Gene
| Gene Model ID | habu1_s997_g03501 |
|---|---|
| Locus | habu1_scaffold997 : 538671 ... 551754 : + |
| To GenomeBrowser | habu1_scaffold997:538671..551754 |
| Genes list of scaffold | habu1_scaffold997 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| carnitine o-acetyltransferase isoform x2 | EC:2.3.1.7 GO:0004092 GO:0005102 GO:0005739 GO:0005777 GO:0006522 GO:0006531 GO:0007165 GO:0019254 GO:0042967 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03501.t1 | 1 | 1 | Carn_acyltransf | 35 | 615 | 0.0 | 762.9 | 0.0 | 0.0 | 762.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03501.t1 | gi|641764643|ref|XP_008167422.1| | PREDICTED: carnitine O-acetyltransferase isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s997_g03501.t1 | gi|641764641|ref|XP_008167421.1| | PREDICTED: carnitine O-acetyltransferase isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s997_g03501.t1 | gi|558186115|ref|XP_006128394.1| | PREDICTED: carnitine O-acetyltransferase isoform X2 [Pelodiscus sinensis] | 0.0 |
| habu1_s997_g03501.t1 | gi|591372867|ref|XP_007061134.1| | PREDICTED: carnitine O-acetyltransferase isoform X2 [Chelonia mydas] | 0.0 |
| habu1_s997_g03501.t1 | gi|558186111|ref|XP_006128393.1| | PREDICTED: carnitine O-acetyltransferase isoform X1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.9 |
| Venom grand-1 | 8.8 |
| Pit, infrared sensing | 5.9 |
| Nose | 3.1 |
| Brain-1 | 3.1 |
| Eye | 3.9 |
| fetal fibroblast | 12.4 |
| venom gland-2 | 4.0 |
| Brain-2 | 3.1 |
| Spleen | 4.8 |
| Lung | 7.8 |
| Liver | 75.8 |
| Kidney | 25.6 |
| Pancreas | 3.7 |
| Small intestine | 9.5 |
| Large intestine | 6.2 |
| Stomach | 6.2 |
| heart | 31.4 |
| ovary | 6.6 |
| cheek muscle | 28.4 |
Transcript
| Transcript ID | habu1_s997_g03501.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03501.t1 cgttgcgcgggttttgcaaaagccccgatctccgccggcgcaatgctcgccttcctaggcaggaacatggcgaaaccgtc cagctggttgaagccggtggcgttacggaagctgcgaggccgctatctgacccatcaggagggcctgccccacctgcccg tccctcccctgcagcagactttggatcgttacctgctaatgctggagcccatcattagtgaggaggaactcggccacacc aaagatttggtgcgggattttcggaagccgggcggcgtcggagagcggttgcagaaagggctggagagaagagcgcggaa gaacgagaattggctttcagattggtggctgaaaacggcgtatctggagtatcggctgccggtggtcatccattccagcc ctggcgtggtgctgcccaaacaggatttcctggatcggcaaggccaactaaggtttgcggccaagatgatcgagggggct ctggacttcaagacgatggttgacaacgaaactctacctgtggaatatctcggcgggaaacctctttgcatgaaccagta ctaccagatcctctcgtcctgccgcatcccgggccccaaacgcgactcggtggtgaactacgcccaggggaagaaatcgc ccacccacatcaccgtggttcacaactttcagttctttcagctggatgtttacagcagcgacgggagccccctgaccacc gatcagatttttatccagctggagaagatttggaatacatcccttcaaaccaacaaggagcccatcgggattttgacaag caaccatcgcaacagttgggccaaagcctacaacaacctcatcaaagacaagacgaacaaggaatctgtgcgcacaattg aaaagagcatcttcaccgtctgcttggacgccccaattcctcgggtctcagacgacgtttataagagccgagtggctgcc