Gene
| Gene Model ID | habu1_s997_g03503 |
|---|---|
| Locus | habu1_scaffold997 : 565679 ... 574980 : - |
| To GenomeBrowser | habu1_scaffold997:565679..574980 |
| Genes list of scaffold | habu1_scaffold997 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03503.t1 | 1 | 1 | DUF2217 | 23 | 560 | 0.0 | 712.9 | 0.0 | 0.0 | 712.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03503.t1 | gi|602673297|ref|XP_007442146.1| | PREDICTED: protein FAM73B isoform X1 [Python bivittatus] | 0.0 |
| habu1_s997_g03503.t1 | gi|641764646|ref|XP_008167423.1| | PREDICTED: protein FAM73B [Chrysemys picta bellii] | 0.0 |
| habu1_s997_g03503.t1 | gi|591372873|ref|XP_007061137.1| | PREDICTED: protein FAM73B [Chelonia mydas] | 0.0 |
| habu1_s997_g03503.t1 | gi|557283044|ref|XP_006024409.1| | PREDICTED: protein FAM73B [Alligator sinensis] | 0.0 |
| habu1_s997_g03503.t1 | gi|695148782|ref|XP_009501956.1| | PREDICTED: protein FAM73B [Phalacrocorax carbo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.6 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 2.7 |
| Nose | 3.2 |
| Brain-1 | 2.8 |
| Eye | 3.3 |
| fetal fibroblast | 4.1 |
| venom gland-2 | 4.3 |
| Brain-2 | 2.6 |
| Spleen | 1.8 |
| Lung | 2.2 |
| Liver | 3.0 |
| Kidney | 3.0 |
| Pancreas | 0.4 |
| Small intestine | 2.1 |
| Large intestine | 2.2 |
| Stomach | 3.0 |
| heart | 10.2 |
| ovary | 14.4 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s997_g03503.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03503.t1 ggtatggtgagagctccccccgattaggagaatggtattggctacctggcttaggaaatagatgcacttcggaaggccga tggttggatcctgcctgacgctggactgccgtatcaacagcacaacctcgttcgcgacgcctgtttgcacaacccgagca ctttcccaacatggcgtttcagaggacggagggcatgtccattatccaggccttggctatgaccgtagcagagatccccg tgttcctttacaccacgtttgggcagtcggccttctccgcgctgaggatcactcccggcctccggaaggtgctctttgcc acggctctcgggacggtagctttggccttgacggcccaccagttgaagcggcgacggcggaagaaacgaatcaccccaga gaagtccagcgccaagcctgtggtggttccggtgcccatcttgcccacccgccgggtcccctcggtgaaaaaaggttatt ccggccgtcggctgcagagtcccggcagcaagagcaacgacacgctgagcgggatctcctccctggagcccagcaagcat tccagctcttcgcacagcctggcctccatggcggttgtcaactcccccagccccaccccagcttctgcagccccctggga agcccctttggggggagaagatccgggcgccgctggcgactgcagtgcggaaaacctttattttcaaggcatggagctgt ttgaagaggccctgcagaagtgggagcaggccttgaccgtccgtcagagggatccccccagcctctcggcctcttgggtc gtccccagggcggaagacctgctgctgcctgaagacctctgtgaggaatctcagaaaaaagaatttgcagacaagctgga attgctcctgtaccgggcgtataacctgcaggaggaatttggatcctctctgtcgaccgacaacctgttgcttgatttag agcagactctgatgttcccactgacggagcagtctctaaggcgccagcaagatgaggaggcagatagtgtgacctctgag gaatcctttttctcggccgcggagatctttgactccctggaaattgagaagacgccgttccagccttctaagccagctgt tgcctacgaagaagcgttgcggctggtgaaggatgggttggttttgtgcaggacctttcgcacagagcttttggggtgct acagcgatgatgattttctggcaaagcttcactgcatcaggcaagcttttcaggaactgctgctggtggagaacaaccag acattttttggagaggtgggcaaacgcatggtgatggggctgatgaccaaggccgagaagaacacaaagggtttccttga aagctacaaggagatgctgctctacacgctgagacaggagacgtggccaaccacacagaaggaactggaaggccgagggg tggtctgcatgaatttctttgatgttgccttggacttcatcctcatggatgctttagaagacctggagaatccgccttcc tccgttgtggccatcctgcgcaaccgttggctctccgacagcttcaaggagacggctcttgcgaccgcctgctggtcagt tctgaaggcgaagaggcggcttctgatggttccggatggttttatatctcatttttactccgtatcggagcacgtcagcc ctgtcctggcttttggcttcctggggcccaaacagcagctttttgaagtctgcagctttttcaagcatcagattatgcaa tatctgaaggacatgtttgacctggacattgtaaggtacacaacggtgtccttgttagccgaagacgtccttcagctgtc acggcgtcgcagtgacatcctgctcggctacttaggcgtggagaccatcccagaggtcaatgggactctgggaaatgaca gtgtttccttcgatagcgtcaactaagcttgcttgctcggagaagaccgtttggggcttataaatgggatttgttttctc cttttt |
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Protein
| Protein ID | habu1_s997_g03503.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03503.t1 MSIIQALAMTVAEIPVFLYTTFGQSAFSALRITPGLRKVLFATALGTVALALTAHQLKRRRRKKRITPEKSSAKPVVVPV PILPTRRVPSVKKGYSGRRLQSPGSKSNDTLSGISSLEPSKHSSSSHSLASMAVVNSPSPTPASAAPWEAPLGGEDPGAA GDCSAENLYFQGMELFEEALQKWEQALTVRQRDPPSLSASWVVPRAEDLLLPEDLCEESQKKEFADKLELLLYRAYNLQE EFGSSLSTDNLLLDLEQTLMFPLTEQSLRRQQDEEADSVTSEESFFSAAEIFDSLEIEKTPFQPSKPAVAYEEALRLVKD GLVLCRTFRTELLGCYSDDDFLAKLHCIRQAFQELLLVENNQTFFGEVGKRMVMGLMTKAEKNTKGFLESYKEMLLYTLR QETWPTTQKELEGRGVVCMNFFDVALDFILMDALEDLENPPSSVVAILRNRWLSDSFKETALATACWSVLKAKRRLLMVP DGFISHFYSVSEHVSPVLAFGFLGPKQQLFEVCSFFKHQIMQYLKDMFDLDIVRYTTVSLLAEDVLQLSRRRSDILLGYL GVETIPEVNGTLGNDSVSFDSVN |
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