Gene
| Gene Model ID | habu1_s997_g03505 |
|---|---|
| Locus | habu1_scaffold997 : 590860 ... 611370 : - |
| To GenomeBrowser | habu1_scaffold997:590860..611370 |
| Genes list of scaffold | habu1_scaffold997 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03505.t1 | 1 | 1 | Nup188 | 22 | 936 | 0.0 | 1062.4 | 0.0 | 0.0 | 1061.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03505.t1 | gi|602655353|ref|XP_007433426.1| | PREDICTED: nucleoporin NUP188 homolog [Python bivittatus] | 0.0 |
| habu1_s997_g03505.t1 | gi|700419477|ref|XP_009947883.1| | PREDICTED: nucleoporin NUP188 homolog, partial [Leptosomus discolor] | 0.0 |
| habu1_s997_g03505.t1 | gi|723141271|ref|XP_010287576.1| | PREDICTED: nucleoporin NUP188 homolog, partial [Phaethon lepturus] | 0.0 |
| habu1_s997_g03505.t1 | gi|591372877|ref|XP_007061139.1| | PREDICTED: nucleoporin NUP188 homolog [Chelonia mydas] | 0.0 |
| habu1_s997_g03505.t1 | gi|530599903|ref|XP_005293443.1| | PREDICTED: nucleoporin NUP188 homolog isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.1 |
| Venom grand-1 | 4.8 |
| Pit, infrared sensing | 5.6 |
| Nose | 5.3 |
| Brain-1 | 4.2 |
| Eye | 5.0 |
| fetal fibroblast | 11.7 |
| venom gland-2 | 6.2 |
| Brain-2 | 4.0 |
| Spleen | 4.9 |
| Lung | 4.9 |
| Liver | 3.9 |
| Kidney | 3.3 |
| Pancreas | 3.2 |
| Small intestine | 4.6 |
| Large intestine | 4.2 |
| Stomach | 3.1 |
| heart | 4.1 |
| ovary | 12.8 |
| cheek muscle | 2.2 |
Transcript
| Transcript ID | habu1_s997_g03505.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03505.t1 gacggccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnngccggccggagccccgagtctcgcccgctcagctccccctggagctctgaggaaggcatgtctt ttattttaaggagcagcagagaactgtggaccattcttttgggaagatcagctttgagagaaccggcacagatcgcagaa gagttgaataaacactggcagagattgcttgaaggacttcgttactacaaaccacccagttccaattcagcagaaatagt gaaagctgataaaaacgtgcctgcttcattgaaggaactgggactacgagtcagcaagtttttgggtttggatgaagagc aaagtgtgcagctcttacagtgttaccttcaagaggattatagagggactagagactcgctaaagaccgtgctgcaagat gagaggcagagccaaaccctgctgctaaagattgctgattactactacgaggaaagattttgtattcttcggtgtgttct tcacatcctcacttacttccaagatgagaggcacccttacatggtcccgtattcgcagtgtatggaaaaactggataagg aactggttcctaattatcggaagcagtttgaagagctgtataaagcagaagtgcctacatgggaaacacatggaagtcta atgacggagcggcatgtctctcgctggtttgtgcagtgcctccgtgaacaatccatgttgctggaaatcatcttccttta ctacgcctactttgagatgaccccggaggagctgctgacgttcgccaagctgttcaaggaacaggggttcggctctcggc agaccaacaggcacctggttgatgaaagcatggatcccctggtggatcggattgggtatttcagttctctaattctagtg gaaggcatggaaattgattctttacatgaacgattgttggacgacaggaaggaggagcataaatttgccggtaacggaca aatccgccaggaaatggaccgcctgctgctgactctcggggacattccccatcacgcccccgtcctcctggcctgggcct tgctccggcacacgctgagcgctgatgggtcaagcggggtgatccggcggatgggaagcactgcgatccaaatgaacgtc tttcagtacttgacaaagctgctccgagccataagctgtgaaggaaattgtatttccagcaccgcctgcatgtgcatcta cggcctgctctctttcgtgctgacttccctggagctgcagacgctgggcaatcagcaggacataattgacaccgcctgtg aagttttggcagcctcaagcattcctcccttgttctggaaaacggaacccacagcaggtctgggcattatcttggatagc gtctgtggcatgtttccacacctgctctctcctctcctgcagttactcaccgcacttgtttcagacaaatcgacggcaaa aaaggtttacacctttttggacaagatgtccttctatatcgagctttataagcacaaaccggcagacgtcatctctcatg