cagatgttgcacggaggagggagtcgttggaatagtggaaaccgctggtttgacaaaaccctccagtttatcgtggcgga agatggatcctgcggattgatgtacgaacatgctccgtctgagggcccccccattgtggctctgctggatcacattgtgg agtacacaaagaagccagagcttgtaagatcccccatgatcccgttaccgatgccaaagaaactacggtttaatatcacc ccggaaatcaagaacgatattgaagacgccaagcagaatctcaacatcatggtgcaagatctggatatcaaagtcatcgt attccaccagtttgggaaaaattttcccaagtcggagaagatcagtccggatgcttttattcaaatcgctttgcagttgg cttattacagaatgtatggggagctttgttccacttacgagagtgcctcgcttcgcatgttccgtctcgggcggacggac accattcgctcgacctccgtggatgtgctgaagtttgtccagtccatgactgtggacaacatacaggatcaggagaaggc agaattgttgagacgagccacccaagcacaccgaagctatacggacatggccataaggggaaatgcgattgatcgtcatc ttttgggcctgaagcttcaagcgatcgaggatctggtgagcattcctgaactcttcatggacaccgcctacgctgtggcc atgcacttcaacctctccaccagccaggttcctgccaagacagactgtgtgatgtgttttggcccggtggtgccagacgg ctacggcgtttgctacaaccccatggaggagcacatcaactttgccgtctcggccttcaacagctgcagcgaaaccaacg ctgcccggctggcccattacttggaacaggccttgctggacatgcggcttctgcttcagtccacccccaagtccaaactt taagaggggacgctctggagaggcgaactgcctgctcaacttactgtcagctgggtgggcttcatcctgaccctggactc ccccgaaggatggaagacttttcgttgttgcgctgagtttgtgggacggaaatgaactgcaccacttaataggggagata cccctgcctcatccgccttcctctccctgctcacctttcctccgttcacatcagtctgtgccttaagagcgttttcgcag ggagaatggggaggggggctcctgaattgaaggggatcttggttggatgctggcttgaaagagaaggtcttggctcaaag cctcctgagaattttagcccgggattttgcacaatgtttgttctccacgtgaatagacaagtcgatttcatagcatccat cagtatgatgggtttcatggtagagccattttattgtctgatgataaagattgcttccccttcttcccttttcttcttcc tccccttccccttcttcttctccatcattatcatcctttctccttgtccttctcttccttctccatctcatcctcctcct ggaccaacggcggattctttgatcttacaaaattggcccagagagttgtcctgctagagttgataccatactaaggagca tttgaaaatggcaacgttgtctaggattttctgtgccaatagatgttatttcattaaatgataagccttttgttttttaa aatatatatatatatattagttgggagattagcccccaatttctttcagttttttagcttcctttgctgattggctattg ctggctaggattctggctacccaaaccaggataactattttaagtcacaagatgtaaacgtaagaccgacagttgtggca tggcaaaaagccaaccttcatgcccgcattttgaataaaatgttttttaagtttctaagat |
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Protein
| Protein ID | habu1_s997_g03501.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03501.t1 MLAFLGRNMAKPSSWLKPVALRKLRGRYLTHQEGLPHLPVPPLQQTLDRYLLMLEPIISEEELGHTKDLVRDFRKPGGVG ERLQKGLERRARKNENWLSDWWLKTAYLEYRLPVVIHSSPGVVLPKQDFLDRQGQLRFAAKMIEGALDFKTMVDNETLPV EYLGGKPLCMNQYYQILSSCRIPGPKRDSVVNYAQGKKSPTHITVVHNFQFFQLDVYSSDGSPLTTDQIFIQLEKIWNTS LQTNKEPIGILTSNHRNSWAKAYNNLIKDKTNKESVRTIEKSIFTVCLDAPIPRVSDDVYKSRVAAQMLHGGGSRWNSGN RWFDKTLQFIVAEDGSCGLMYEHAPSEGPPIVALLDHIVEYTKKPELVRSPMIPLPMPKKLRFNITPEIKNDIEDAKQNL NIMVQDLDIKVIVFHQFGKNFPKSEKISPDAFIQIALQLAYYRMYGELCSTYESASLRMFRLGRTDTIRSTSVDVLKFVQ SMTVDNIQDQEKAELLRRATQAHRSYTDMAIRGNAIDRHLLGLKLQAIEDLVSIPELFMDTAYAVAMHFNLSTSQVPAKT DCVMCFGPVVPDGYGVCYNPMEEHINFAVSAFNSCSETNAARLAHYLEQALLDMRLLLQSTPKSKL |
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