Gene
| Gene Model ID | habu1_s997_g03499 |
|---|---|
| Locus | habu1_scaffold997 : 507781 ... 513265 : + |
| To GenomeBrowser | habu1_scaffold997:507781..513265 |
| Genes list of scaffold | habu1_scaffold997 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03499.t1 | 2 | 1 | IER | 1 | 71 | 0.0 | 225.9 | 1.90577e-43 | 2.8e-39 | 135.8 |
| habu1_s997_g03499.t1 | 2 | 2 | IER | 198 | 357 | 0.0 | 225.9 | 4.4e-28 | 6.5e-24 | 85.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03499.t1 | gi|530600101|ref|XP_005293542.1| | PREDICTED: immediate early response gene 5-like protein [Chrysemys picta bellii] | 0.0 |
| habu1_s997_g03499.t1 | gi|543368090|ref|XP_005527395.1| | PREDICTED: immediate early response gene 5-like protein [Pseudopodoces humilis] | 0.0 |
| habu1_s997_g03499.t1 | gi|527256209|ref|XP_005146380.1| | PREDICTED: LOW QUALITY PROTEIN: immediate early response gene 5-like protein [Melopsittacus undulatus] | 0.0 |
| habu1_s997_g03499.t1 | gi|45360515|ref|NP_988888.1| | immediate early response gene 5-like protein [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s997_g03499.t1 | gi|189044274|sp|Q66IT9.2|IER5L_XENLA | Immediate early response gene 5-like protein [Xenopus laevis] | 6.0e-37 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.0 |
| Venom grand-1 | 1.4 |
| Pit, infrared sensing | 8.8 |
| Nose | 3.6 |
| Brain-1 | 2.4 |
| Eye | 2.9 |
| fetal fibroblast | 90.7 |
| venom gland-2 | 3.1 |
| Brain-2 | 3.3 |
| Spleen | 1.4 |
| Lung | 6.6 |
| Liver | 1.0 |
| Kidney | 1.2 |
| Pancreas | 0.7 |
| Small intestine | 0.9 |
| Large intestine | 2.3 |
| Stomach | 1.0 |
| heart | 2.5 |
| ovary | 0.7 |
| cheek muscle | 1.9 |
Transcript
| Transcript ID | habu1_s997_g03499.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03499.t1 gggcggccgaagctgagcggccggcgaggaagatggagtgcgcgctggacgcccagagcctcatcagcctctcgctgcgc aagatccacatgtcgcgcacgcagcgcggcggcctgaagctgcacaagaacctgctggtctcctacgtgctccgcaacgc ccggcagctctacctgagcgagcgctacgccgagctgtaccgccgccagagcagcgccctgcccggccagccgccgccgc acccgctctaccccgagggggccggcatcgccctgccctccgcgcccgccctcggcgctcccccgccgctgggcgagctg gccggcccggacttccaggcgctgcccgccgccgcccccggaccggagggcctccagctgcggagctgcgccctggccag gccggatcccccgtccatgctgctgctgccgccgctgccgcccaccgacgacgctttggggctgcccggcgcggcgggcg tgtgccgggactcgccgctgcccttctacccgccgcggggctaccccggcccgagcttggcagcggcagcagcaggagga ggcgtcggcgtcggcgtcgggactgacttcggcggctcctgcgcgccctcggggcttccgccgtcggggcccggggcgca ctgctcgagccgcaccaccgtgctggacctggacacgcacgtggtgaccacggtggagaacggctacctgcaccaggact gctgctgcgcgccctgcccgccaggcggcctcgtccccgccgtcgtggcctccgcagccgccgccgcctgctgctgccca ccgccgccgccgccgcccagcccgggcgccaagcgcaagtacgagccggcgggcggcgctggggatccgccgcttctgcc gcctccgccgcctggtgcgccttcgcccttcgcctcctgtgccaagcgcgcccgcttcgaaggcttccccagcgctggac cggcgccctcgccttcctcctcctcctcttcctcctcctcctcctcctgctcccatccttcctcctcctcttcctcgccg gacgcttccaacatctccagcctgatctccatcttcggctccagcttcagcgggctgttaagattaattcatatttaatt ccatgcagttatgatcttactgccaaatgctcaaggcagataatgacatgaaaactcaaatagcaaaagaggctttttaa aaagcaagttaactaccttcaaatttaagtcaagtctttttcaagaatggacacgttcaacatattcttggcaacgctaa gaaaggggtaggaagagtttgtcaacttcaccctttggtctgtggcaccgagatcgcctggtggcgtctcattcaggccc aaagcagtttgaaacctgcttagttgtttggagatcagcccaggttagaataaaaatgttgttaagttcaattgtg |
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Protein
| Protein ID | habu1_s997_g03499.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03499.t1 MECALDAQSLISLSLRKIHMSRTQRGGLKLHKNLLVSYVLRNARQLYLSERYAELYRRQSSALPGQPPPHPLYPEGAGIA LPSAPALGAPPPLGELAGPDFQALPAAAPGPEGLQLRSCALARPDPPSMLLLPPLPPTDDALGLPGAAGVCRDSPLPFYP PRGYPGPSLAAAAAGGGVGVGVGTDFGGSCAPSGLPPSGPGAHCSSRTTVLDLDTHVVTTVENGYLHQDCCCAPCPPGGL VPAVVASAAAAACCCPPPPPPPSPGAKRKYEPAGGAGDPPLLPPPPPGAPSPFASCAKRARFEGFPSAGPAPSPSSSSSS SSSSSCSHPSSSSSSPDASNISSLISIFGSSFSGLLRLIHI |
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