publication
For those who utilize our genome and transcriptome data, please cite:
Lewin TD, Sakagami T, Shimizu K, Kao LJ, Chiu YL, Liao IJY, Chen ME, Hisata K, Endo K, Satoh N, Holland PWH, Wong YH*, Luo YJ*
Brachiopod genome unveils the evolution of BMP signalling in bilaterian body patterning.
Nature Communications, under revision.
Brachiopod genome unveils the evolution of BMP signalling in bilaterian body patterning.
Nature Communications, under revision.
Chromosome-level genome (v3.0)
| lan_genome_v3.0.fa.gz |
Functional annotation files
| lan_v3.0.diamond.blastp.out.gz | UniProt best-hit annotation: Diamond blast against UniProt |
| lan_v3.0.domtblout.gz | Pfam annotation |
| lan_v3.0_interproscan.tsv.gz | InterProScan annotation |
| lan_v3.0.eggnog.emapper.annotations.gz | EggNOG annotation |
| lan_v3.0.eggnog.emapper.hits.gz | EggNOG annotation |
| lan_v3.0.eggnog.emapper.seed_orthologs.gz | EggNOG annotation |
| lan_v3.0_kofam.tsv.gz | KOfam annotation |
Structural annotation files
| lan_v3.0_braker.gff.gz | BRAKER gene model annotation, GFF format |
| lan_v3.0_braker.gtf.gz | BRAKER gene model annotation, GTF format |
| lan_v3.0_braker.log.gz | BREAKE annotation log |
| lan_v3.0_cds.fasta.gz | coding sequences |
| lan_v3.0_pep.fasta.gz | protein sequences |
| lan_v3.0_repeat.gff.gz | RepeatMasker annotation, GFF format |
| lan_v3.0_repeat.tbl.gz | RepeatMasker statistics |