Gene
| Gene Model ID | habu1_s997_g03491 |
|---|---|
| Locus | habu1_scaffold997 : 311986 ... 315581 : + |
| To GenomeBrowser | habu1_scaffold997:311986..315581 |
| Genes list of scaffold | habu1_scaffold997 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein c9orf78 homolog | GO:0005634 GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03491.t1 | 1 | 1 | Hep_59 | 41 | 131 | 8.6e-23 | 80.6 | 5.8e-27 | 8.6e-23 | 80.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03491.t1 | gi|507692376|ref|XP_004713390.1| | PREDICTED: uncharacterized protein C9orf78 homolog [Echinops telfairi] | 0.0 |
| habu1_s997_g03491.t1 | gi|470634862|ref|XP_004322968.1| | PREDICTED: uncharacterized protein C9orf78 homolog [Tursiops truncatus] | 0.0 |
| habu1_s997_g03491.t1 | gi|602649835|ref|XP_007431318.1| | PREDICTED: uncharacterized protein C9orf78 homolog [Python bivittatus] | 0.0 |
| habu1_s997_g03491.t1 | gi|472345584|ref|XP_004392530.1| | PREDICTED: uncharacterized protein C9orf78 homolog isoform X2 [Odobenus rosmarus divergens] | 0.0 |
| habu1_s997_g03491.t1 | gi|115496926|ref|NP_001069516.1| | uncharacterized protein C9orf78 homolog [Bos taurus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 48.4 |
| Venom grand-1 | 199.2 |
| Pit, infrared sensing | 89.1 |
| Nose | 52.7 |
| Brain-1 | 33.1 |
| Eye | 68.2 |
| fetal fibroblast | 34.9 |
| venom gland-2 | 96.3 |
| Brain-2 | 27.0 |
| Spleen | 85.4 |
| Lung | 99.6 |
| Liver | 167.4 |
| Kidney | 123.1 |
| Pancreas | 101.7 |
| Small intestine | 111.9 |
| Large intestine | 75.7 |
| Stomach | 99.8 |
| heart | 76.1 |
| ovary | 61.1 |
| cheek muscle | 120.1 |
Transcript
| Transcript ID | habu1_s997_g03491.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03491.t1 acgcgcgcccccagcttgcaaaacaggaagagctctgtggcggccccttttagcaaaattgatttgaggaggtgggagat ctccagtcatgccggccgggaagactttccgccggaggaaggccgactccgaggaggaagaggaggatgagctggtggcc gaggaggttcgtttaaaactagaagaagcgaaggaagtacagagtttaagaaggagacaaaatggagtaaggatgaaata catcgaaactgagctcaagaagaggaaggggattatggaaagcgaggtgcagaaaataaagcagaagaacgcagaggact gtctgtatgagctcccggagagcatccgggtctcttcggcgaagaagacggaagagatgctgtccaatcagatgctgagt gggattcctgaggtggaccttggaattgaggccaagataaaaaacatcatctcaactgaagatgcaaaggcaagattgct ggctgaacagcagaataagaagaaagacagcgaaacttccttcgtcccaactaatatggcggtgaattacgtccaacaca accgattttatcacgaagagctgaatgctccggtaagaagacataaagaggaaccgaaggctcgacccctgagggtggga gacaccgaaaaaaccgaaatggaaaagtctccgccaaaccgcaagcgcccaccgaacgagaaagccaccgacgattatca ctatgaaaagtttaagaagatgaatcggagatactgaagcgagcttgtttggttctcagagactgggctgtatttctaac gtttctcccttcttttcaatgttcattttgcttcaatttttctccacgaaactcctctgcgtcgaaatgtattgcatgtg caagcaataaagatttctcttttaagtggagga |
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Protein
| Protein ID | habu1_s997_g03491.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03491.t1 MPAGKTFRRRKADSEEEEEDELVAEEVRLKLEEAKEVQSLRRRQNGVRMKYIETELKKRKGIMESEVQKIKQKNAEDCLY ELPESIRVSSAKKTEEMLSNQMLSGIPEVDLGIEAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMAVNYVQHNRF YHEELNAPVRRHKEEPKARPLRVGDTEKTEMEKSPPNRKRPPNEKATDDYHYEKFKKMNRRY |
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