Gene
| Gene Model ID | habu1_s997_g03495 |
|---|---|
| Locus | habu1_scaffold997 : 377524 ... 397295 : - |
| To GenomeBrowser | habu1_scaffold997:377524..397295 |
| Genes list of scaffold | habu1_scaffold997 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paired mesoderm homeobox protein 2 | GO:0003677 GO:0042471 GO:0048522 GO:0048704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03495.t1 | 1 | 1 | Homeobox | 36 | 92 | 5.1e-23 | 80.4 | 2.0e-26 | 9.9e-23 | 79.5 |
| habu1_s997_g03495.t1 | 1 | 1 | OAR | 159 | 177 | 1.3e-08 | 34.0 | 5.0e-12 | 2.5e-08 | 33.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03495.t1 | gi|602671074|ref|XP_007441054.1| | PREDICTED: paired mesoderm homeobox protein 2, partial [Python bivittatus] | 0.0 |
| habu1_s997_g03495.t1 | gi|704460183|ref|XP_010081110.1| | PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2-like, partial [Pterocles gutturalis] | 0.0 |
| habu1_s997_g03495.t1 | gi|697841434|ref|XP_009641073.1| | PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2 [Egretta garzetta] | 0.0 |
| habu1_s997_g03495.t1 | gi|701404786|ref|XP_009997298.1| | PREDICTED: paired mesoderm homeobox protein 2 [Chaetura pelagica] | 0.0 |
| habu1_s997_g03495.t1 | gi|704333720|ref|XP_010172971.1| | PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2-like [Caprimulgus carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.2 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 4.9 |
| Nose | 1.2 |
| Brain-1 | 0.4 |
| Eye | 1.6 |
| fetal fibroblast | 12.1 |
| venom gland-2 | 1.1 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.4 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.1 |
| heart | 0.2 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s997_g03495.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03495.t1 aaactgggagttctagtcctggtatgaaaggcagctgggtcattttggaccaatcaccagaaggagatggtgaattctag tcccgccttaagcaagagagccagctgggtgactttaagccaatcaccaggagacgaaccaaagagtttggcgactgtca ccttctgaggtaaatttcagagccaccgtctctctcggcctctccagcgattccgatctgagaactcaaccgaagcctcc tgacgctctctgatgctacggctggtctaccccacagggctgaattctggctgtggtgtcagaggggaaagcctgagtcc ggcccactcctcctcctccaaacggaagaagaaacagcggaggaaccggaccaccttcaacagcagccaactgcaagctc tagaacgagtctttgagaggacgcactatccggacgctttcgtgcgggaggagctggcccgaagggtcagccttagtgaa gccagagtccaggtctggtttcagaaccgaagagcaaaattccgccggaacgagagagcgatgttggccaaccggtcagt atcgctcctcaaatcctacacccaagacacagccattgagcagcctgtcgctccccggcccaccaccctcagccccgact atctatcgtggtcagccacccccccctacagcaacacgatgccttcatacagttccagcacccccagcacccccaccccg ggcgtcaacatggccaacagcattgccagcttgcgcctgaaagccaaagagttcagcctccaccagaaccagaagccgag actcaacttccaaataactttacctggatgactcagaatctccgtcgacatacagatttgcactgaactctgcacatcct ctttggaacccacaaccctgttttttggctcagatgggagagcaacgaggaggtcctgcaagcaaagaagctgatgagcc acaaaaaagaggaccaagactttttgaaggtcaattgtgcagtaaacagctcatcgttcatgatgggctgaatggtgatc aaggatggctacagccttctgatctctgagtggtctcccattcaagtactaacaggtttgactgtgcttaggtttttgag acgagacatgcttgggcagggtgatgccagctgttgtgaccttggtaagatatagaagcctagtaaaaacagctacaact actagcagt |
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Protein
| Protein ID | habu1_s997_g03495.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03495.t1 MLRLVYPTGLNSGCGVRGESLSPAHSSSSKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVSLSEARVQ VWFQNRRAKFRRNERAMLANRSVSLLKSYTQDTAIEQPVAPRPTTLSPDYLSWSATPPYSNTMPSYSSSTPSTPTPGVNM ANSIASLRLKAKEFSLHQNQKPRLNFQITLPG |
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