Gene
| Gene Model ID | habu1_s997_g03496 |
|---|---|
| Locus | habu1_scaffold997 : 401786 ... 408046 : + |
| To GenomeBrowser | habu1_scaffold997:401786..408046 |
| Genes list of scaffold | habu1_scaffold997 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ankyrin repeat and socs box protein 6 | GO:0016567 GO:0035556 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03496.t1 | 2 | 1 | Ank_2 | 35 | 81 | 3.0e-26 | 91.5 | 1.5e-10 | 3.7e-07 | 30.3 |
| habu1_s997_g03496.t1 | 2 | 1 | Ank_4 | 38 | 79 | 1.7e-19 | 69.7 | 1.3e-09 | 3.1e-06 | 27.5 |
| habu1_s997_g03496.t1 | 1 | 1 | Ank_5 | 38 | 79 | 2.8e-16 | 59.1 | 4.7e-12 | 1.2e-08 | 34.9 |
| habu1_s997_g03496.t1 | 1 | 1 | Ank | 39 | 68 | 1.3e-22 | 78.3 | 2.7e-13 | 6.7e-10 | 38.2 |
| habu1_s997_g03496.t1 | 1 | 1 | Ank_3 | 39 | 65 | 1.1e-14 | 53.0 | 1.6e-09 | 3.8e-06 | 26.6 |
| habu1_s997_g03496.t1 | 2 | 2 | Ank_2 | 42 | 140 | 3.0e-26 | 91.5 | 3.1e-20 | 7.6e-17 | 61.4 |
| habu1_s997_g03496.t1 | 2 | 2 | Ank_4 | 74 | 115 | 1.7e-19 | 69.7 | 7.9e-08 | 0.0002 | 21.7 |
| habu1_s997_g03496.t1 | 1 | 1 | SOCS_box | 310 | 348 | 1.1e-10 | 41.1 | 4.6e-14 | 1.1e-10 | 41.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03496.t1 | gi|602671266|ref|XP_007441149.1| | PREDICTED: ankyrin repeat and SOCS box protein 6 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s997_g03496.t1 | gi|558186128|ref|XP_006128397.1| | PREDICTED: ankyrin repeat and SOCS box protein 6 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s997_g03496.t1 | gi|557283144|ref|XP_006024457.1| | PREDICTED: ankyrin repeat and SOCS box protein 6 [Alligator sinensis] | 0.0 |
| habu1_s997_g03496.t1 | gi|564267071|ref|XP_006272351.1| | PREDICTED: ankyrin repeat and SOCS box protein 6 [Alligator mississippiensis] | 0.0 |
| habu1_s997_g03496.t1 | gi|641764609|ref|XP_008167410.1| | PREDICTED: ankyrin repeat and SOCS box protein 6 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.4 |
| Venom grand-1 | 5.8 |
| Pit, infrared sensing | 5.2 |
| Nose | 4.0 |
| Brain-1 | 3.2 |
| Eye | 2.4 |
| fetal fibroblast | 5.2 |
| venom gland-2 | 4.7 |
| Brain-2 | 2.5 |
| Spleen | 3.1 |
| Lung | 8.5 |
| Liver | 8.2 |
| Kidney | 3.5 |
| Pancreas | 2.7 |
| Small intestine | 6.4 |
| Large intestine | 5.9 |
| Stomach | 4.4 |
| heart | 4.7 |
| ovary | 4.6 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s997_g03496.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03496.t1 ctcggatgtttttcagcagacagacatctcctccaacctgcagagggcaaaagggaaaataaaaaaataaaaccggacag aggttctttgcaatcgaaagctacgcctgcattttttttttcttccgcttcctgcatcttcccggatgcgaaaaaagaaa agaaaaagaaaaagaagagaaatccgtgtgaatggccagcttcagaagtgcaaaaaaacaattgcggagtttttgatccg aggcgatccggtcacttactacacagccttgcacatcgcggtgctgcggaaccagcctgacatggtggagctgctggtgc aacgcggcgcagacatcaaccgccgagaccggattcatgaaagtagtcctctggatctagccagcgaagagccggaacgc ttgccttgtctgcggcgtctcctagaactcggggccgatatcaacgctgctgataaacatggaaagacagctttgctgca tgcgctggccagcagcgacggggttcaaatccacaacatagaaaacatccggcttttgttggaaggaggcgcagacgtca aggccgccaccaaagacggggacacggtgttcaccttcatcatcttcctgctgggcgagacggtgggcagcgacgccgaa gaggccaagctgatcaaccgcttctgcttccaggccacgcggctgctgatggcccacggggccgaccccagcgagtgccc gccttacgagtccctcacccacctctgcctcaagagcttccggctgcatttcccactgctgcgcttcctcctagaatcgg gggcctcacccagctgctccctccacggacccgcctgctggtctggcttcgacaccatctttgagcgcctctcttcccac ctcagcgagtcggaggacgacagcttctccttagacttgctgcagaaagccgagaccgccctggagctgatgatggccag cggcccggtggtcaagctgcccagcaacttccagatcgatctgagccactgccggtaccaccaagagaagattcaggcgc ttttcgggaagctgaaacagctggagaacagcccgcctaccttgaagcatctctgccgagtctacctgcggcagcatctc caaccttggcccgtggacgtcaaggtgaaggccctccctctccccaactgcttgaagaggtacctccttatagatccgag cgcctctctggagcaggtgtgacctccccagatgagaatggacctccgacgtttgccatcccggatctcgccacgctgcg cagccagtgcatgaactgccagatctccattcagtgtccaacagccggttatgtggtgtctgtggcagcccgcttgagtg gtggctacatgggaatggattggactggggggaggtggaatctgcaatggaatcgcatcctgatggcagctaagctggtg gaaaagccctttgtggagttgtgtgccagccgaggaaggatttgcccctctatgccaaaggattgtgaggttgtgtaggc ttatgctggagctgtattgaacatccaaggttgggacaggaatgccgacagctgattaaaaggatgcccctacgctgttc at |
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Protein
| Protein ID | habu1_s997_g03496.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03496.t1 MRKKKRKRKRREIRVNGQLQKCKKTIAEFLIRGDPVTYYTALHIAVLRNQPDMVELLVQRGADINRRDRIHESSPLDLAS EEPERLPCLRRLLELGADINAADKHGKTALLHALASSDGVQIHNIENIRLLLEGGADVKAATKDGDTVFTFIIFLLGETV GSDAEEAKLINRFCFQATRLLMAHGADPSECPPYESLTHLCLKSFRLHFPLLRFLLESGASPSCSLHGPACWSGFDTIFE RLSSHLSESEDDSFSLDLLQKAETALELMMASGPVVKLPSNFQIDLSHCRYHQEKIQALFGKLKQLENSPPTLKHLCRVY LRQHLQPWPVDVKVKALPLPNCLKRYLLIDPSASLEQV |
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