aagacgggaccctctggaggaggcagacccccaaattgctgtacccccttggggcaggtcaaaccaaccttaggatccct caagggacgatcgggcaagtgatgctggatgaccgggcctatttggtacgctgggaatattcttacagcagttggaccct cttcacctgtgaaattgagatgctgttgcacgtggtgtccacggctgatgtcatccagcattgccagagagttaagccca tcatcgatctggttcacaaagtcatcagcaccgatgtgtccattgcagactgccttctgcccatcacctctcggatctac atgctgctgcaaaggttaaccaccgtgatttctcccccagttgagattatagcttcctgtgtcaaatgcttaacagtcct ggcttcccggatgcctgccaaggtctggactgatcttcatcatacaggctttttaccttttgtggcaaatccggtttcta atatgagtcacatgatcagtgcagagggaatgaatgctggaggctatgggaatctgctgatgggcattgagcagccccaa ggcgaatacagcgtcacaatctccttcctgaatttagttatgactttagtccgggggcagctgggcagcacccagagcca gggcctggtgccatgcatcgtgtttgtcctgaaggagatgctgccgaattatcacaagtggcgctataactcccatggag tgagagaaaaaataggatatcttatcctccagctgatccatgcgattttgaatctgtgccctgaaatggatcctcgtagc agcagtgcccccagtctccagtccctttgcatcttcagcctggccaatacagaagcgggccaggcggtcatcagcatcat gggcattggggtggacaccattgatatggtgatggccagccagtcctgcagtgatggggaatctcagggccagctgctga tccagacggtgaaactggccttctcggtcaccaacaacgtcatccggctgaagccgccctccagtgtggtgtcccctctg gagcatgccctgactcagcacggagcccaccggaacaatctgattgctgtcttggccaaatacatctaccataaacatga cccggccttgccacggctggccatccagctgctgaagcggctggcgacggtggctcccatgtcggtctacgcctgcctcg gcagcgatgcctctgccatccgcgacgccttcctcacccgcctgcagagcagaatcgaggacatgcgcatcaaagtcatg atcctcgacttcctcacggtggccgtggaaacccagcccggcctgatcgaattgtttcttaacctggaagtgaaagatgg gagcgacggctgcaaggagttcagcctaggggagtggagctgccttcacgtggtcctggagctgatggactccaagcggc aggagcgctactggtgcccccccctgctgcagcgagccaccatcgcctttctccatgccctgtggcaggaccgccgagac agcgccatgctggtcctccgaaacaagccaaagttttggggaaacttaaccaaccctttgtttggaactcttcctccacc gtccgaaacatctgagctcagtgtcttggaaacctgtgccttgataattaagataatttgcctggagatttattctgtgg tcaagggatcgctggaccagtccctgaaggacacgctcaagaggttttcggcggaaaagcgctttgcttactggtcgggc tacgtgaagtccctggccttccacgtggccgagacggagggcagcggctgcacctccctgaccgagtaccagctgctgat ctcagcctggcgaatgctgctcgtggtttccaccagccacgctgacatcgtgaacttgaccaactcagagattcagcagc tgtttctggacgtcttgagtgggaccaaggctttgctgctggttcccacttccgggtgctgcctgcagttggggtccatg ctgtgcaccctcctgctaattctgctgcgacagtggaggagcaagttggactcggtggatgaaatcacaaactccttgac gcagatgctggacggggtgcttcaggctgaccagcagatgatggagaagaccaaagccaagatcttctctgccctcatca ccgtcctgcagatgaaagaaactaaagccagtgaaatccctcactactcgcagctggtgttgagcgtgtgtgagaccctc caggaggaattcatcgccctcttcgatcacacccggcactgcctgtccacaggggatgccctggaggacaaagacagcat ggacactgacgacgtctcccggcacaagcagaaggaccagcgagacggggtgtgcgtgctgggccttcacttggccaagg agctctgtgaagtggacgaagagggagactgctggctgcaggtgatgcggaccctccccttgctgcccaccctctgcagc accttggaggtcagcctgaggctgaagcagaatttgcacttcacggaagcctcgctccacctgctgctcaccttggccaa gactcagcagggagcagccgcggtggccacagctggcatccttcacagcatctgccttcctctgctgagcgtctaccagc tgagcagtaacggaggggggcaggcccccgtttcctctcggcggtctctggacggcccgtcgtggcccggggtctatcgc ctggccatatcgctgatggagcgcctgctgaagaccctccggtacaacttcctgaccgacgccctggacttcgtgggtgt ccatcaggagaggatcctccagtgcttgaatgccgtccggacggtgcagagcctgccctgcctcgaagaagccgaccaca cggtgggcttcctcctccagctgtccaacttcgtgaaggagtggcacttccagctgccccagctgctgagggacgtccag gtcaatttgtgctacttgtgccaggcctgcacttcgctgctccacagtcgcaaaatgcttcagcattacttgcaggccaa gaacggcgagtccctcccctcggccgtcctgcctcgcctccagagagcccagcagacgtcggccaagccagccggccccg