRFGRQEMDEKEASRLGNPGEELNRYDNRKKTGLSLWFGR RQREAFCSKGSFPGAPKLTGSI |
|