Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s997_g03494
Locus habu1_scaffold997 : 350396 ... 354482 : +
To GenomeBrowser habu1_scaffold997:350396..354482
Genes list of scaffold habu1_scaffold997

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s997_g03494.t1 gi|700325819|ref|XP_009929051.1| PREDICTED: F-box/WD repeat-containing protein 8, partial [Haliaeetus albicilla] 7.0e-34
habu1_s997_g03494.t1 gi|729723099|ref|XP_010573865.1| PREDICTED: F-box/WD repeat-containing protein 8 [Haliaeetus leucocephalus] 9.0e-34
habu1_s997_g03494.t1 gi|686592764|ref|XP_009272305.1| PREDICTED: F-box/WD repeat-containing protein 8 [Aptenodytes forsteri] 1.0e-33
habu1_s997_g03494.t1 gi|699672779|ref|XP_009885044.1| PREDICTED: F-box/WD repeat-containing protein 8 [Charadrius vociferus] 3.0e-33

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.8
Venom grand-1 3.5
Pit, infrared sensing 2.9
Nose 1.3
Brain-1 0.8
Eye 1.7
fetal fibroblast 3.0
venom gland-2 5.1
Brain-2 1.0
Spleen 4.6
Lung 3.2
Liver 9.8
Kidney 6.0
Pancreas 15.5
Small intestine 4.7
Large intestine 3.6
Stomach 8.8
heart 2.8
ovary 2.7
cheek muscle 3.5

Transcript
Transcript IDhabu1_s997_g03494.t1
Definition-
>habu1_s997_g03494.t1
ccctcctgtggttattttgggcatagaggcctgacagggactacaaagaccatctataggacagggcatgaaaagagtgc
cctcctgtggttattttgggcatagacgcctgagagggactacaaagaccatatataacacatggcatgcaaagagtgcc
ctcctatggttattttgggcatagcggccagaaaggggcttctaagaccatctatagcacagggcacccagttcgccacc
tccgcttcagctcccacagcctcatcatggcccacatccccaatgaaaagactcccgaaggggccagcatcacggacgac
gacttgaccgctcaccgaaggcacagaggcattatctacgcctacgaattctccacagacaagctggtggcagagagcgt
ccttcctatctgctgctcctcttacaacaaagtggccggctacagctacaacattggccttgtggtcccctatgacaaca
tctaggcagggtgggaagaagggaagtccagctgagctggaccctggagaaggagaacctcaaggatggcgttcctgcag
acctctttggagggctcggaagccacgggttggccaagcaggcagcagaagaaggggggcacatgggggtctccccaaag
ctttaataacagcgctgtaggaacgaagaagagatgaggggtaacaggaaccatgatagataggcaagaatcaggagaag
ataataaaggctttagcccaagaatcagga

Protein
Protein IDhabu1_s997_g03494.t1
Definition-
>habu1_s997_g03494.t1
MAHIPNEKTPEGASITDDDLTAHRRHRGIIYAYEFSTDKLVAESVLPICCSSYNKVAGYSYNIGLVVPYDNI

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