Gene
| Gene Model ID | habu1_s997_g03510 |
|---|---|
| Locus | habu1_scaffold997 : 655991 ... 658040 : - |
| To GenomeBrowser | habu1_scaffold997:655991..658040 |
| Genes list of scaffold | habu1_scaffold997 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| endonuclease mitochondrial | GO:0003676 GO:0005739 GO:0006309 GO:0016787 GO:0034612 GO:0043065 GO:0046677 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s997_g03510.t1 | 1 | 1 | Endonuclease_NS | 82 | 284 | 0.0 | 206.5 | 0.0 | 0.0 | 206.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s997_g03510.t1 | gi|543367902|ref|XP_005527301.1| | PREDICTED: endonuclease G, mitochondrial [Pseudopodoces humilis] | 0.0 |
| habu1_s997_g03510.t1 | gi|542164007|ref|XP_005490636.1| | PREDICTED: endonuclease G, mitochondrial [Zonotrichia albicollis] | 0.0 |
| habu1_s997_g03510.t1 | gi|449478137|ref|XP_002194775.2| | PREDICTED: endonuclease G, mitochondrial [Taeniopygia guttata] | 0.0 |
| habu1_s997_g03510.t1 | gi|118099296|ref|XP_415487.2| | PREDICTED: endonuclease G, mitochondrial isoform X3 [Gallus gallus] | 0.0 |
| habu1_s997_g03510.t1 | gi|530600103|ref|XP_005293543.1| | PREDICTED: endonuclease G, mitochondrial [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.9 |
| Venom grand-1 | 8.2 |
| Pit, infrared sensing | 7.8 |
| Nose | 6.9 |
| Brain-1 | 1.7 |
| Eye | 7.4 |
| fetal fibroblast | 5.5 |
| venom gland-2 | 11.0 |
| Brain-2 | 1.8 |
| Spleen | 7.0 |
| Lung | 7.7 |
| Liver | 27.9 |
| Kidney | 20.8 |
| Pancreas | 20.9 |
| Small intestine | 49.0 |
| Large intestine | 17.7 |
| Stomach | 23.6 |
| heart | 15.9 |
| ovary | 20.8 |
| cheek muscle | 35.6 |
Transcript
| Transcript ID | habu1_s997_g03510.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03510.t1 gaaagcttccttgttgtcactttcccttcttccaacgttccattcctttgatcccggcgcgttccatccgggagcgcctc tgcggacgggatgcggcgctggtggtgcaacctggcgcccgccgcggcctcgctggccctcgggctgggcgtgggcgcgg tctgggccggggggcagagccggggctcgccgtccgcggaggggctgctggcgcggctgcccgtcgtgccggtggcggcg gcggcggcggcgtcctccttggaggtggcccggggcgggagcggcgagctggccaagtacggcctgccggggctgtcaca gctgcggagccgcgactcctacgtgctgtgctacgacccgcgagcccggagcgccctctgggtggtggagcggctggacg cggcggccctgcgcggctcctcggagcgggccgcctgcgacttccgcgaggacgactcggtccacccctatcaccgggcc agcaacgcggattaccggggcagcggcttcgaccgaggccacctggccgccgccgccaaccacaagtggagccagaaagc catgggggacaccttctacctgagcaacatcgccccgcagaatcctcatttaaatcaaaacgcctggaataacttggaaa aatattgtcgaagtttaacgaagactcatcagaatgtttatgtctgcaccggcccgcttttcctacccaggatggagccg gatgggaagatgtacgtgaagtaccaagtgatcgggcggaatcacgtggccgtccccacccacttcttcaaggtgctgat cctggaaaagccgagcggggaggtggagctgcagtcctacgtcctgcccaacgcccccgtggacgagcagacccccttgc agcgcttcctggtccccatcgagagcatagagcgctcatccggccttctctttgtccccaacatcatgaaaaagaccagc aagttgaaagcaatcgctgctgggagcgccccatgagaacccccggcagcgagaggcgtccctcaaagcccctgaaagca ggcggtcctcagctggcaatcccgagctgaaaggtccgttgctaagcgagacaggggttaagtccattctgccccatttt acgaccttccttgccatagttattaagtggatcgttgcagttaagttagtaacatgtgaaaatctggcttcacagaatca cttaacgaccgtgtgactgacgactgcagtggttcacttaaggtcataaaatggggcaaaactcaacaaatg |
|
Protein
| Protein ID | habu1_s997_g03510.t1 |
|---|---|
| Definition | - |
>habu1_s997_g03510.t1 MRRWWCNLAPAAASLALGLGVGAVWAGGQSRGSPSAEGLLARLPVVPVAAAAAASSLEVARGGSGELAKYGLPGLSQLRS RDSYVLCYDPRARSALWVVERLDAAALRGSSERAACDFREDDSVHPYHRASNADYRGSGFDRGHLAAAANHKWSQKAMGD TFYLSNIAPQNPHLNQNAWNNLEKYCRSLTKTHQNVYVCTGPLFLPRMEPDGKMYVKYQVIGRNHVAVPTHFFKVLILEK PSGEVELQSYVLPNAPVDEQTPLQRFLVPIESIERSSGLLFVPNIMKKTSKLKAIAAGSAP |
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