agtcggaggcagcggagcagagggcgctgagcaccgtccagtacagcctgctgaaaatcctcagcaagtgtctcgcggcc ttacgccacttcacccctgacatctgccagatccttctcgaccagtccctggacctggcggagtacaacatccttttcat gctgagctttacgacgcctgcctttgactcggaggtgccgccctcctttgggaccctgctggccaccgtcaacgtgaccc tgaacatgctaggggagctggataagaagaaggaccccttcactctggctgcagggccctccccccagcaggaagagaac aagacgctcaagcctctcctgatgtttacgatggaaaactgcttctacttgctcatctctcaggcggttcggtatctgaa ggatccggcagtgcactcgcgagataaacagcgcatgaaacaggagctcagctcagagctgagcacgctgctctccagcc tgtctcgctacttccgccgtggaggtccttcctcgcctgccgggggccttctcccctctccacagggaaagccctcctcc aagctggggccggaagggcaggagcccctcttccagctggtgcagacctttgtcagacacgtgcaaagatagaggccacc caccccggctcaagacgatccccctccagttcgtctccacggcttctgggacctccaccgccagggcggcattggctggt ccctgccagcaaaggactctgcctgtggggaaagtcccccaaacaactgagttaccagtaaatctggcttggcctcagta agcctatctcttatttttctagcttacgtacagcccaggatggaaagcagatggcgagagagtgaatatcccctctggga aaaatattgggcattaatctcatagttcaaggacggttttgtggcggagctttgccagctaagggcagagaacacccccc cctgctttctgtggggccagcgggacccgtctctgccgttccgagggcagaggagatatttttataaaggcctcgatcct ttttccagacaggatcagaattccattgcttgagtctccctttttgtacgagttgtttcctatttatattgattaaacac gtttctaagcaatgctggg |
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Protein
| Protein ID | habu1_s997_g03505.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03505.t1 MSFILRSSRELWTILLGRSALREPAQIAEELNKHWQRLLEGLRYYKPPSSNSAEIVKADKNVPASLKELGLRVSKFLGLD EEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQTLLLKIADYYYEERFCILRCVLHILTYFQDERHPYMVPYSQCMEKL DKELVPNYRKQFEELYKAEVPTWETHGSLMTERHVSRWFVQCLREQSMLLEIIFLYYAYFEMTPEELLTFAKLFKEQGFG SRQTNRHLVDESMDPLVDRIGYFSSLILVEGMEIDSLHERLLDDRKEEHKFAGNGQIRQEMDRLLLTLGDIPHHAPVLLA WALLRHTLSADGSSGVIRRMGSTAIQMNVFQYLTKLLRAISCEGNCISSTACMCIYGLLSFVLTSLELQTLGNQQDIIDT ACEVLAASSIPPLFWKTEPTAGLGIILDSVCGMFPHLLSPLLQLLTALVSDKSTAKKVYTFLDKMSFYIELYKHKPADVI SHEDGTLWRRQTPKLLYPLGAGQTNLRIPQGTIGQVMLDDRAYLVRWEYSYSSWTLFTCEIEMLLHVVSTADVIQHCQRV KPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLTTVISPPVEIIASCVKCLTVLASRMPAKVWTDLHHTGFLPFVANP VSNMSHMISAEGMNAGGYGNLLMGIEQPQGEYSVTISFLNLVMTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKWRYNS HGVREKIGYLILQLIHAILNLCPEMDPRSSSAPSLQSLCIFSLANTEAGQAVISIMGIGVDTIDMVMASQSCSDGESQGQ LLIQTVKLAFSVTNNVIRLKPPSSVVSPLEHALTQHGAHRNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYA CLGSDASAIRDAFLTRLQSRIEDMRIKVMILDFLTVAVETQPGLIELFLNLEVKDGSDGCKEFSLGEWSCLHVVLELMDS KRQERYWCPPLLQRATIAFLHALWQDRRDSAMLVLRNKPKFWGNLTNPLFGTLPPPSETSELSVLETCALIIKIICLEIY SVVKGSLDQSLKDTLKRFSAEKRFAYWSGYVKSLAFHVAETEGSGCTSLTEYQLLISAWRMLLVVSTSHADIVNLTNSEI QQLFLDVLSGTKALLLVPTSGCCLQLGSMLCTLLLILLRQWRSKLDSVDEITNSLTQMLDGVLQADQQMMEKTKAKIFSA LITVLQMKETKASEIPHYSQLVLSVCETLQEEFIALFDHTRHCLSTGDALEDKDSMDTDDVSRHKQKDQRDGVCVLGLHL AKELCEVDEEGDCWLQVMRTLPLLPTLCSTLEVSLRLKQNLHFTEASLHLLLTLAKTQQGAAAVATAGILHSICLPLLSV YQLSSNGGGQAPVSSRRSLDGPSWPGVYRLAISLMERLLKTLRYNFLTDALDFVGVHQERILQCLNAVRTVQSLPCLEEA DHTVGFLLQLSNFVKEWHFQLPQLLRDVQVNLCYLCQACTSLLHSRKMLQHYLQAKNGESLPSAVLPRLQRAQQTSAKPA GPESEAAEQRALSTVQYSLLKILSKCLAALRHFTPDICQILLDQSLDLAEYNILFMLSFTTPAFDSEVPPSFGTLLATVN VTLNMLGELDKKKDPFTLAAGPSPQQEENKTLKPLLMFTMENCFYLLISQAVRYLKDPAVHSRDKQRMKQELSSELSTLL SSLSRYFRRGGPSSPAGGLLPSPQGKPSSKLGPEGQEPLFQLVQTFVRHVQR |
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